CF832468

Overview
NameCF832468
Unique NameCF832468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10374 contig Csv1_Contig10374:19..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PT2K2_SOLTU (Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.492e-44
Identity = 104/217 (47.93%), Postives = 131/217 (60.37%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            G+ +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI         GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP Y PPHY  T  SD G    F+LVDG VA   +P LL
Sbjct:   26 GEMVTVLSIDGGGIKGIIPAVILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIIPFYFEHGPHIF------NYSGSI--------FGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPMYFPPHYFITHTSD-GDIYEFNLVDGAVATVGDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PAT05_SOLTU (Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.492e-44
Identity = 100/217 (46.08%), Postives = 133/217 (61.29%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            G+ +TVLS              L FLE +LQ++D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY +HGP IF             +S   +  GPKYDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A+++DIC ST+AAPTY PPHY  T  S +G    F+LVDG VA   +P LL
Sbjct:   26 GEMVTVLSIDGGGIKGIIPGIILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIF-------------NSSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICYSTAAAPTYFPPHYFATNTS-NGDKYEFNLVDGAVATVADPALL 228          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PAT03_SOLTU (Patatin-03 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.479e-44
Identity = 100/217 (46.08%), Postives = 132/217 (60.83%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            G+ +TVLS              L FLE +LQ++D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY +HGP IF             +S   +  GPKYDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++   +   +A+++DIC ST+AAPTY PPHY  T  S +G    F+LVDG VA   +P LL
Sbjct:   26 GEMVTVLSIDGGGIKGIIPGIILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIF-------------NSSTGQFFGPKYDGKYLMQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLARSPELDAKMSDICYSTAAAPTYFPPHYFATNTS-NGDKYEFNLVDGAVATVADPALL 228          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PATM1_SOLTU (Patatin group M-1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.107e-43
Identity = 107/228 (46.93%), Postives = 136/228 (59.65%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI        +GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP Y PPHY  T  S +G    F+LVDGGVA   +P LL
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PAT14_SOLTU (Patatin-14 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.107e-43
Identity = 107/228 (46.93%), Postives = 136/228 (59.65%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI        +GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP Y PPHY  T  S +G    F+LVDGGVA   +P LL
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PAT10_SOLTU (Patatin-10 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.107e-43
Identity = 107/228 (46.93%), Postives = 136/228 (59.65%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI        +GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP Y PPHY  T  S +G    F+LVDGGVA   +P LL
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------IGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFITHTS-NGDIYEFNLVDGGVATVGDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PAT13_SOLTU (Patatin-13 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.446e-43
Identity = 100/217 (46.08%), Postives = 132/217 (60.83%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDGPS-ARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            G+ +TVLS              L FLE +LQ++D  + AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY +HGP IF             +S   +  GPKYDGKYL  +  E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A+++DIC ST+AAPTY PPHY  T  S +G    F+LVDG VA   +P LL
Sbjct:   26 GEMVTVLSVDGGGIKGIIPGIILEFLEGQLQKMDNNADARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFQHGPHIF-------------NSSTGQFFGPKYDGKYLMQVPQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMSDICYSTAAAPTYFPPHYFATNTS-NGDKYEFNLVDGAVATVADPALL 228          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PATB1_SOLTU (Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.889e-43
Identity = 106/228 (46.49%), Postives = 136/228 (59.65%), Query Frame = 1
Query:   79 MATAGSAEGK---KITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            +AT  S   K    +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N+S SI         GP+YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC S +AAP Y PPH+  T  S +G T  F+LVDGGVA   +P LL
Sbjct:   15 LATTSSTCAKLEEMVTVLSIDGGGIKGIIPAIILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NYSGSI--------FGPRYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSIAAAPIYFPPHHFVTHTS-NGATYEFNLVDGGVATVGDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PT2K3_SOLTU (Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.208e-43
Identity = 103/217 (47.47%), Postives = 130/217 (59.91%), Query Frame = 1
Query:  103 GKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            G+ +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N S SI         GP YDGKY   ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAPTY PPHY  T  S +G    F+LVDG VA   +P LL
Sbjct:   26 GEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NSSGSI--------FGPMYDGKYFLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPTYFPPHYFVTHTS-NGDKYEFNLVDGAVATVGDPALL 227          
BLAST of CF832468 vs. ExPASy Swiss-Prot
Match: PT2K1_SOLTU (Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 5.496e-43
Identity = 106/228 (46.49%), Postives = 135/228 (59.21%), Query Frame = 1
Query:   79 MATAGSA---EGKKITVLSXXXXXXXXXXXXXXLAFLESKLQELDG-PSARIADYFDVVAGTSTGGLVTTMLTAPNKEGGPFIAAKDINNFYLEHGPKIFPQISRSNFSESIASSIDKRLLGPKYDGKYLRALVNELLGDVTVKETLTNVVIPTFDIKLLQPVIFSTTDGKENVLKNARLADICISTSAAPTYLPPHYLETKDSDSGGTRTFDLVDGGVA-ANNPTLL 747
            +AT GS     G+ +TVLS              L FLE +LQE+D    AR+ADYFDV+ GTSTGGL+T M+T PN+   PF AAKDI  FY EHGP IF      N S +I         GP YDGKYL  ++ E LG+  V + LT V I +FDIK  +PVIF+ ++  ++   +A++ DIC ST+AAP Y PPHY  T  S +G    F+LVDG VA   +P LL
Sbjct:    3 LATTGSTCATLGEMVTVLSIDGGGIKGIIPATILEFLEGQLQEVDNNKDARLADYFDVIGGTSTGGLLTAMITTPNENNRPFAAAKDIVPFYFEHGPHIF------NSSGTI--------FGPMYDGKYLLQVLQEKLGETRVHQALTEVAISSFDIKTNKPVIFTKSNLAKSPELDAKMYDICYSTAAAPIYFPPHYFVTHTS-NGDRYEFNLVDGAVATVGDPALL 215          
The following BLAST results are available for this feature:
BLAST of CF832468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
PT2K2_SOLTU6.492e-4447.93Patatin-2-Kuras 2 OS=Solanum tuberosum GN=pat2-k2 ... [more]
PAT05_SOLTU6.492e-4446.08Patatin-05 OS=Solanum tuberosum GN=pat1-k1 PE=1 SV... [more]
PAT03_SOLTU8.479e-4446.08Patatin-03 OS=Solanum tuberosum PE=2 SV=1[more]
PATM1_SOLTU1.107e-4346.93Patatin group M-1 OS=Solanum tuberosum PE=2 SV=1[more]
PAT14_SOLTU1.107e-4346.93Patatin-14 OS=Solanum tuberosum PE=2 SV=1[more]
PAT10_SOLTU1.107e-4346.93Patatin-10 OS=Solanum tuberosum PE=2 SV=1[more]
PAT13_SOLTU1.446e-4346.08Patatin-13 OS=Solanum tuberosum PE=2 SV=1[more]
PATB1_SOLTU1.889e-4346.49Patatin-B1 OS=Solanum tuberosum GN=PATB1 PE=2 SV=2[more]
PT2K3_SOLTU4.208e-4347.47Patatin-2-Kuras 3 OS=Solanum tuberosum GN=pat2-k3 ... [more]
PT2K1_SOLTU5.496e-4346.49Patatin-2-Kuras 1 OS=Solanum tuberosum GN=pat2-k1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832468 ID=CF832468; Name=CF832468; organism=Citrus sinensis; type=EST; length=749bp
TAATTTCGAATCCTAATAGCTGCTCAATCTGATCGTACTTCTTTTTAACT
TCAAGAAGCTCTTTCAATTTGAAATAAAATGGCCACTGCCGGTTCTGCAG
AAGGAAAGAAAATAACAGTTCTGAGCATCGATGGAGGTGGCATTCGAGGC
ATTATTCCTGGCACTATTTTAGCTTTTCTTGAATCCAAGCTCCAGGAATT
GGATGGACCAAGTGCAAGAATTGCAGATTATTTTGATGTAGTAGCAGGAA
CAAGCACCGGCGGATTGGTAACCACCATGCTTACGGCACCCAACAAGGAA
GGCGGACCTTTCATTGCTGCAAAGGATATCAATAATTTTTATCTCGAGCA
CGGTCCTAAAATTTTCCCTCAAATTAGCCGCAGCAACTTCTCGGAATCGA
TTGCAAGCTCTATCGATAAACGGCTGCTTGGACCAAAGTATGATGGGAAG
TACCTGCGGGCACTAGTGAACGAGCTACTAGGAGACGTTACTGTGAAAGA
GACTCTTACCAACGTGGTTATACCAACTTTTGACATAAAGCTTCTTCAGC
CAGTCATCTTCTCAACCACCGATGGAAAAGAGAACGTTTTGAAGAATGCT
CGGCTGGCTGATATATGCATCAGCACTTCTGCAGCGCCCACTTACCTCCC
ACCTCACTACTTGGAGACTAAGGACAGTGACAGTGGCGGAACCCGCACTT
TTGATCTTGTTGATGGCGGAGTTGCTGCCAATAACCCTACCCTATTGGC
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