CF832445

Overview
NameCF832445
Unique NameCF832445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 152.14 bits (383), Expect = 2.683e-36
Identity = 83/177 (46.89%), Postives = 110/177 (62.15%), Query Frame = -3
Query:  190 LKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG---MDVVFKVEAEGRQNGTPKSKVVIADSGEL 708
            +  +  +V+ D+ +  KP GRI + LF    PKT ENFRALCTGE G+  + K  LHYKG+  HR++  FM+Q           G SIYG  F DE F LKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+ G   +DV+  +E +G+    P +KV I +SGEL
Sbjct:    1 MSSLEKRVFLDMALDEKPIGRIEIKLFTSEAPKTCENFRALCTGEVGMAPNNKARLHYKGNEIHRVVKKFMIQGGDITDGDGRGGFSIYGRYFDDEKFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVIKGREVVDVLDNLEVDGKSK--PIAKVRIFNSGEL 175          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.966e-35
Identity = 87/168 (51.79%), Postives = 101/168 (60.12%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS-GMDVVFKVEAEGRQNGTPKSKVVIADSGEL 690
            K + D+EI G+ AGRIV+ L G  VPKT +NF         IG   K   YKGSTFHR+I  FM+Q           G SIYG +F DENF LKH   G++SMANAGP+TNGSQFFITTV T WLDGRHVVFGK+ +     V  +EA G   G P     I D G L
Sbjct:   24 KAFMDIEIDGESAGRIVLELRGDVVPKTVKNF---------IGLFDK---YKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDENFTLKHDR-GVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALGSSGGRPSKIAKITDIGLL 178          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.127e-34
Identity = 81/169 (47.93%), Postives = 105/169 (62.13%), Query Frame = -3
Query:  190 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYG-EKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE--AEGRQNGTPKSKVVIADSGEL 687
            V+FD+ I   P GR+ M LF   VP+TAENFR LCTGE    ++G P  YK   FHR+I  FM+Q              IYG ++F DENF  KHTG GLLSMAN+GP++NG QFFIT     +LDG+HVVFG+++ G+  + K+E  A G  N  PK  V I + G++
Sbjct:   13 VFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATG-PNNRPKLPVKITECGQM 178          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 145.591 bits (366), Expect = 2.511e-34
Identity = 80/169 (47.34%), Postives = 105/169 (62.13%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGEL 690
            +V+ D+ +     GRI + LF +  PKT ENFRALCTGE G+  + K  LHYK + FHRI+  FM+Q           G SIYG  F DE FKLKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+ G +VV  ++         P +KV+I++ GEL
Sbjct:    6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVVDYIDNLAVDDKSKPLAKVLISNCGEL 174          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.126e-33
Identity = 80/157 (50.96%), Postives = 93/157 (59.24%), Query Frame = -3
Query:  190 PAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGEL 657
            PAGR+   LF   VP+T+ENFR LCTGE     +  P  YK S FHRII  FM Q             SIYG+KF DENF LKH   GLLSMAN+GP TNG QFFIT     +LDG+HVVFGKV+ G+  + K+E      N  PK  V I   GE+
Sbjct:    2 PAGRLKCELFSDIVPRTSENFRQLCTGE--FRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENVPTGANNRPKMAVRITQCGEM 156          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 8.932e-32
Identity = 69/168 (41.07%), Postives = 97/168 (57.74%), Query Frame = -3
Query:  190 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 693
            N V+ D+ I   P GR++  L+    PKT +NF+ LCTG+ G  +SG  LHY GS FHR++ +  +Q           GESIYG  F DENF + H   G+L M N G  +NGSQF+IT     +LD ++V FG+++ G DV+  +E+   +N  P    VI  SG+L
Sbjct:  138 NFVFLDISIDLYPIGRLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLIEGTDVLHHLESVPTENERPIQNCVITASGQL 305          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.561e-31
Identity = 69/165 (41.82%), Postives = 95/165 (57.58%), Query Frame = -3
Query:  193 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGE 687
            V+ D+ I   P GR++  L+    PKT +NF+ LCTG+ G  + G  LHYK S FHRI+ +  +Q           GESIYG  F DENF + H   G+L MAN G  +NGSQF+IT   T +LD + V FG+++ G +V+ ++E    QN  P     I DSG+
Sbjct:  144 VFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLELVPTQNERPIHMCRITDSGD 308          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.632e-25
Identity = 67/135 (49.63%), Postives = 82/135 (60.74%), Query Frame = -3
Query:  250 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEA 651
            G IV+ LF +  P T  NF  L  G   + K G+P  Y+G TFHR+I  FM+Q                G +FPDE +  L+H  PG+LSMANAGP TNGSQFFIT V T WLDG+H VFGKV+ GM+VV  + A
Sbjct:   49 GTIVLSLFFEKAPLTVCNFVGLAEGTLAVCK-GRPF-YQGLTFHRVIKDFMIQGGDPQGNGTGGP----GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKVVEGMEVVHAIIA 177          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.131e-25
Identity = 67/160 (41.88%), Postives = 90/160 (56.25%), Query Frame = -3
Query:  193 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFK---VEAEGRQNGTPKSKVV---IADSGE 651
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFF+T   T WLDG+H +FG+V SGM V+ +   V+  G      + K++   + + GE
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNGEDRPVDEVKIIRARVVEEGE 160          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.097e-25
Identity = 62/130 (47.69%), Postives = 78/130 (60.00%), Query Frame = -3
Query:  265 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVV 651
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFFIT   T WLDG+H +FG+V SGM ++
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRII 130          
The following BLAST results are available for this feature:
BLAST of CF832445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
CYP9_CAEBR2.683e-3646.89Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIA_NEOCA2.966e-3551.79Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]
PPIH_RHIOR1.127e-3447.93Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
CYP9_CAEEL2.511e-3447.34Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIH_USTMA2.126e-3350.96Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
PPIL6_BOVIN8.932e-3241.07Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
PPIL6_HUMAN7.561e-3141.82Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
PPIB_TREPA1.632e-2549.63Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
PPIL1_ASPOR2.131e-2541.88Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_EMENI8.097e-2547.69Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832445 ID=CF832445; Name=CF832445; organism=Citrus sinensis; type=EST; length=716bp
TTTTTTTTTATTTTNAGAAAAGGATCCCCTTAAAATGACCCCTTTACTTG
GCAAACAACCTAGGACATTTTAAAATGTCTCCTTTTTGATAAATAGGAAA
ATTAAGAGTATCTTCATGAAGGTTGAAAAGACGAAAGGATTAAAAAGGGG
TATACCCTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCACCGC
TGTCTGCAATGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCTTCA
GCTTCAACCTTGAAAACTACATCCATCCCCGATAGCACCTTTCCAAATAC
AACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGAATT
GTGAACCATTGGTGTCTGGCCCAGCATTTGCCATTGACAAAAGCCCTGGG
CCGGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATAAAT
TGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAAGCA
TAAAGCTGGGAATAATCCTATGAAACGTACTTCCCTTGTAGTGGAGTGGC
TTCCCACTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAAATT
TTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATACGTC
CGGCAGGTTTTCCGGCAATCTCAACGTCAAAGTAAACTTTGTTTGTGATT
TCTTTCAAATTCTGAT
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