CF832466
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832466 vs. ExPASy Swiss-Prot
Match: MYBB_HUMAN (Myb-related protein B OS=Homo sapiens GN=MYBL2 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.461e-22 Identity = 48/99 (48.48%), Postives = 64/99 (64.65%), Query Frame = 3 Query: 102 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 398 L KGPWT EEDQ +I ++ YG W + K R GK CR RW N+L P++K+ +T EE+ I H++LGNRW+ IA LPGRTDN +KN W++ Sbjct: 81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKG-RLGKQCRERWHNHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNS 178 HSP 2 Score: 68.1662 bits (165), Expect = 5.753e-11 Identity = 33/99 (33.33%), Postives = 53/99 (53.54%), Query Frame = 3 Query: 108 KGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNR-WSAIAARLPGRTDNEIKNVWHTH 401 K WT EED+ L ++ +G +W+ L R + C+ RW+ L PD+ +G +T+EE+ +I L + G + W+ IA L GR + + WH H Sbjct: 31 KVKWTHEEDEQLRALVRQFGQQDWKFLASHFPN-RTDQQCQYRWLRVLNPDLVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLKGRLGKQCRERWHNH 128
BLAST of CF832466 vs. ExPASy Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.366e-20 Identity = 46/97 (47.42%), Postives = 60/97 (61.86%), Query Frame = 3 Query: 108 KGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 398 KGPW+PEED+ L + YG NW + K R GKSCRLRW N L P ++ F+ EE++TI H GN+W+ IA L GRTDN +KN W++ Sbjct: 6 KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPG-RSGKSCRLRWCNQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNS 101
BLAST of CF832466 vs. ExPASy Swiss-Prot
Match: MYB_DROME (Myb protein OS=Drosophila melanogaster GN=Myb PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.156e-19 Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = 3 Query: 102 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 398 L KGPWT +ED ++I ++ +G W + + R GK CR RW N+L P+IK+ +T +E++ I H LGN+W+ IA RLPGRTDN IKN W++ Sbjct: 134 LIKGPWTRDEDDMVIKLVRNFGPKKWTLIARYLNG-RIGKQCRERWHNHLNPNIKKTAWTEKEDEIIYQAHLELGNQWAKIAKRLPGRTDNAIKNHWNS 231
BLAST of CF832466 vs. ExPASy Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.973e-19 Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 102 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 398 L KGPW+ EED +I+ ++ YG W + + R GK CR RW N+L P I + +T+EEE T+I H++ GN+W+ + LPGR+DN IKN W++ Sbjct: 85 LVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPG-RIGKQCRERWHNHLNPGINKNAWTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNS 182 HSP 2 Score: 77.0258 bits (188), Expect = 1.238e-13 Identity = 36/99 (36.36%), Postives = 57/99 (57.58%), Query Frame = 3 Query: 108 KGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLG-NRWSAIAARLPGRTDNEIKNVWHTH 401 KG WTPEED++L ++ + NW+ + + R C RW L P++ +G +++EE++TII+L E G +WS I+ LPGR + + WH H Sbjct: 35 KGQWTPEEDEVLCKAVERFQGKNWKKIA-ECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNH 132
BLAST of CF832466 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.346e-18 Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 3 Query: 99 GLKKGPWTPEEDQILINYIQLYGHGNWRALP-KQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 398 G+ KGPW EED L+ + G W ++ K G R GK CR RW N+L P++++ N+T EE+ II+ H LGN+W+AI+ L GR N IKN W++ Sbjct: 274 GIVKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIPG--RIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNS 372
BLAST of CF832466 vs. ExPASy Swiss-Prot
Match: MYBAA_DICDI (Myb-like protein AA OS=Dictyostelium discoideum GN=mybAA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.016e-17 Identity = 47/122 (38.52%), Postives = 67/122 (54.92%), Query Frame = 3 Query: 75 RAPCCEKMGLKK--------------GPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 398 ++P +K GLKK G WT EED+ L + + L+G W+ + LR G+ CR RW N L P IKR +T EE+ I++ H GN+W+ I+ LPGRT+ IKN W++ Sbjct: 732 KSPAVKKSGLKKSGRSKSSSNESKAKGHWTKEEDEKLRSLVDLHGTKRWKYIASLL-CLRNGRQCRERWSNQLDPSIKRDAWTLEEDRIILDAHSKYGNKWAEISKLLPGRTNCAIKNHWNS 852
BLAST of CF832466 vs. ExPASy Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=4 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 9.163e-17 Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 3 Query: 102 LKKGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVWHT 398 L KG WT +ED +I ++ YG W + R GK CR RW N+L P+IK+ ++ EE+ I + H + GN+W+ IA LPGRTDN IKN W++ Sbjct: 199 LVKGAWTKDEDDKVIELVKTYGPKKWSDIALHLKG-RMGKQCRERWHNHLNPNIKKEAWSDEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNS 296 HSP 2 Score: 72.0182 bits (175), Expect = 3.984e-12 Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 3 Query: 108 KGPWTPEEDQILINYIQLYGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLG-NRWSAIAARLPGRTDNEIKNVWHTH 401 KG WT EEDQILI + L+ NW+ + + R C R+ L P++ +G +T++E+D +I L + G +WS IA L GR + + WH H Sbjct: 149 KGKWTSEEDQILIKAVNLHNQKNWKKIAEHFP-DRTDVQCHHRYQKVLHPNLVKGAWTKDEDDKVIELVKTYGPKKWSDIALHLKGRMGKQCRERWHNH 246
BLAST of CF832466 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.666e-16 Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 117 WTPEEDQILINYIQLYGHGNWRALPKQAG--LLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVW 392 W PEED IL+ Y++ YG W + ++ L R KSC RW NYLRP IK+G+ T +E+ +I L GN+W IAA +PGRT + W Sbjct: 12 WRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWW 105
BLAST of CF832466 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.666e-16 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 3 Query: 117 WTPEEDQILINYIQLYGHGNWRALPKQ--AGLLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVW 392 W PEED +L Y++ YG W + ++ L R KSC RW NYLRP IK+G+ T EE+ +I L GN+W IAA +PGRT + W Sbjct: 7 WRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWW 100
BLAST of CF832466 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.948e-15 Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 3 Query: 117 WTPEEDQILINYIQLYGHGNWRALPKQAG--LLRCGKSCRLRWINYLRPDIKRGNFTREEEDTIINLHEMLGNRWSAIAARLPGRTDNEIKNVW 392 W+ EED +L Y++ +G W + ++ L R KSC RW NYL+P IK+G+ T EE+ +I L E GN+W IAA +PGRT + W Sbjct: 7 WSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWW 100 The following BLAST results are available for this feature:
BLAST of CF832466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832466 ID=CF832466; Name=CF832466; organism=Citrus sinensis; type=EST; length=765bpback to top |