CF832445

Overview
NameCF832445
Unique NameCF832445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 167.162 bits (422), Expect = 8.060e-41
Identity = 90/169 (53.25%), Postives = 109/169 (64.50%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSG-KPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGT-PKSKVVIADSGEL 690
            + +FD+ I  +PAGR+V  LF    PKT ENFR LCTGEKG GKS  KPLHYK   FHR++  FM+Q           GESIYG  F DE+F +KH    LLSMAN G DTNGSQFFITT  T  LDG HVVFG+V+SG +VV ++E +     + P ++V I   GEL
Sbjct:    9 RCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGEL 177          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.053e-40
Identity = 89/165 (53.94%), Postives = 107/165 (64.85%), Query Frame = -3
Query:  190 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 684
            YFD+ IA +PAGR+   LF   VPKTA NF+ LC G+K   ++G  L Y GS+FHR I  FMLQ           GESIYGEKF DENF+LKH  P LLSMANAGP TNGSQFFITTV T  LDG+HVVFG+V+    +V ++E     +  P   V I+ +G L
Sbjct:    7 YFDITIANEPAGRLTFELFDDVVPKTANNFKHLCIGDK-TNEAGVKLAYAGSSFHRCIKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRVIYNRSLVRRIENIPTTSDRPDQAVTISSAGVL 170          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.375e-40
Identity = 88/168 (52.38%), Postives = 110/168 (65.48%), Query Frame = -3
Query:  190 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEK-FPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEG-RQNGTPKSKVVIADSGEL 687
            V+ D+ I G+  GRI + LF   VPKTAENFR  CTGE  +G + KP+ YK STFHRII  FM+Q             +I+  + FPDENF LKH  PGLLSMANAG D+NG QFFITTV   +LDG+HVVFG+V+ G D+V ++E+     N  PKS V I + GE+
Sbjct:    7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGET-LGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGEM 173          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIA_SCHMA (Peptidyl-prolyl cis-trans isomerase OS=Schistosoma mansoni PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.375e-40
Identity = 90/166 (54.22%), Postives = 106/166 (63.86%), Query Frame = -3
Query:  193 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGE 690
            K +FD++   +  GRI+  LF   VP T  NFR LCT +   G       YKGS FHRIIP FM Q           G+SIYG KF DENF  KH    L SMANAGP+TNGSQFFITTV  SWLDG+HVVFGKV+SG+DVV K+E+ G  +G P  K++I D GE
Sbjct:    4 KAFFDIKAGDERLGRIIFELFND-VPDTTRNFRELCTHKNNFG-------YKGSVFHRIIPGFMCQGGDFTNGDGTGGKSIYGNKFKDENFNHKHEAFSL-SMANAGPNTNGSQFFITTVPCSWLDGKHVVFGKVVSGIDVVKKMESLGSTSGKPSKKIIIEDCGE 160          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.345e-40
Identity = 84/167 (50.30%), Postives = 106/167 (63.47%), Query Frame = -3
Query:  190 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGE-KFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 687
            V+FDV + G+P GR+ + LF    P+TAENFR  CTGE    + G+P  YKGS FHR+I  FM+Q             +IYG  KF DENF L+H  PGLLSMAN+GP+TNG QFFITT  T +L+G+HVVFG+V+ GMD+V  +E        P   VVI   GE+
Sbjct:   18 VFFDVALGGEPLGRLKLELFADVTPRTAENFRQFCTGESK-NQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIENTRTTRDKPNQDVVIIQCGEM 183          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.345e-40
Identity = 89/166 (53.61%), Postives = 103/166 (62.05%), Query Frame = -3
Query:  190 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFK-VEAEGRQNGTPKSKVVIADSGEL 684
            YFDV   GKP GRIV  L+   VP+T  NFR LC    G G       +K S FHR+IP FM+Q           GESIYG+KF DENF+ KH   G+LSMANAGP+TNGSQFFIT   T WLDG+HVVFGKV+ G D V K +E  G Q+G   S + I D G L
Sbjct:    5 YFDVSSNGKPLGRIVFELYDDVVPRTTNNFRQLCLNPPGKG-------FKHSIFHRVIPDFMIQGGDFTNGNGTGGESIYGKKFEDENFQKKHVERGMLSMANAGPNTNGSQFFITVTKTPWLDGKHVVFGKVIEGYDQVVKAMEKTGSQSGKTSSVLKIEDCGTL 163          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.063e-40
Identity = 82/153 (53.59%), Postives = 99/153 (64.71%), Query Frame = -3
Query:  253 NLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE 711
            N   +   V+FDV I G+  GR+ + LF   VPKTAENFR  CTGE    K G P+ YKGSTFHR+I  FM+Q             SIY   F DENFKL+H+ PGLLSMAN+GP TNG QFFIT     WLDG+HVVFGK++ G+ V+ K+E
Sbjct:    5 NSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIE 155          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_ASHGO (Peptidyl-prolyl cis-trans isomerase D OS=Ashbya gossypii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.164e-39
Identity = 90/170 (52.94%), Postives = 104/170 (61.18%), Query Frame = -3
Query:  187 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGI--GKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGELP 690
            K YFD+ I GKPAGR+V  ++    PKTAENF  LC G+ G    K G PL Y+GS FHR+I  FM Q           GESIYGEKF DENF  KH  P LLSMANAGP+TNGSQ FIT   T  LDG+HVVFG+V+ G  VV  +E +      P + V I   G LP
Sbjct:    6 KTYFDLSIGGKPAGRVVFEVYSDVTPKTAENFVRLCAGDAGECRTKPGVPLCYQGSLFHRVIKGFMCQFGDFTNGDGTGGESIYGEKFEDENFARKHDRPFLLSMANAGPNTNGSQCFITCAPTPHLDGKHVVFGEVIQGKRVVRAIERQETAADRPLADVRIDACGILP 175          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.520e-39
Identity = 90/172 (52.33%), Postives = 108/172 (62.79%), Query Frame = -3
Query:  190 VYFDVEIAGKPAGR-----IVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEA-EGRQNGTPKSKVVIADSGEL 687
            VY D+     PA R     IV+ L+   VP+TAENFR LCT    +  +G+PL ++ S FHR+IP FM+Q           GESIYGEKF DE+   KH  P LLSMANAG +TNGSQFFITTV T  LDG+HVVFG+VL G  VV +VE+ E   +  PK  V I D GEL
Sbjct:   15 VYLDLAFGSSPASRPGSNRIVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVLKGKGVVRRVESVETVASDRPKEDVKIVDCGEL 186          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.985e-39
Identity = 89/172 (51.74%), Postives = 109/172 (63.37%), Query Frame = -3
Query:  190 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGEL 702
            EIT+KVYFD+    K  GRIVMGL+G   P+T ENF  L      I +  K + Y  S FHR+IP+FM+Q           G+SI+G  F DENF +KH  PG LSMAN G +TNGSQFFITTV   WLDG+HVVFG+VL GMDVV  +E  +      P  +V+I +SGEL
Sbjct:   31 EITHKVYFDINHGDKQIGRIVMGLYGLTTPQTVENFYQLT-----ISRDPK-MGYLNSIFHRVIPNFMIQGGDFTHRSGIGGKSIFGNTFKDENFDVKHDKPGRLSMANRGKNTNGSQFFITTVPCPWLDGKHVVFGEVLDGMDVVHYIENVKTDSRNMPVKEVIIVESGEL 196          
The following BLAST results are available for this feature:
BLAST of CF832445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPIG_HUMAN8.060e-4153.25Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
PPID_CRYNE1.053e-4053.94Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
PPIH_SCHPO1.375e-4052.38Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
PPIA_SCHMA1.375e-4054.22Peptidyl-prolyl cis-trans isomerase OS=Schistosoma... [more]
PPIH_EMENI2.345e-4050.30Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
CYPH_UROFA2.345e-4053.61Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
PPIH_MOUSE3.063e-4053.59Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
PPID_ASHGO1.164e-3952.94Peptidyl-prolyl cis-trans isomerase D OS=Ashbya go... [more]
PPID_USTMA1.520e-3952.33Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]
CYPD_YEAST1.985e-3951.74Peptidyl-prolyl cis-trans isomerase D OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832445 ID=CF832445; Name=CF832445; organism=Citrus sinensis; type=EST; length=716bp
TTTTTTTTTATTTTNAGAAAAGGATCCCCTTAAAATGACCCCTTTACTTG
GCAAACAACCTAGGACATTTTAAAATGTCTCCTTTTTGATAAATAGGAAA
ATTAAGAGTATCTTCATGAAGGTTGAAAAGACGAAAGGATTAAAAAGGGG
TATACCCTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCACCGC
TGTCTGCAATGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCTTCA
GCTTCAACCTTGAAAACTACATCCATCCCCGATAGCACCTTTCCAAATAC
AACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGAATT
GTGAACCATTGGTGTCTGGCCCAGCATTTGCCATTGACAAAAGCCCTGGG
CCGGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATAAAT
TGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAAGCA
TAAAGCTGGGAATAATCCTATGAAACGTACTTCCCTTGTAGTGGAGTGGC
TTCCCACTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAAATT
TTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATACGTC
CGGCAGGTTTTCCGGCAATCTCAACGTCAAAGTAAACTTTGTTTGTGATT
TCTTTCAAATTCTGAT
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