CF832445

Overview
NameCF832445
Unique NameCF832445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL3_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryptococcus neoformans GN=CYP10 PE=3 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 8.671e-19
Identity = 58/134 (43.28%), Postives = 78/134 (58.21%), Query Frame = -3
Query:  253 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE 651
            G I + LF ++VP+TAENF ALC        SG+   Y G+ FHR I  FM+Q            +SI+G  F DE    L+    G+++MANAGPDTN SQFFIT      LDG++ +FGKV+ GM+ +  +E
Sbjct:   10 GDIKIELFCESVPRTAENFLALCA-------SGQ---YDGTLFHRNIRGFMIQGGDPTGTGKGG-QSIWGRPFSDEIRQTLRFNNRGMVAMANAGPDTNKSQFFITYAKQPSLDGKYSIFGKVIDGMETLDSME 132          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL3_CHICK (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gallus gallus GN=PPIL3 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.479e-18
Identity = 57/134 (42.54%), Postives = 76/134 (56.72%), Query Frame = -3
Query:  253 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE 651
            G I + LF +  PKT ENF ALC             +Y G  FHR I  FM+Q             SI+G+KF DE  + LKH+  G++SMAN GP+TNGSQFFIT      LD ++ VFGKV+ G++ + ++E
Sbjct:   10 GDIKIELFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPLGTGKGGT-SIWGKKFEDEFSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL2_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus musculus GN=Ppil2 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.479e-18
Identity = 58/151 (38.41%), Postives = 82/151 (54.30%), Query Frame = -3
Query:  208 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE--AEGRQNGTPKSKVVI 651
            G + + L     PKT ENF  LC          K  +Y G+ FHR I +F++Q            ES +G+ F DE    L HTG G+LSMAN+GP+TN SQFFIT  + ++LD +H +FG+V+ G D +  +E      +   PK +V+I
Sbjct:  289 GDLNLELHCDLTPKTCENFIKLC----------KKQYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESFWGKPFKDEFRPNLSHTGRGVLSMANSGPNTNKSQFFITFRSCAYLDKKHTIFGRVVGGFDTLTAMENVESDPKTDRPKEEVLI 428          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL3_RAT (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rattus norvegicus GN=Ppil3 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.523e-18
Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = -3
Query:  253 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE 651
            G I + +F +  PKT ENF ALC             +Y G  FHR I  FM+Q             SI+G+KF DE  + LKH   G++SMAN GP+TNGSQFFIT      LD ++ VFGKV+ G++ + ++E
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCVFHRNIKGFMVQTGDPTGTGRGG-SSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL3_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo sapiens GN=PPIL3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18
Identity = 56/134 (41.79%), Postives = 75/134 (55.97%), Query Frame = -3
Query:  253 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE 651
            G I + +F +  PKT ENF ALC             +Y G  FHR I  FM+Q             SI+G+KF DE  + LKH   G++SMAN GP+TNGSQFFIT      LD ++ VFGKV+ G++ + ++E
Sbjct:   10 GDIKIEVFCERTPKTCENFLALCASN----------YYNGCIFHRNIKGFMVQTGDPTGTGRGG-NSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELE 132          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL2_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryptococcus neoformans GN=CYP8 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.295e-18
Identity = 58/136 (42.65%), Postives = 74/136 (54.41%), Query Frame = -3
Query:  253 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFK---LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE 651
            G + + L G   PKT  NF  L        K+GK   Y    FHR+IP FM+Q            ES +GE F DE+ +    KH   G+LSMAN+GP TNGSQFF T   T  LDG+H VFGK++ G + + K+E
Sbjct:  323 GPLNVELHGDRAPKTVYNFVQLA-------KAGK---YDNVVFHRLIPGFMVQGGDPTGTGRGG-ESYWGEPFRDEHGEKGAYKHDSRGVLSMANSGPRTNGSQFFFTFRPTPHLDGKHTVFGKLVGGEETLDKIE 447          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL3_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibberella zeae GN=CYP10 PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18
Identity = 66/156 (42.31%), Postives = 83/156 (53.21%), Query Frame = -3
Query:  208 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXG----ESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL--SGMDVVFKVEA-EGRQNGTPKSKVVI 651
            G I + ++ ++VPKTAENF ALC    G G      +Y  S FHR+IP FM Q                 SI+G  F DE    L+H   G+LSMAN GP TNGSQFFIT      LDG + VFG+V+   G+  + K+EA E  +   PK  V I
Sbjct:   10 GDIKVEIYCESVPKTAENFLALC----GSG------YYDKSPFHRVIPKFMAQTGAPATPNPPENPKGGRSIWGGAFEDEIRPALRHGARGVLSMANKGPGTNGSQFFITFDKAPHLDGLNTVFGRVIGDEGLATLAKMEAVEVDRKNRPKEPVRI 155          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL2_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo sapiens GN=PPIL2 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.621e-18
Identity = 54/134 (40.30%), Postives = 76/134 (56.72%), Query Frame = -3
Query:  253 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE 651
            G + + L     PKT ENF  LC          K  +Y G+ FHR I +F++Q            ES +G+ F DE    L HTG G+LSMAN+GP++N SQFFIT  + ++LD +H +FG+V+ G DV+  +E
Sbjct:  289 GDLNLELHCDLTPKTCENFIRLC----------KKHYYDGTIFHRSIRNFVIQGGDPTGTGTGG-ESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAME 411          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL3_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neurospora crassa GN=cyp-10 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.341e-18
Identity = 59/141 (41.84%), Postives = 76/141 (53.90%), Query Frame = -3
Query:  244 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXG----ESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEG 651
            G + + +F ++VPKTAENF ALC        SG   +Y  S FHR+IPSFM+Q                 SIYG  F DE    L+H   G++SMAN GP+TNGSQFFI       LDG + VFGK++    +    + EG
Sbjct:   10 GDLKIEIFCESVPKTAENFLALCA-------SG---YYNASPFHRMIPSFMVQTGAPANPSPPENPKGGRSIYGPTFEDEIRPVLRHNERGIVSMANKGPNTNGSQFFILFDKAPHLDGLNTVFGKLIGDESLQTLAKLEG 140          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIL6_MOUSE (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus musculus GN=Ppil6 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 8.305e-18
Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = -3
Query:  382 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSM 687
            VY D+ I   P GR++  L+  A P+T  NF+ LCTG  G  + G  LHYK S FHR++ +  +Q           GESIYG  F DENF + H   G+L M
Sbjct:  146 VYLDICIDLSPIGRLIFELYCDACPRTCTNFQVLCTGTSGFSERGTKLHYKDSIFHRVVQNGWIQGGDIVQGRGDDGESIYGPTFEDENFSIPHNKRGVLGM 247          

HSP 2 Score: 23.483 bits (49), Expect = 8.305e-18
Identity = 11/24 (45.83%), Postives = 13/24 (54.17%), Query Frame = -1
Query:  294 TPMVHNSSLQL*QLAGWMAGMLYL 365
            TPM HNS+    QL  W+  M  L
Sbjct:  253 TPMGHNSTSHYRQLPTWIKNMWLL 276          
The following BLAST results are available for this feature:
BLAST of CF832445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPIL3_CRYNE8.671e-1943.28Peptidyl-prolyl cis-trans isomerase-like 3 OS=Cryp... [more]
PPIL3_CHICK1.479e-1842.54Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gall... [more]
PPIL2_MOUSE1.479e-1838.41Peptidyl-prolyl cis-trans isomerase-like 2 OS=Mus ... [more]
PPIL3_RAT2.523e-1841.79Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ratt... [more]
PPIL3_HUMAN3.295e-1841.79Peptidyl-prolyl cis-trans isomerase-like 3 OS=Homo... [more]
PPIL2_CRYNE3.295e-1842.65Peptidyl-prolyl cis-trans isomerase-like 2 OS=Cryp... [more]
PPIL3_GIBZE5.621e-1842.31Peptidyl-prolyl cis-trans isomerase-like 3 OS=Gibb... [more]
PPIL2_HUMAN5.621e-1840.30Peptidyl-prolyl cis-trans isomerase-like 2 OS=Homo... [more]
PPIL3_NEUCR7.341e-1841.84Peptidyl-prolyl cis-trans isomerase-like 3 OS=Neur... [more]
PPIL6_MOUSE8.305e-1842.16Peptidyl-prolyl cis-trans isomerase-like 6 OS=Mus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832445 ID=CF832445; Name=CF832445; organism=Citrus sinensis; type=EST; length=716bp
TTTTTTTTTATTTTNAGAAAAGGATCCCCTTAAAATGACCCCTTTACTTG
GCAAACAACCTAGGACATTTTAAAATGTCTCCTTTTTGATAAATAGGAAA
ATTAAGAGTATCTTCATGAAGGTTGAAAAGACGAAAGGATTAAAAAGGGG
TATACCCTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCACCGC
TGTCTGCAATGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCTTCA
GCTTCAACCTTGAAAACTACATCCATCCCCGATAGCACCTTTCCAAATAC
AACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGAATT
GTGAACCATTGGTGTCTGGCCCAGCATTTGCCATTGACAAAAGCCCTGGG
CCGGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATAAAT
TGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAAGCA
TAAAGCTGGGAATAATCCTATGAAACGTACTTCCCTTGTAGTGGAGTGGC
TTCCCACTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAAATT
TTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATACGTC
CGGCAGGTTTTCCGGCAATCTCAACGTCAAAGTAAACTTTGTTTGTGATT
TCTTTCAAATTCTGAT
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