CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:500..1351. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 159.073 bits (401), Expect = 2.931e-38
Identity = 91/216 (42.13%), Postives = 120/216 (55.56%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 692
            V+ VK+QGACGSCW+FS TGALE A  ++TG+++SL+EQQLVDC  + +       + GC GGL + AFEYIL   G+  E  YPY G D G CKF   K    V + + I+  DE+ M   +  + P++           Y  G+     C K  D   H VL VGYG            PYWI+KNSWG  WG NGY+ I  G+N+CG+ +  S
Sbjct:  129 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKD-GYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGI-------PYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACAS 329          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSEP_RICCO (Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.828e-38
Identity = 91/218 (41.74%), Postives = 122/218 (55.96%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKI-AAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGV 677
            R  GAVT VKDQG CGSCW+FS   A+EG + + T +LVSLSEQ+LVDCD +         + GCNGGLM+ AFE+I + GG+  E +YPY   D G+C   K    A ++     +  +++      V + P++V I+A     Q Y  GV     CG  LDHGV IVGYG++           YW +KNSWG  WGE GY ++  G      +CG+
Sbjct:  133 RKKGAVTSVKDQGQCGSCWAFSTIVAVEGINQIKTNKLVSLSEQELVDCDTD--------QNQGCNGGLMDYAFEFIKQRGGITTEANYPYEAYD-GTCDVSKENAPAVSIDGHENVPENDENALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-SCGTELDHGVAIVGYGTT------IDGTKYWTVKNSWGPEWGEKGYIRMERGISDKEGLCGI 334          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.828e-38
Identity = 81/218 (37.16%), Postives = 127/218 (58.26%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 710
            VT VK+QG CG+CW+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE+G++++    N CG+ + ++S A I+
Sbjct:  124 VTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNSNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVE-------NNIPYWTFKNTWGTDWGEDGFFRVQQNINACGMRNELASTAVIY 323          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.000e-38
Identity = 90/216 (41.67%), Postives = 120/216 (55.56%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 692
            V+ VK+QGACGSCW+FS TGALE A  +++G++++L+EQQLVDC    +       + GC GGL + AFEYIL   G+  E  YPY G + G CKF+  K  A V N  ++  +DE  M   +  + P++           Y  GV     C K  D   H VL VGYG             YWI+KNSWG NWG NGY+ I  G+N+CG+ +  S
Sbjct:  127 VSPVKNQGACGSCWTFSTTGALESAVAIASGKMMTLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKN-GQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQ-------NGLLYWIVKNSWGSNWGNNGYFLIERGKNMCGLAACAS 327          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.530e-38
Identity = 81/218 (37.16%), Postives = 126/218 (57.80%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 710
            VT VK+QG CG+CW+F+   +LE    +   +L++LSEQQ++DCD           D+GCNGGL+++AFE I+K GGV+ E DYPY   D  +C+ + +K    V + +  I+  E+++   L   GP+ + I+A  +  Y  G+   Y     L+H VL+VGYG            PYW  KN+WG +WGE G++++    N CG+ + ++S A I+
Sbjct:  124 VTSVKNQGMCGACWAFATLASLESQFAIKHNQLINLSEQQMIDCDF---------VDAGCNGGLLHTAFEAIIKMGGVQLESDYPYE-ADNNNCRMNTNKFLVQVKDCYRYITVYEEKLKDLLRLVGPIPMAIDAADIVNYKQGI-IKYCFNSGLNHAVLLVGYGVE-------NNIPYWTFKNTWGTDWGEEGFFRVQQNINACGMRNELASTAVIY 323          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.530e-38
Identity = 87/220 (39.55%), Postives = 121/220 (55.00%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 692
            R+ G VT V++QG CGSCW+F+A GA+EG  F  TG L  LS Q L+DC            + GC  G  + AFEY+LK  G+E E  YPY G D G C++     +A ++++  +  +E  +   +   GP++  I+A     + Y GG+     C  Y ++H VL+VGYGS G          YW+IKNSWGE WG NGY +I     N CG+ S+ S
Sbjct:  121 REEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVG-------NKGCQSGTAHQAFEYVLKNKGLEAEATYPYEGKD-GPCRYRSENASANITDYVNLPPNELYLWVAVASIGPVSAAIDASHDSFRFYNGGIYYEPNCSSYFVNHAVLVVGYGSEGDVK---DGNNYWLIKNSWGEEWGMNGYMQIAKDHNNHCGIASLAS 329          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.528e-38
Identity = 92/221 (41.63%), Postives = 126/221 (57.01%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINAVWMQT---YIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICM-GRNVCGVDSMVS 692
            R+ G VT VK QG+CGSCW+FSA GALEG   L TG+LVSLS Q LVDC  E   E+YG  + GC GG M  AF+YI+    ++ E  YPY   D   C +D    AA  S +  +   DE+ +   +   GP++VGI+     +   Y  GV     C + ++HGVL+VGYG+          K YW++KNSWG ++G+ GY ++    +N CG+ S  S
Sbjct:  120 REKGCVTNVKYQGSCGSCWAFSAEGALEGQLKLKTGKLVSLSAQNLVDCSTE---EKYG--NKGCGGGFMTEAFQYIIDT-SIDSEASYPYKAMD-EKCLYDPKNRAATCSRYIELPFGDEEALKEAVATKGPVSVGIDDASHSSFFLYQSGVYDDPSCTENMNHGVLVVGYGT-------LDGKDYWLVKNSWGLHFGDQGYIRMARNNKNHCGIASYCS 326          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.455e-37
Identity = 86/225 (38.22%), Postives = 126/225 (56.00%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIHTTS 719
            RD  +VT VK Q  CGSCW+FSA   +E  + +     + LSEQQLVDCD           ++GCNGGLM+ AFE I++AGG+  E  YPYTG D G CK + ++       ++     E ++   L + GP++V I+ V +  Y  GV+        L+HGVL+VGYG          +  YW +KNSWG +WGE G+++I    N CG+ +  ++ A + ++S
Sbjct:  140 RDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD---------KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVD-GVCK-NTTRYVQLSGCYAYDLRSEKKLRQVLHEKGPVSVAIDVVDLTNYKSGVAKHCSVDHGLNHGVLLVGYGQE-------NDVKYWTLKNSWGSDWGEQGFFRIKRDVNSCGILNQFAASAILSSSS 346          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSEP_PHAVU (Vignain OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.900e-37
Identity = 91/224 (40.62%), Postives = 126/224 (56.25%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 692
            R  GAVT VKDQG CGSCW+FS   A+EG + + T +LV+LSEQ+LVDCD E         + GCNGGLM SAFE+I + GG+  E +YPY   +G       + +A ++     + ++++      V + P++V I+A     Q Y  GV     C   L+HGV IVGYG++           YWI++NSWG  WGE+GY  I M RN+      CG+  + S
Sbjct:  135 RKKGAVTDVKDQGQCGSCWAFSTVVAVEGINQIKTNKLVALSEQELVDCDKE--------ENQGCNGGLMESAFEFIKQKGGITTESNYPYKAQEGTCDASKVNDLAVSIDGHENVPANDEDALLKAVANQPVSVAIDAGGSDFQFYSEGVFTG-DCSTDLNHGVAIVGYGTT------VDGTNYWIVRNSWGPEWGEHGY--IRMQRNISKKEGLCGIAMLPS 341          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.900e-37
Identity = 90/216 (41.67%), Postives = 119/216 (55.09%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 692
            V+ VK+QGAC SCW+FS TGALE A  +++G+++SL+EQQLVDC    +       + GC GGL + AFEYIL   G+  E  YPY G D  SC+F+  K  A V N  ++  +DE  M   +  + P++           Y  GV     C K  D   H VL VGYG             YWI+KNSWG  WGENGY+ I  G+N+CG+ +  S
Sbjct:  127 VSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFN-------NHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKD-SSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQ-------NGLLYWIVKNSWGSQWGENGYFLIERGKNMCGLAACAS 327          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
CATH_HUMAN2.931e-3842.13Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
CYSEP_RICCO3.828e-3841.74Vignain OS=Ricinus communis GN=CYSEP PE=1 SV=1[more]
CATV_NPVAC3.828e-3837.16Viral cathepsin OS=Autographa californica nuclear ... [more]
CATH_RAT5.000e-3841.67Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
CATV_NPVRO6.530e-3837.16Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATJ_MOUSE6.530e-3839.55Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATS_RAT8.528e-3841.63Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
CATV_GVXN1.455e-3738.22Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CYSEP_PHAVU1.900e-3740.63Vignain OS=Phaseolus vulgaris PE=2 SV=2[more]
CATH_MOUSE1.900e-3741.67Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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