CF832467

Overview
NameCF832467
Unique NameCF832467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12113 contig Csv1_Contig12113:188..986. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PATB1_SOLTU (Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 7.501e-33
Identity = 86/215 (40.00%), Postives = 126/215 (58.60%), Query Frame = -2 
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C S  AAP Y PPH+  T  S+ G T  F+LVDGGVA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +   S + D+++S +FQ+  S++NYLR+Q++ L+G     D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS + KLR
Sbjct:  184 CYSIAAAPIYFPPHHFVTHTSN-GATYEFNLVDGGVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQLTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSNRKKLR 380
[Close]
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PAT0_SOLTU (Patatin OS=Solanum tuberosum PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.796e-33
Identity = 86/215 (40.00%), Postives = 126/215 (58.60%), Query Frame = -2 
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAP Y PPH+  T  S+ G T  F+LVDG VA   +P LL++S ++  + + +P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +   S + D+++S +FQ+  S++NYLR+Q++ L+G     D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR
Sbjct:  184 CYSTAAAPIYFPPHHFVTHTSN-GATYEFNLVDGAVATVGDPALLSLS-VATRLAQDDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALTGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380
[Close]
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PATB2_SOLTU (Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.850e-32
Identity = 85/215 (39.53%), Postives = 126/215 (58.60%), Query Frame = -2 
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAP Y PPH+  T  S+ G    F+LVDG VA   +P LL++S ++  + +++P F     +D + ML+LSLGTGT  + +  Y A +A+KWG   W+       I  + +   S + D+++S +FQ+  S++NYLR+Q++ L+G     D A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR
Sbjct:  184 CYSTAAAPIYFPPHHFVTHTSN-GARYEFNLVDGAVATVGDPALLSLS-VATRLAQEDPAFSSIKSLDYKQMLLLSLGTGTNSEFDKTYTAEEAAKWGPLRWMLA-----IQQMTNAASSYMTDYYISTVFQARHSQNNYLRVQENALNGTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 380
[Close]
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PAT13_SOLTU (Patatin-13 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.850e-32
Identity = 84/215 (39.07%), Postives = 125/215 (58.14%), Query Frame = -2 
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAPTY PPHY  T  S+ G    F+LVDG VA   +P LL++S ++    +++P F     ++ + +L+LSLGTGT  + +  + A + +KWG  +W+       I  +     S + D+++S +FQ   S++NYLR+Q++ L+G    AD A+E NM+ LV+ G  LLK+ VS+           D   T EEAL  FAKLLS++ KLR
Sbjct:  185 CYSTAAAPTYFPPHYFATNTSN-GDKYEFNLVDGAVATVADPALLSVS-VATRRAEEDPAFASIRSLNYKQLLLLSLGTGTNSEFDKTHTAQETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLSDRKKLR 381
[Close]
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PT1K2_SOLTU (Patatin-1-Kuras 2 OS=Solanum tuberosum GN=pat1-k2 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.723e-32
Identity = 84/215 (39.07%), Postives = 126/215 (58.60%), Query Frame = -2 
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAPTY PPHY  T ++ +G    F+LVDG VA   +P LL++S ++    +++P F     ++ + ML+LSLGTGT  + +  + A + +KWG  +W+       I  +     S + D+++S +FQ   S++NYLR+Q++ L+G    AD A+E NM+ L + G  LLK+ VS+ N E           T EEAL  FAKLLS++ KLR
Sbjct:  173 CYSTAAAPTYFPPHYFAT-NTINGDKYKFNLVDGAVATVADPALLSVS-VATRRAQEDPAFASIRSLNYKKMLLLSLGTGTTSEFDKTHTAEETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKLR 369
[Close]
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PATA3_SOLTU (Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.723e-32
Identity = 84/215 (39.07%), Postives = 126/215 (58.60%), Query Frame = -2 
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAPTY PPHY  T ++ +G    F+LVDG VA   +P LL++S ++    +++P F     ++ + ML+LSLGTGT  + +  + A + +KWG  +W+       I  +     S + D+++S +FQ   S++NYLR+Q++ L+G    AD A+E NM+ L + G  LLK+ VS+ N E           T EEAL  FAKLLS++ KLR
Sbjct:  185 CYSTAAAPTYFPPHYFAT-NTINGDKYEFNLVDGAVATVADPALLSVS-VATRRAQEDPAFASIRSLNYKKMLLLSLGTGTTSEFDKTHTAEETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKLR 381
[Close]
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PAT07_SOLTU (Patatin-07 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.723e-32
Identity = 84/215 (39.07%), Postives = 125/215 (58.14%), Query Frame = -2 
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAPTY PPHY  T  S+ G    F+LVDG VA   +P LL++S ++    +++P F     ++ + +L+LSLGTGT  + +  + A + +KWG  +W+       I  +     S + D+++S +FQ   S++NYLR+Q++ L+G    AD A+E NM+ LV+ G  LLK+ VS+ N E           T EEAL  FAKLLS++ K R
Sbjct:  184 CYSTAAAPTYFPPHYFATNTSN-GDKYEFNLVDGAVATVADPALLSVS-VATRRAEEDPAFASIRSLNYKQLLLLSLGTGTNSEFDKTHTAQETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKFR 380
[Close]
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PAT05_SOLTU (Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.723e-32
Identity = 84/215 (39.07%), Postives = 125/215 (58.14%), Query Frame = -2 
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAPTY PPHY  T  S+ G    F+LVDG VA   +P LL++S ++    +++P F     ++ + +L+LSLGTGT  + +  + A + +KWG  +W+       I  +     S + D+++S +FQ   S++NYLR+Q++ L+G    AD A+E NM+ LV+ G  LLK+ VS+ N E           T EEAL  FAKLLS++ K R
Sbjct:  185 CYSTAAAPTYFPPHYFATNTSN-GDKYEFNLVDGAVATVADPALLSVS-VATRRAEEDPAFASIRSLNYKQLLLLSLGTGTNSEFDKTHTAQETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKFR 381
[Close]
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PAT03_SOLTU (Patatin-03 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.723e-32
Identity = 84/215 (39.07%), Postives = 125/215 (58.14%), Query Frame = -2 
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAPTY PPHY  T  S+ G    F+LVDG VA   +P LL++S ++    +++P F     ++ + +L+LSLGTGT  + +  + A + +KWG  +W+       I  +     S + D+++S +FQ   S++NYLR+Q++ L+G    AD A+E NM+ LV+ G  LLK+ VS+ N E           T EEAL  FAKLLS++ K R
Sbjct:  185 CYSTAAAPTYFPPHYFATNTSN-GDKYEFNLVDGAVATVADPALLSVS-VATRRAEEDPAFASIRSLNYKQLLLLSLGTGTNSEFDKTHTAQETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLVQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKFR 381
[Close]
BLAST of CF832467 vs. ExPASy Swiss-Prot
Match: PAT02_SOLTU (Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.723e-32
Identity = 84/215 (39.07%), Postives = 126/215 (58.60%), Query Frame = -2 
Query:  162 CISTFAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVAA-NNPTLLAISHISKEMVKQNPQFRDKNPMDGRDMLVLSLGTGTAKK-ELKYNAAKASKWGIFEWIYEDGNTPILDIYSDGGSDIVDFHMSALFQSCGSKDNYLRIQDDTLSGDAASADIATEENMQRLVETGTKLLKEQVSRVNLETGRYEKVDGEVTNEEALAHFAKLLSEQLKLR 800
            C ST AAPTY PPHY  T ++ +G    F+LVDG VA   +P LL++S ++    +++P F     ++ + ML+LSLGTGT  + +  + A + +KWG  +W+       I  +     S + D+++S +FQ   S++NYLR+Q++ L+G    AD A+E NM+ L + G  LLK+ VS+ N E           T EEAL  FAKLLS++ KLR
Sbjct:  185 CYSTAAAPTYFPPHYFAT-NTINGDKYEFNLVDGAVATVADPALLSVS-VATRRAQEDPAFASIRSLNYKKMLLLSLGTGTTSEFDKTHTAEETAKWGALQWMLV-----IQQMTEAASSYMTDYYLSTVFQDLHSQNNYLRVQENALTGTTTKADDASEANMELLAQVGENLLKKPVSKDNPE-----------TYEEALKRFAKLLSDRKKLR 381
The following BLAST results are available for this feature:
BLAST of CF832467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PATB1_SOLTU7.501e-3340.00Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2[more]
PAT0_SOLTU9.796e-3340.00Patatin OS=Solanum tuberosum PE=3 SV=1[more]
PATB2_SOLTU2.850e-3239.53Patatin-B2 OS=Solanum tuberosum GN=PATB2 PE=1 SV=1[more]
PAT13_SOLTU2.850e-3239.07Patatin-13 OS=Solanum tuberosum PE=2 SV=1[more]
PT1K2_SOLTU3.723e-3239.07Patatin-1-Kuras 2 OS=Solanum tuberosum GN=pat1-k2 ... [more]
PATA3_SOLTU3.723e-3239.07Patatin group A-3 OS=Solanum tuberosum PE=2 SV=1[more]
PAT07_SOLTU3.723e-3239.07Patatin-07 OS=Solanum tuberosum PE=2 SV=1[more]
PAT05_SOLTU3.723e-3239.07Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV... [more]
PAT03_SOLTU3.723e-3239.07Patatin-03 OS=Solanum tuberosum PE=2 SV=1[more]
PAT02_SOLTU3.723e-3239.07Patatin-02 OS=Solanum tuberosum GN=StPat14K07.03 P... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O12_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832467 ID=CF832467; Name=CF832467; organism=Citrus sinensis; type=EST; length=801bp
TTTTTTTTTTTTTTTATTTAATAGTAATAATCTTATTAATTCCCCCTTTC
CAATTGGAAGCACTTTTGAGTCGGATTGATTACACCTAAAAACACGCATG
CGGAATCCTTATGCCTTACTCAAATAAAACGAGTTTCAAATTAAAAGACT
TATTGGCGGCGGCGGAGCTTAAGTTGTTCAGAGAGTAATTTGGCAAAGTG
AGCAAGTGCTTCTTCATTTGTGACCTCTCCGTCAACCTTCTCATATCTGC
CAGTCTCCAGGTTCACCCTCGACACCTGCTCCTTCAACAACTTGGTTCCA
GTTTCCACAAGCCTTTGCATATTCTCCTCCGTGGCAATGTCAGCAGATGC
TGCATCACCACTCAACGTGTCGTCCTGAATTCGAAGGTAGTTGTCCTTGC
TTCCGCAGGATTGAAAGAGAGCAGACATATGGAAATCAACAATATCGGAG
CCTCCATCAGAGTAGATGTCGAGTATTGGGGTATTGCCATCTTCATAGAT
CCATTCGAAAATGCCCCACTTGGAGGCTTTGGCTGCATTGTACTTCAATT
CTTTCTTGGCTGTACCTGTGCCTAGTGATAGTACCAGCATATCTCTACCG
TCCATTGGGTTTTTGTCCCTGAACTGGGGGTTCTGCTTCACCATTTCCTT
CGATATGTGGCTTATTGCCAATAGGGTAGGGTTATTGGCAGCAACTCCGC
CATCAACAAGATCAAAAGTGCGGGTTCCGCCACTGTCACTGTCCTTAGTC
TCCAAGTAATGAGGTGGGAGGTAAGTGGGCGCTGCAAAAGTGCTGATGCA
T
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