CF832442

Overview
NameCF832442
Unique NameCF832442
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length682
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.005e-19
Identity = 56/133 (42.11%), Postives = 74/133 (55.64%), Query Frame = -1
Query:  302 EKDYPYTGTDGGSCKFDKSKIAAAVS---NFSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 679
            E+ YPYTG DGG CKF    I   V    N ++ + DE + A  LV+  P++V    V   + Y  GV     CG     ++H VL VGYG          + PYW+IKNSWG  WG+NGY+K+ MG+N+CGV
Sbjct:  226 EEAYPYTGKDGG-CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGVFTSNTCGNTPMDVNHAVLAVGYGVED-------DVPYWLIKNSWGGEWGDNGYFKMEMGKNMCGV 348          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.189e-18
Identity = 51/128 (39.84%), Postives = 73/128 (57.03%), Query Frame = -1
Query:  302 EKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 679
            E DYPY G +  +C+   SK+A  +S+ +     DE ++   L K+GP+AV I+ V +  Y  G++   +C    L+H VL+VGYG          + PYWI KNSWG NWGENGY++     N CG+
Sbjct:  209 EIDYPYQGIEY-ACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIIDYRSGIAT--VCNDNGLNHAVLLVGYGIEN-------DTPYWIFKNSWGSNWGENGYFRARRNINACGM 326          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.777e-18
Identity = 53/143 (37.06%), Postives = 74/143 (51.75%), Query Frame = -1
Query:  302 EKDYPYTG-TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYL-DHGVLIVGYGS-------------SGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 679
            EKDYP+ G      C   K +  A + +F ++ ++E ++A  L  +GP+ V IN   +Q Y  GV  + P  C   L DH VL+VG+GS             S   P      PYWI+KNSWG  WGE GY+++  G N CG+
Sbjct:  212 EKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGAQWGEKGYFRLHRGSNTCGI 354          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.510e-17
Identity = 50/141 (35.46%), Postives = 72/141 (51.06%), Query Frame = -1
Query:  302 EKDYPYTG-TDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGV--SCPYICGKYL-DHGVLIVGYGSS-----------GFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGV 679
            EKDYP+ G      C   K    A + +F ++  +E ++A  L   GP+ V IN   ++ Y  GV  + P  C  +L DH VL+VG+G S           G  P   +  P+WI+KNSWG  WG  GY+++  G N CG+
Sbjct:  212 EKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPITVTINMKLLKLYKKGVIEATPTSCDPFLVDHSVLLVGFGKSESVADRRAGAAGAQPQSRRSIPFWILKNSWGTKWGXGGYFRLYRGNNTCGI 352          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATV_NPVHC (Viral cathepsin OS=Hyphantria cunea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.575e-17
Identity = 50/139 (35.97%), Postives = 76/139 (54.68%), Query Frame = -1
Query:  269 EKDYPYTGTDGGSCKFDKSKIAAAVSN-FSVISSDEDQMAANLVKHGPLAVGINAVWMQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVSSVAAIH 679
            E DYPY G+DG +C+ D +K    V   +  I+  E+++   L   GP+ V I+A  +  Y  G+     C  Y  +H VL+VGYG            PYWI+KN+WGE+WGE GY+++    N CG+ + + + A I+
Sbjct:  196 ENDYPYEGSDG-NCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAIDASDIVNYRRGIM--RYCSNYGFNHAVLLVGYGVEN-------NVPYWILKNTWGEDWGEQGYFRVQQNINACGIRNELLASAEIY 324          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17
Identity = 53/131 (40.46%), Postives = 71/131 (54.20%), Query Frame = -1
Query:  302 EKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPLAVGINAVW--MQTYIGGVSCPYICGKY-LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGV 679
            EK YPY G D  SC F+K+ I A  + F  +   DE++M   +   GP++V I+A     Q Y  GV     C +  LDHGVL+VGYG+            YW++KNSWG  WGE GY K+   + N CG+
Sbjct:  207 EKSYPYEGIDD-SCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESG------MDYWLVKNSWGTTWGEQGYIKMARNQNNQCGI 330          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CATH_BOVIN (Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.737e-17
Identity = 55/137 (40.15%), Postives = 72/137 (52.55%), Query Frame = -1
Query:  287 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVIS-SDEDQMAANLVKHGPL--AVGINAVWMQTYIGGVSCPYICGKYLD---HGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 679
            E  YPY G DG  CK+  SK  A V + + I+ +DE+ M   +  H P+  A  + A +M  Y  G+     C K  D   H VL VGYG         K  PYWI+KNSWG NWG  GY+ I  G+N+CG+ +  S
Sbjct:  202 EDTYPYRGQDG-DCKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTADFMM-YRKGIYSSTSCHKTPDKVNHAVLAVGYGEE-------KGIPYWIVKNSWGPNWGMKGYFLIERGKNMCGLAACAS 329          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.493e-17
Identity = 53/141 (37.59%), Postives = 74/141 (52.48%), Query Frame = -1
Query:  287 EKDYPYTGTDGGSCKFDKSKIAAAVS--NFSVISSDEDQMAANLVKHGPLAVGINAVWM--QTYIGGVSCPYICGKYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNV------CGVDSMVS 679
            ++DYPY   D G C  DK+     V+   +  +  D+++     V H P++V I A     Q Y  GV     CG  LDHGV++VGYGS+         + YWII+NSWG NWG++GY K  + RN+      CG+  M S
Sbjct:  215 DQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGVMTG-TCGISLDHGVVVVGYGSTS-------GEDYWIIRNSWGLNWGDSGYVK--LQRNIDDPFGKCGIAMMPS 345          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: CYSP2_HOMAM (Digestive cysteine proteinase 2 OS=Homarus americanus GN=LCP2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.786e-17
Identity = 53/136 (38.97%), Postives = 73/136 (53.68%), Query Frame = -1
Query:  287 EKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKH-GPLAVGINAVW--MQTYIGGVSCPYICG-KYLDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGR-NVCGVDSMVS 679
            E  YPY   DG SC+FD + +AA  S  + I+S  +      V+  GP++V I+A     Q Y  GV     C   YLDH VL VGYGS G        + +W++KNSW  +WG+ GY K+   R N CG+ ++ S
Sbjct:  192 EAAYPYEARDG-SCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVGYGSEG-------GQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIATVAS 319          
BLAST of CF832442 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 9.786e-17
Identity = 51/138 (36.96%), Postives = 74/138 (53.62%), Query Frame = -1
Query:  287 EKDYPYTGTDGGSCKFDKSKIAAAVSN---FSVISSDEDQMAANLVKHGPLAVGINAVW-MQTYIGGVSCPYICGKY---LDHGVLIVGYGSSGFAPIRFKEKPYWIIKNSWGENWGENGYYKICMGRNVCGVDSMVS 679
            EK YPYTG D  +CKF    +   V N    ++ + DE + A  LV+  P+++    +   + Y  GV     CG     ++H VL VGYG     P       YW+IKNSWG +WG+ GY+K+ MG+N+CG+ +  S
Sbjct:  226 EKAYPYTGKDE-TCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGVP-------YWLIKNSWGADWGDKGYFKMEMGKNMCGIATCAS 353          
The following BLAST results are available for this feature:
BLAST of CF832442 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
ALEUL_ARATH8.005e-1942.11Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
CATV_NPVST5.189e-1839.84Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
CATW_HUMAN6.777e-1837.06Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CATW_FELCA1.510e-1735.46Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
CATV_NPVHC2.575e-1735.97Viral cathepsin OS=Hyphantria cunea nuclear polyhe... [more]
CATL_SARPE4.393e-1740.46Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATH_BOVIN5.737e-1740.15Cathepsin H OS=Bos taurus GN=CTSH PE=2 SV=1[more]
CPR1_ARATH7.493e-1737.59Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CYSP2_HOMAM9.786e-1738.97Digestive cysteine proteinase 2 OS=Homarus america... [more]
ALEU_ARATH9.786e-1736.96Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N22_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832442 ID=CF832442; Name=CF832442; organism=Citrus sinensis; type=EST; length=682bp
TTTTTTTTTTTTTTTTTAAAAAAAGAAAATATTAATACCATCTTCAATAA
CAATTCTGTAGCATGGTTAACTATAAAATAGATAAATATTACATTCTGAC
ATGACATATGCTTAAATATTACAAGAGCATAGAAAGTTCATGCCTCAGCC
CAGGCATGTAGGCATCGTTATAATTGCAGACGGATATTTAAAAGGATATC
CTATAATATCTAGGTACAGAAGCTCCACTTGCCTAGCACAACCTCCATAA
TGTCTAGCTTGAGGTTGTATGGATAGCAGCTACAGATGAGACCATGGAGT
CGACCCCACAGACATTGCGACCCATGCAGATCTTATAATATCCATTCTCT
CCCCAGTTCTCTCCCCAGGAGTTCTTTATGATCCAGTAAGGCTTCTCCTT
GAATCTGATCGGGGCGAAACCTGAGGATCCATAGCCCACGATAAGCACTC
CATGATCCAAATACTTCCCGCAAATGTATGGGCATGAAACTCCTCCAATA
TATGTTTGCATCCAAACGGCATTGATACCCACTGCCAGAGGGCCATGTTT
CACCAAATTTGCAGCCATTTGATCTTCATCAGAGGAAATAACACTGAAAT
TAGATACAGCTGCAGCAATTTTGCTTTTGTCAAATTTGCAGGAACCACCG
TCGGTCCCAGTGTAAGGGTAGTCCTTCTCTCG
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