CF832445

Overview
NameCF832445
Unique NameCF832445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.918e-42
Identity = 96/177 (54.24%), Postives = 108/177 (61.02%), Query Frame = -3
Query:  187 LKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGK--PLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNG-TPKSKVVIADSGELP 708
            + E   K +FD+ I GKPAGRIV  L+   VPKTAENF  LC G  G  KS    PL YKGS FHR+I SFM Q           GESIYGEKF DENF LKH  P LLSMANAG +TNGSQ FIT V T  LDG+HVVFG+V+ G  +V  +E         P  +V I D G LP
Sbjct:    1 MSETRPKTFFDISIGGKPAGRIVFELYSDVVPKTAENFLKLCEGNSGFAKSKPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQGKRLVRTIENNATDEADKPAKEVKIEDCGVLP 177          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.505e-42
Identity = 90/172 (52.33%), Postives = 108/172 (62.79%), Query Frame = -3
Query:  190 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 705
            KE    V+FD+    +P GRI M LF   VPKTAENFRALCTGEKG G       +K S FHR+IP F+ Q           G SIYG+KF DENF +KHTGPGLLSMAN G DTN SQFFIT      LD +HVVFG V  GMD V K+E+ G   G+   +++I + G++
Sbjct:  921 KETNPVVFFDICADDEPLGRITMELFSNIVPKTAENFRALCTGEKGFG-------FKSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDENFDVKHTGPGLLSMANRGQDTNNSQFFITLKKAERLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVSRRIIITECGQI 1085          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.505e-42
Identity = 93/172 (54.07%), Postives = 111/172 (64.53%), Query Frame = -3
Query:  187 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGK--PLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGT--PKSKVVIADSGELP 690
            K YFD+ I G P GRIV  L+   VPKTAENF  LC G+ G+ KS    PL YKGS FHR+I  FM+Q           GESIYGEKF DENF++KH  P LLSMANAGP+TNGSQ FIT V T  LDG+HVVFG+V+ G  +V  +E +  ++GT  P   V +   G LP
Sbjct:    5 KAYFDISIGGTPKGRIVFELYKDVVPKTAENFLKLCEGKSGMAKSKPDVPLSYKGSIFHRVIKDFMIQFGDFTNFDGTGGESIYGEKFEDENFEIKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIEGKRLVRLIEKQQTEDGTDKPMHDVKVEGCGLLP 176          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.505e-42
Identity = 89/164 (54.27%), Postives = 104/164 (63.41%), Query Frame = -3
Query:  196 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSG 687
            V+FDV+  G    +IV  L+   VPKTA NFR L TG +G G       YKGS FHR+I  FM Q           G+SIYGEKF DENFKLKHT P LLSMANAGP+TNGSQFFIT V   WLDG+HVVFG+V+ G D +   +    Q G PK+ + I DSG
Sbjct:    4 VFFDVQFGGDAPKKIVFKLYDDVVPKTAANFRELATGSRGFG-------YKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEVVDGFDTLELFKKNSSQQGKPKTTIKIVDSG 160          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.121e-41
Identity = 100/188 (53.19%), Postives = 115/188 (61.17%), Query Frame = -3
Query:  190 ITNKVYFDVEIAG-------KP-------AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL--SGMDVVFKVEAEGRQNGTPK--SKVVIADSGEL 699
            I +KV+FD+E  G       KP       +GRI   L+   VPKTA NF+ LCTG+ G G       YKGS+FHRIIP FMLQ           G+SIYGEKF DENF  KH  PGLLSMANAGP+TNGSQFF+TTV TSWLDGRHVVFG+V     M VV  +EA G  +G  +   K  I D G L
Sbjct:   43 IMSKVFFDLEWEGPVLGPNNKPTSEIKAQSGRINFTLYDDVVPKTARNFKELCTGQNGFG-------YKGSSFHRIIPEFMLQGGDFTRGNGTGGKSIYGEKFADENFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHVVFGEVADDESMKVVKALEATGSSSGAIRYSKKPTIVDCGAL 223          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 3.618e-41
Identity = 89/172 (51.74%), Postives = 108/172 (62.79%), Query Frame = -3
Query:  190 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 705
            KE    V+FDV   G+P GRI M LF   VP+TAENFRALCTGEKG G       +K S FHR+IP F+ Q           G+SIYG+KF DENF +KHTGPGLLSMAN G +TN SQF IT      LD +HVVFG V  GMD V K+E+ G   G+   ++ I + G++
Sbjct: 3060 KETNPVVFFDVCADGEPLGRITMELFSNIVPRTAENFRALCTGEKGFG-------FKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVCRRITITECGQI 3224          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYP1_BRUMA (Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia malayi GN=CYP-1 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.618e-41
Identity = 92/174 (52.87%), Postives = 111/174 (63.79%), Query Frame = -3
Query:  190 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGEL 705
            K+   +V+ DV I G  AGRIVM L+    P+T  NF  LCTG  G GK SGKPLHYKGSTFHR+I +FM+Q           GESIYG  F DE F +KH  P ++SMAN GP+TNGSQFFITT     L+  HVVFGKV+SG +VV K+E  +      P + VVI + GEL
Sbjct:    3 KKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGEL 176          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.725e-41
Identity = 92/172 (53.49%), Postives = 108/172 (62.79%), Query Frame = -3
Query:  187 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGK--PLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAE--GRQNGTPKSKVVIADSGELP 690
            K +FD+ I GKP GRIV  L+   VPKTAENF  LC G  G+ K+    PL YKGS FHR+I  FM Q           GESIY EKF DENF +KH  P LLSMANAGP+TNGSQ FIT V T  LDG+HVVFG+V+ G  +V  +E +   ++N  P   V I D G LP
Sbjct:    5 KTFFDISIGGKPQGRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIENQQCDQENNKPLRDVKIDDCGVLP 176          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41
Identity = 90/169 (53.25%), Postives = 109/169 (64.50%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSG-KPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGT-PKSKVVIADSGEL 690
            + +FD+ I  +PAGR+V  LF    PKT ENFR LCTGEKG GKS  KPLHYK   FHR++  FM+Q           GESIYG  F DE+F +KH    LLSMAN G DTNGSQFFITT  T  LDG HVVFG+V+SG +VV ++E +     + P ++V I   GEL
Sbjct:    9 RCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGEL 177          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41
Identity = 90/169 (53.25%), Postives = 109/169 (64.50%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSG-KPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGT-PKSKVVIADSGEL 690
            + +FD+ I  +PAGR+V  LF    PKT ENFR LCTGEKG GKS  KPLHYK   FHR++  FM+Q           GESIYG  F DE+F +KH    LLSMAN G DTNGSQFFITT  T  LDG HVVFG+V+SG +VV ++E +     + P ++V I   GEL
Sbjct:    9 RCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGEL 177          
The following BLAST results are available for this feature:
BLAST of CF832445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPID_KLULA1.918e-4254.24Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
RBP2_BOVIN2.505e-4252.33E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos ta... [more]
PPID_CANGA2.505e-4254.07Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
PPIA_PARPR2.505e-4254.27Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]
CYPH_NEUCR2.121e-4153.19Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
RBP2_HUMAN3.618e-4151.74E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=R... [more]
CYP1_BRUMA3.618e-4152.87Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia ma... [more]
PPID_YEAST4.725e-4153.49Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
PPIG_RAT8.060e-4153.25Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIG_MOUSE8.060e-4153.25Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832445 ID=CF832445; Name=CF832445; organism=Citrus sinensis; type=EST; length=716bp
TTTTTTTTTATTTTNAGAAAAGGATCCCCTTAAAATGACCCCTTTACTTG
GCAAACAACCTAGGACATTTTAAAATGTCTCCTTTTTGATAAATAGGAAA
ATTAAGAGTATCTTCATGAAGGTTGAAAAGACGAAAGGATTAAAAAGGGG
TATACCCTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCACCGC
TGTCTGCAATGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCTTCA
GCTTCAACCTTGAAAACTACATCCATCCCCGATAGCACCTTTCCAAATAC
AACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGAATT
GTGAACCATTGGTGTCTGGCCCAGCATTTGCCATTGACAAAAGCCCTGGG
CCGGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATAAAT
TGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAAGCA
TAAAGCTGGGAATAATCCTATGAAACGTACTTCCCTTGTAGTGGAGTGGC
TTCCCACTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAAATT
TTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATACGTC
CGGCAGGTTTTCCGGCAATCTCAACGTCAAAGTAAACTTTGTTTGTGATT
TCTTTCAAATTCTGAT
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