CF832445

Overview
NameCF832445
Unique NameCF832445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYP11_CAEEL (Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorhabditis elegans GN=cyn-11 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.985e-39
Identity = 86/167 (51.50%), Postives = 101/167 (60.48%), Query Frame = -3
Query:  190 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGEL 687
            V+ +V   G P G IV+ LF    P+TAENFR  CTGE    K G P  YK  TFHR+I  FM+Q             SIYG KF DENF+LKH GPG+LSMANAG DTNG QFFIT   T +LD +HVVFG+VL GM  V K+E      N  PK  +V+   G+L
Sbjct:   19 VFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGE--YKKDGVPNGYKNCTFHRVIKDFMIQGGDFCNGDGTGLMSIYGSKFRDENFELKHIGPGMLSMANAGSDTNGCQFFITCAKTDFLDNKHVVFGRVLDGMLTVRKIENVPTGANNKPKLPIVVVQCGQL 183          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYPB_YEAST (Peptidyl-prolyl cis-trans isomerase B OS=Saccharomyces cerevisiae GN=CPR2 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.386e-39
Identity = 93/176 (52.84%), Postives = 112/176 (63.64%), Query Frame = -3
Query:  193 QNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTV-TTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQ-NGTPKSKVVIADSGE 714
            Q+ + IT KV+FD+E   +  GRIV+GL+GK  PKTA+NF  L T      K G    + GSTFHR+IP+FM+Q           G+SIYG+ FPDENF LKH   G LSMAN G DTNGSQFFITT    SWLDG+HVVFG+V+ GMDVV  ++   R  N  P   V IA  GE
Sbjct:   29 QDDEVITQKVFFDIEHGEEKVGRIVIGLYGKVCPKTAKNFYKLSTTTNS--KKG----FIGSTFHRVIPNFMVQGGDFTDGTGVGGKSIYGDTFPDENFTLKHDRKGRLSMANRGKDTNGSQFFITTTEEASWLDGKHVVFGQVVDGMDVVNYIQHVSRDANDKPLEAVKIAKCGE 198          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.423e-39
Identity = 89/163 (54.60%), Postives = 103/163 (63.19%), Query Frame = -3
Query:  196 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSG 684
            YF + I GK    I   LF   VPKT +NF +LC G +   K G+ L YKGS FHR+I +FMLQ           GESIYGEKF DENF+LKH  P LLSMANAGP+TNGSQFFITTV T  LDG+HVVFGKV+ G   V  +E    +N  P   VVI + G
Sbjct:    6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFE---KDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIH_ASPFU (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus fumigatus GN=cyp3 PE=3 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.287e-38
Identity = 83/167 (49.70%), Postives = 102/167 (61.08%), Query Frame = -3
Query:  190 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGE-KFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 687
            V+FD+ + G P GRI M LF    P+TAENFR  CTGE      GKP  YK S FHR+I  FM+Q             +IYG  KF DENF LKH   G+LSMAN+GP+TNG QFFITT  T +L+G+HVVFG+V+ GMD+V  +E        P   V+I   GE+
Sbjct:   16 VFFDIALGGVPLGRIKMELFADVTPRTAENFRRFCTGESK-NSQGKPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFADENFVLKHDRAGVLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVVDGMDIVRMIENTRTIRDKPSQDVIITQCGEM 181          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIH_ASPOR (Peptidyl-prolyl cis-trans isomerase H OS=Aspergillus oryzae GN=cyp3 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.341e-38
Identity = 82/167 (49.10%), Postives = 101/167 (60.48%), Query Frame = -3
Query:  190 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGE-KFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 687
            V+FD+ + G+  GRI M LF    P+TAENFR  CTGE      G+P  YK S FHR+I  FM+Q             +IYG  +F DENF LKH  PGLLSMAN+GP+TNG QFFITT  T +L+ +HVVFG+V+ GMDVV  +E        P   V I   GE+
Sbjct:   16 VFFDITLGGESLGRIKMELFTSITPRTAENFRQFCTGESK-SPQGRPQGYKNSKFHRVIKDFMIQGGDFVNGDGTGSRTIYGTPRFQDENFILKHDQPGLLSMANSGPNTNGCQFFITTTATPFLNNKHVVFGQVVEGMDVVRMIENTRTTRDKPNQDVTIIQCGEM 181          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYP8_CAEEL (Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhabditis elegans GN=cyn-8 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.169e-37
Identity = 84/168 (50.00%), Postives = 102/168 (60.71%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGEL 690
            + +FD+ I G+PAGRIV  L+    P+T ENFRA CTGE G   +G    Y+GS FHR+I  FM+Q           G SIYG  F DEN  LKH  P LLSMAN GPDTNGSQFFIT+     LDG+H VFG+V+ G++VV  +E  E      P  KV I   GE+
Sbjct:   10 RAFFDISINGEPAGRIVFSLWNHCCPRTVENFRAFCTGELG-KMNGHYASYQGSVFHRVIKGFMIQGGDITHGNGTGGYSIYGRTFDDENLALKHKKPYLLSMANRGPDTNGSQFFITSEEVPHLDGKHCVFGEVIKGVEVVKAIENLETGNEDKPVCKVEITHCGEM 176          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 154.836 bits (390), Expect = 4.139e-37
Identity = 86/167 (51.50%), Postives = 106/167 (63.47%), Query Frame = -3
Query:  190 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGEL 684
            +FD+EI  +P GRI+  LF    PKT +NF  LC+GEKG+GK+ GK L YKGSTFHR++ +FM+Q           GESIYG  F DENF LKH    LLSMAN G  TNGSQFFITT     LDG HVVFG V+SG +V+ ++E  +      P + V + D G L
Sbjct:   10 HFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVL 176          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: NKTR_HUMAN (NK-tumor recognition protein OS=Homo sapiens GN=NKTR PE=1 SV=2)

HSP 1 Score: 154.836 bits (390), Expect = 4.139e-37
Identity = 86/167 (51.50%), Postives = 106/167 (63.47%), Query Frame = -3
Query:  190 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGEL 684
            +FD+EI  +P GRI+  LF    PKT +NF  LC+GEKG+GK+ GK L YKGSTFHR++ +FM+Q           GESIYG  F DENF LKH    LLSMAN G  TNGSQFFITT     LDG HVVFG V+SG +V+ ++E  +      P + V + D G L
Sbjct:   10 HFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVL 176          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYPR_CALVI (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Calliphora vicina GN=NINAA PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.406e-37
Identity = 79/172 (45.93%), Postives = 104/172 (60.47%), Query Frame = -3
Query:  187 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGELP 699
            +T+K+Y DV+   KP GRIV GLFGK  PKT  NFR +C   +GI  +     Y GS FHR+I  F++Q             SIYG+ F DE   ++H  PG L MAN GPDTNG QF++TTV   WL+G+H VFGKV+ GMD V+ +E  +   +  P   V+I + GE+P
Sbjct:   24 VTSKIYMDVKHQKKPLGRIVFGLFGKRAPKTVTNFRHICL--RGINGTT----YVGSEFHRVISRFLIQGGDIVNNDGTGSTSIYGDFFQDEALDVEHLRPGYLGMANRGPDTNGCQFYVTTVAAQWLNGKHTVFGKVIEGMDTVYAIEDVKTDTDDHPIDPVIIVNCGEMP 189          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYPR_DROME (Peptidyl-prolyl cis-trans isomerase, rhodopsin-specific isozyme OS=Drosophila melanogaster GN=ninaA PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.222e-37
Identity = 80/174 (45.98%), Postives = 106/174 (60.92%), Query Frame = -3
Query:  187 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKL--KHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGELP 699
            +T+++Y DV+   KP GRI  GLFGK  PKT  NFR +C   +GI  +     Y GS FHR++  F++Q             SIYG+ FPDE+  L  +H  PG L MAN GPDTNG QF++TTV   WLDG+H VFGKVL GMD ++ +E  +   +  P   VVI++ GE+P
Sbjct:   25 VTSRIYMDVKHNKKPVGRITFGLFGKLAPKTVANFRHICL--RGINGTS----YVGSRFHRVVDRFLVQGGDIVNGDGTGSISIYGDYFPDEDKALAVEHNRPGYLGMANRGPDTNGCQFYVTTVGAKWLDGKHTVFGKVLEGMDTIYAIEDVKTDTDDFPVEPVVISNCGEIP 192          
The following BLAST results are available for this feature:
BLAST of CF832445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
CYP11_CAEEL1.985e-3951.50Peptidyl-prolyl cis-trans isomerase 11 OS=Caenorha... [more]
CYPB_YEAST3.386e-3952.84Peptidyl-prolyl cis-trans isomerase B OS=Saccharom... [more]
PPID_SCHPO4.423e-3954.6040 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
PPIH_ASPFU1.287e-3849.70Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
PPIH_ASPOR8.341e-3849.10Peptidyl-prolyl cis-trans isomerase H OS=Aspergill... [more]
CYP8_CAEEL3.169e-3750.00Peptidyl-prolyl cis-trans isomerase 8 OS=Caenorhab... [more]
NKTR_MOUSE4.139e-3751.50NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]
NKTR_HUMAN4.139e-3751.50NK-tumor recognition protein OS=Homo sapiens GN=NK... [more]
CYPR_CALVI5.406e-3745.93Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]
CYPR_DROME9.222e-3745.98Peptidyl-prolyl cis-trans isomerase, rhodopsin-spe... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832445 ID=CF832445; Name=CF832445; organism=Citrus sinensis; type=EST; length=716bp
TTTTTTTTTATTTTNAGAAAAGGATCCCCTTAAAATGACCCCTTTACTTG
GCAAACAACCTAGGACATTTTAAAATGTCTCCTTTTTGATAAATAGGAAA
ATTAAGAGTATCTTCATGAAGGTTGAAAAGACGAAAGGATTAAAAAGGGG
TATACCCTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCACCGC
TGTCTGCAATGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCTTCA
GCTTCAACCTTGAAAACTACATCCATCCCCGATAGCACCTTTCCAAATAC
AACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGAATT
GTGAACCATTGGTGTCTGGCCCAGCATTTGCCATTGACAAAAGCCCTGGG
CCGGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATAAAT
TGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAAGCA
TAAAGCTGGGAATAATCCTATGAAACGTACTTCCCTTGTAGTGGAGTGGC
TTCCCACTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAAATT
TTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATACGTC
CGGCAGGTTTTCCGGCAATCTCAACGTCAAAGTAAACTTTGTTTGTGATT
TCTTTCAAATTCTGAT
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