CF832441

Overview
NameCF832441
Unique NameCF832441
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:500..1351. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.608e-36
Identity = 90/230 (39.13%), Postives = 121/230 (52.61%), Query Frame = 3
Query:    3 PSSLPTIFLLTLTVRD---------HGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPY---TGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKI 650
            P S+P      L V D          GAVTGVKDQG CGSCW+FS   ++EG + + TG LVSLSEQ+L+DCD         + + GC GGLM++AFEYI   GG+  E  YPY    GT   +     S +   +     + ++ ++  A  V + P++V + A       Y  GV     CG  LDHGV +VGYG      +    K YW +KNSWG +WGE GY ++
Sbjct:  118 PPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCD--------TADNDGCQGGLMDNAFEYIKNNGGLITEAAYPYRAARGTCNVARAAQNSPVVVHIDGHQDVPANSEEDLARAVANQPVSVAVEASGKAFMFYSEGVFTG-DCGTELDHGVAVVGYG------VAEDGKAYWTVKNSWGPSWGEQGYIRV 332          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 2.101e-36
Identity = 83/217 (38.25%), Postives = 117/217 (53.92%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAV--WMQTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSM 686
            R+ G VT V+ QG C SCW+F  TGA+EG  F  TG+L+ LS Q L+DC            + GC  G   +AF+Y+L  GG+E E  YPY   + G C+++    +A ++ F V+   ED +   +   GP+A G++ +    + Y  GV     C  Y++H VL+VGYG  G          YW+IKNSWG+ WG  GY KI   R N C + S+
Sbjct:  132 RNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDCSKP-------QGNRGCLWGNTYNAFQYVLHNGGLEAEATYPYERKE-GVCRYNPKNSSAKITGFVVLPESEDVLMDAVATKGPIATGVHVISSSFRFYQKGVYHEPKCSSYVNHAVLVVGYGFEG---NETDGNNYWLIKNSWGKRWGLRGYMKIAKDRNNHCAIASL 337          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.743e-36
Identity = 89/225 (39.56%), Postives = 126/225 (56.00%), Query Frame = 3
Query:   33 TLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            ++  R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E         + GC GG M +AF+Y+ + GG++ E  YPY G D  SC ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C +  ++H VL+VGYG+        K   +WIIKNSWGE+WG  GY  +   + N CG+ +M S
Sbjct:  118 SIDYRKKGYVTPVKNQGQCGSCWAFSSAGALEGQLKKKTGKLLALSPQNLVDCVTE---------NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQD-ESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQ-------KGSKHWIIKNSWGESWGNKGYALLARNKNNACGITNMAS 325          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.583e-36
Identity = 87/217 (40.09%), Postives = 119/217 (54.84%), Query Frame = 3
Query:   54 GAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG-RNVCGVDSMVS 692
            G VT VK+QG C S W+FSATG+LEG  F  TG LV LSEQ L+DC          +    C+GG M +AF+Y+   GG+  E+ YPY G  G  C++     AA V +F  I   E+ +   + K GP++V ++A     Q Y  G+     C + +L+H VL+VGYG  G          YW++KNSWGE WG  GY KI     N CG+ ++ +
Sbjct:  124 GYVTPVKNQGYCASSWAFSATGSLEGQMFKKTGRLVPLSEQNLLDC-------MGSNVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIG-PGRKCRYHAENSAANVRDFVQIPGREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYGFEG---EESDGNSYWLVKNSWGEEWGMKGYIKIAKDWNNHCGIATLAT 329          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.583e-36
Identity = 80/219 (36.53%), Postives = 127/219 (57.99%), Query Frame = 3
Query:   60 VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKYLDHGVLIVGYG-SSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 710
            VT VK+QG CG+CW+F+  G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E ++  GG++ E DYPY   + G C+ + +K    V   +  ++  E+++   L   GP+ V I+A  +  Y  G+   Y     L+H VL+VGYG  +G         P+WI+KN+WG +WGE GY+++    N CG+ + + S A I+
Sbjct:  125 VTSVKNQGMCGACWAFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDVGCDGGLLHTAYEAVMNMGGIQAENDYPYE-ANNGPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAIDASDIVGYKRGI-IRYCENHGLNHAVLLVGYGVENGI--------PFWILKNTWGADWGEQGYFRVQQNINACGIKNELPSSAEIY 324          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.680e-36
Identity = 91/225 (40.44%), Postives = 123/225 (54.67%), Query Frame = 3
Query:   33 TLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            ++  R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G D  +C ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C    L+H VL VGYG         K K +WIIKNSWGENWG  GY  +   + N CG+ ++ S
Sbjct:  119 SIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD-ENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQ-------KGKKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 326          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 7.982e-36
Identity = 91/221 (41.18%), Postives = 120/221 (54.30%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVI-SSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICGK-YLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 692
            R  G VT VK+QG CGSCW+FS+ GALEG     TG+L++LS Q LVDC  E D         GC GG M +AF+Y+ K  G++ E  YPY G D  SC ++ +  AA    +  I   +E  +   + + GP++V I+A     Q Y  GV     C    L+H VL VGYG         K   +WIIKNSWGENWG  GY  +   + N CG+ ++ S
Sbjct:  123 RKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDCVSEND---------GCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD-ESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPISVAIDASLTSFQFYSKGVYYDENCNSDNLNHAVLAVGYGIQ-------KGNKHWIIKNSWGENWGNKGYILMARNKNNACGIANLAS 326          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 1.043e-35
Identity = 81/180 (45.00%), Postives = 109/180 (60.56%), Query Frame = 3
Query:   33 TLTVRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTG---ELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINA--VWMQTYIGGVSCPYICG-KYLDHGVLIVGYGS 554
            T+  R  GAVT +K+QG CG CWSFS TG+ EGAHF+++G   +LVSLSEQ L+DC      + YG+  +GC GGLM  AFEYI+   G++ E  YPYT  DG  CKF  S I A + ++  ++S  +    +   + P++V I+A     Q Y  G+     C    LDHGVL+VGYGS
Sbjct:  114 TVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCS-----KSYGN--NGCEGGLMTLAFEYIINNKGIDTESSYPYTAEDGKECKFKTSNIGAQIVSYQNVTSGSEASLQSASNNAPVSVAIDASNESFQLYESGIYYEPACSPTQLDHGVLVVGYGS 286          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.362e-35
Identity = 82/224 (36.61%), Postives = 125/224 (55.80%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAV-SNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 710
            R    VT VK+QG CG+CW+F+  G+LE    +    L++LSEQQ +DCD           ++GC+GGL+++AFE  ++ GGV+ E DYPY  T  G C+ + ++    V S    I   E+++   L   GP+ V I+A  +  Y  G+     C  + L+H VL+VGY             PYWI+KN+WG +WGE+GY+++    N CG+ + + S A I+
Sbjct:  120 RQFNKVTSVKNQGVCGACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFESAMEMGGVQMESDYPYE-TANGQCRINPNRFVVGVRSCRRYIVMFEEKLKDLLRAVGPIPVAIDASDIVNYRRGIMRQ--CANHGLNHAVLLVGYAVE-------NNIPYWILKNTWGTDWGEDGYFRVQQNINACGIRNELVSSAEIY 324          
BLAST of CF832441 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.778e-35
Identity = 85/219 (38.81%), Postives = 125/219 (57.08%), Query Frame = 3
Query:   45 RDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEEYGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGV-SCPYICGKYLDHGVLIVGYG--SSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMG----RNVCGV 677
            RD+GAV  VK+Q  CGSCWSF+A   +EG + + TG LVSLSEQ+++DC          +   GC GG +N A+++I+   GV  E++YPY     G+C  +    +A ++ +S +  ++++     V + P+A  I+A    Q Y GGV S P  CG  L+H + I+GYG  SSG          YWI++NSWG +WGE GY ++  G      VCG+
Sbjct:  130 RDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDC----------AVSYGCKGGWVNKAYDFIISNNGVTTEENYPYLAYQ-GTCNANSFPNSAYITGYSYVRRNDERSMMYAVSNQPIAALIDASENFQYYNGGVFSGP--CGTSLNHAITIIGYGQDSSG--------TKYWIVRNSWGSSWGEGGYVRMARGVSSSSGVCGI 327          
The following BLAST results are available for this feature:
BLAST of CF832441 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 176
Match NameE-valueIdentityDescription
CYSP1_HORVU1.608e-3639.13Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
CATQ_RAT2.101e-3638.25Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
CATK_MOUSE2.743e-3639.56Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
TEST2_MOUSE3.583e-3640.09Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATV_NPVAP3.583e-3636.53Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATK_PIG4.680e-3640.44Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATK_CANFA7.982e-3641.18Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
CYSP4_DICDI1.043e-3545.00Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATV_NPVOP1.362e-3536.61Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
BROM1_ANACO1.778e-3538.81Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832441 ID=CF832441; Name=CF832441; organism=Citrus sinensis; type=EST; length=853bp
CTCCTTCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGTTCGTGAT
CACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTG
GTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGG
GCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAG
TGTGATCCAGAGGAATATGGTTCATGTGACTCTGGGTGCAATGGTGGGCT
AATGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAG
AGAAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGAC
AAAAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGA
TGAAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGCAGTGG
GTATCAATGCCGTTTGGATGCAAACATATATTGGAGGAGTTTCATGCCCA
TACATTTGCGGGAAGTATTTGGATCATGGAGTGCTTATCGTGGGCTATGG
ATCCTCAGGTTTCGCCCCGATCAGATTCAAGGAGAAGCCTTACTGGATCA
TAAAGAACTCCTGGGGAGAGAACTGGGGAGAGAATGGATATTATAAGATC
TGCATGGGTCGCAATGTCTGTGGGGTCGACTCCATGGTCTCATCTGTAGC
TGCTATCCATACAACCTCAAGCTAGACATTATGGAGGTTGTGCTAGGCAA
GTGGAGCTTCTGTACCTAGATATTATAGGATATCCTTTTAAATATCCGTC
TGCAATTATAACGATGCCTACATGCCTGGGCTGAGGCATGAACTTTCTAT
GCT
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