CF832445

Overview
NameCF832445
Unique NameCF832445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2181 contig Csv1_Contig2181:161..876. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.991e-48
Identity = 97/166 (58.43%), Postives = 114/166 (68.67%), Query Frame = -3
Query:  190 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 687
            VYFDV   G+  G+I   L+   VPKTAENFRALCTGEKG G       YKGS FHR+IP FMLQ           G+SIYG KF DENF  +H  PGLLSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V  G+D+V K+E+ G  +G    K+VI +SG+L
Sbjct:    4 VYFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFG-------YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIESFGSGSGATSKKIVIEESGQL 162          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_YARLI (Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia lipolytica GN=CPR6 PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.212e-48
Identity = 100/172 (58.14%), Postives = 117/172 (68.02%), Query Frame = -3
Query:  178 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGELPL*F 690
            +V+F+V I GK  G+I   LF   VPKTAENFRALCTGEKG  ++G PLH+KGS+FHR+I  FM+Q           GESIYGEKFPDE F   H  P LLSMANAGP+TNGSQFFITT  T  LD +HVVFGK+LSG  +V ++E  E  +   PK  V I D GELP  F
Sbjct:    5 RVFFEVAIGGKTIGKIYFELFADKVPKTAENFRALCTGEKGNTQAGIPLHFKGSSFHRVIKDFMVQGGDFTAGNGTGGESIYGEKFPDEAFPYPHDQPFLLSMANAGPNTNGSQFFITTTETPHLDNKHVVFGKLLSGKGIVRQIERTETGEQDRPKQPVTIVDCGELPADF 176          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 5.212e-48
Identity = 101/171 (59.06%), Postives = 120/171 (70.18%), Query Frame = -3
Query:  190 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGEL 699
            I NKV+F ++    P GR+V  L+   VPKTAENFRALCTGEKGIGKSGKPLHYKGS+FHR+I +FM+Q           GESIYG  F DENF +KH   G LSMANAG +TNGSQFFITT  T  L+G H VFG+V+ G D+V KVE AE  ++  PK+  VI D G+L
Sbjct:    5 IRNKVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEGFDIVKKVENAETDRSDRPKAACVIEDCGQL 174          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_BOVIN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Bos taurus GN=PPID PE=1 SV=6)

HSP 1 Score: 191.045 bits (484), Expect = 5.212e-48
Identity = 102/168 (60.71%), Postives = 117/168 (69.64%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 690
            +V+FDV+I G+  GRIV+ LF   VPKTAENFRALCTGEKGIG + GKPLH+KG  FHRII  FM+Q           GESIYGEKF DENF  KH   GLLSMANAG +TNGSQFFITTV T  LDG+HVVFG+V+ GM V   +E    +   P    VIA+ GEL
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAECGEL 184          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_DEBHA (Peptidyl-prolyl cis-trans isomerase D OS=Debaryomyces hansenii GN=CPR6 PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.807e-48
Identity = 101/175 (57.71%), Postives = 120/175 (68.57%), Query Frame = -3
Query:  172 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGELPL*FPP 690
            KV+FD+   GKP GR+V  L+   VPKTAENFRALCTGEKG  +S GK LHYKGS FHRII  FM Q           GESIYGEKF DENF+L H  P LLSMANAG +TNGSQFFITTV T  L+G+HVVFG+V+ G  +V ++E  +  +N  P    +I+D GELP  + P
Sbjct:    9 KVFFDISADGKPKGRVVFELYNDVVPKTAENFRALCTGEKGASESSGKQLHYKGSIFHRIIKDFMCQGGDFTHGSGIGGESIYGEKFEDENFQLTHDKPFLLSMANAGANTNGSQFFITTVPTPHLNGKHVVFGEVIQGKSIVRQLERCDKGENDKPVEDWIISDCGELPSDYVP 183          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.891e-48
Identity = 100/168 (59.52%), Postives = 117/168 (69.64%), Query Frame = -3
Query:  190 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 693
            ++VY D++I    AGRI + L G  VPKTAENFRALCTGE G G       YK S+FHRIIP FM Q           G+SIYG KF DENF LKHTGPG LSMANAG +TNGSQFFI T  T+WLDG+HVVFG+V+SGM+VV ++E  G  +G P  +VVI D GEL
Sbjct:  155 SRVYLDIQIGNTLAGRIEIELRGDVVPKTAENFRALCTGEAGFG-------YKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCGSASGKPSKRVVIVDCGEL 315          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIA_ECHGR (Peptidyl-prolyl cis-trans isomerase OS=Echinococcus granulosus GN=CYP-1 PE=2 SV=2)

HSP 1 Score: 190.274 bits (482), Expect = 8.891e-48
Identity = 101/167 (60.48%), Postives = 114/167 (68.26%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 690
            K +FD+ I GKPAGRIV  LF   VPKT ENFRALCTGEKG G       YKGS FHRIIP FM Q           G+SIYG KF DENF  KH+ P +LSMANAG +TNGSQFFITT  TSWLDG+HVVFG+V SG DVV  +EA G  +G    +V+I D G+L
Sbjct:    4 KCFFDISIGGKPAGRIVFALFDD-VPKTVENFRALCTGEKGFG-------YKGSKFHRIIPGFMCQGGDFTAGNGTGGKSIYGSKFEDENFNHKHSKPMMLSMANAGKNTNGSQFFITTAVTSWLDGKHVVFGEVESGEDVVKDMEAVGSSSGKTSQEVLITDCGQL 162          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: CYP6_CAEEL (Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhabditis elegans GN=cyn-6 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 8.891e-48
Identity = 98/173 (56.65%), Postives = 122/173 (70.52%), Query Frame = -3
Query:  184 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNG-TPKSKVVIADSGELPL 699
            +T+KV+FD+EI G+P G+IV+GLFG+ VPKT +NF  L    +G G       Y GS FHR+I +FM+Q           G SIYGE+F DENFKL+H GPG LSMANAG DTNGSQFFITT  TSWLDG+HVVFGK+L GMDVV ++EA  +  G  P   VVIA++G +P+
Sbjct:   24 VTDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEG-------YVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIEDVVIANAGHIPV 189          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.161e-47
Identity = 98/180 (54.44%), Postives = 121/180 (67.22%), Query Frame = -3
Query:  175 NLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVE-AEGRQNGTPKSKVVIADSGELPL*FP 711
            N  ++T KV+FD+E+  +P GRI++GLFGK VPKT ENF+ L  G     K G+   YKGSTFHR+I SFM+Q           G SIYGE+FPDENFKLKH G G LSMANAGP+TNG+QFFITT    WLDG+HVVFGKV+ GM VV ++E  +      P   V IA+ G +P+  P
Sbjct:   26 NGPKVTEKVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKIANCGHIPVDVP 203          
BLAST of CF832445 vs. ExPASy Swiss-Prot
Match: PPID_HUMAN (40 kDa peptidyl-prolyl cis-trans isomerase OS=Homo sapiens GN=PPID PE=1 SV=3)

HSP 1 Score: 189.119 bits (479), Expect = 1.981e-47
Identity = 101/168 (60.12%), Postives = 117/168 (69.64%), Query Frame = -3
Query:  190 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVFKVEAEGRQNGTPKSKVVIADSGEL 690
            +V+FDV+I G+  GRIV+ LF   VPKTAENFRALCTGEKGIG + GKPLH+KG  FHRII  FM+Q           GESIYGEKF DENF  KH   GLLSMANAG +TNGSQFFITTV T  LDG+HVVFG+V+ G+ V   +E    +   P    VIA+ GEL
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGHTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGRNTNGSQFFITTVPTPHLDGKHVVFGQVIKGIGVARILENVEVKGEKPAKLCVIAECGEL 184          
The following BLAST results are available for this feature:
BLAST of CF832445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
PPIA_CANAL3.991e-4858.43Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
PPID_YARLI5.212e-4858.14Peptidyl-prolyl cis-trans isomerase D OS=Yarrowia ... [more]
PPID_DICDI5.212e-4859.06Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]
PPID_BOVIN5.212e-4860.7140 kDa peptidyl-prolyl cis-trans isomerase OS=Bos ... [more]
PPID_DEBHA6.807e-4857.71Peptidyl-prolyl cis-trans isomerase D OS=Debaryomy... [more]
PPIE_RHIOR8.891e-4859.52Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPIA_ECHGR8.891e-4860.48Peptidyl-prolyl cis-trans isomerase OS=Echinococcu... [more]
CYP6_CAEEL8.891e-4856.65Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhab... [more]
PPIB_SCHJA1.161e-4754.44Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPID_HUMAN1.981e-4760.1240 kDa peptidyl-prolyl cis-trans isomerase OS=Homo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01N24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832445 ID=CF832445; Name=CF832445; organism=Citrus sinensis; type=EST; length=716bp
TTTTTTTTTATTTTNAGAAAAGGATCCCCTTAAAATGACCCCTTTACTTG
GCAAACAACCTAGGACATTTTAAAATGTCTCCTTTTTGATAAATAGGAAA
ATTAAGAGTATCTTCATGAAGGTTGAAAAGACGAAAGGATTAAAAAGGGG
TATACCCTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCACCGC
TGTCTGCAATGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCTTCA
GCTTCAACCTTGAAAACTACATCCATCCCCGATAGCACCTTTCCAAATAC
AACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGAATT
GTGAACCATTGGTGTCTGGCCCAGCATTTGCCATTGACAAAAGCCCTGGG
CCGGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATAAAT
TGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAAGCA
TAAAGCTGGGAATAATCCTATGAAACGTACTTCCCTTGTAGTGGAGTGGC
TTCCCACTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAAATT
TTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATACGTC
CGGCAGGTTTTCCGGCAATCTCAACGTCAAAGTAAACTTTGTTTGTGATT
TCTTTCAAATTCTGAT
back to top