CF832458

Overview
NameCF832458
Unique NameCF832458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:545..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832458 vs. ExPASy Swiss-Prot
Match: CATA3_MAIZE (Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 8.536e-30
Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 3 
Query:    3 NFMHLDEEVDYFPSRYDPTRHAER-YPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVRSIWVSYWSQADRSLGQKLASRLNVRPSI 335
            NFMH DEEVDY+PSR+ P R A    P+P   + GRREKA I K N+FKQPGERYRSW  DRQ+RF+ R+  +L  P+V+ E+RSIW+   ++ D SLG K+A+RLN++ ++
Sbjct:  385 NFMHRDEEVDYYPSRHAPLRQAAPPTPLPPRPVAGRREKATIRKPNDFKQPGERYRSWDADRQDRFVRRFADSLGHPKVSQELRSIWIDLLAKCDASLGMKIATRLNMKANM 496
The following BLAST results are available for this feature:
BLAST of CF832458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
CATA3_MAIZE8.536e-3054.46Catalase isozyme 3 OS=Zea mays GN=CAT3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832458 ID=CF832458; Name=CF832458; organism=Citrus sinensis; type=EST; length=551bp
TGAATTTCATGCACTTGGATGAGGAGGTCGATTACTTTCCTTCGAGGTAT
GATCCTACTCGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTAC
AGGAAGGCGTGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGC
CTGGAGAGAGATACCGATCCTGGGCCCCAGACAGGCAAGAGAGGTTCCTT
AATCGATGGATTAAGGCTTTATGTGACCCACGTGTCACCCATGAGGTTCG
CAGCATATGGGTCTCTTACTGGTCTCAGGCCGACAGATCTCTGGGTCAGA
AGCTAGCTTCTCGTCTCAATGTGAGGCCAAGCATTTGAAGGTGTCACTTG
AACTGGAACACTGGATGCTTTTGACTTGCCAAGAGTGAGCAAGGAGTGAA
CACCAAGGGTGCAGCTATGTGAAGAATTTCGATCCTATGTTTGCTGTTGT
ATATTGTAATATAGAAAATAAACTTGCATGTTATGTGACTCTTTTCCTGT
TGTTTCAATTAATAAAAGTCTGTTTTATGAAGTTCAAAAAAAAAAAAAAA
A
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