CF832473

Overview
NameCF832473
Unique NameCF832473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_NEUCR (S-adenosylmethionine synthetase OS=Neurospora crassa GN=eth-1 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.590e-57
Identity = 112/211 (53.08%), Postives = 150/211 (71.09%), Query Frame = -1
Query:  158 NDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 790
            +DNGA+VP+RV TV++S QH   +T +E+  ++ E +IK  IP KYLDEKT++H+ PSG FVIGGP GDAGLTGRKII+DTY            GKD +KVDRS AY+ R  AKS+VA GLARR +VQ+SYAIGV EPLS++VD+YGT     +E+++I++ +FD RPG++   LDL +     +L+TA  GHFG +   F+WE  K LK+
Sbjct:  189 HDNGAVVPLRVDTVVVSAQHAPEITTEELRKEILEKIIKTTIPAKYLDEKTVYHIQPSGLFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDFSKVDRSAAYVGRWIAKSLVAAGLARRALVQLSYAIGVAEPLSIYVDTYGTSDKTSEELVQIIRNNFDLRPGVIVKELDLAK---PIYLQTAKNGHFGTNQ-SFSWEKPKALKF 395          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.301e-57
Identity = 111/197 (56.35%), Postives = 142/197 (72.08%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            PVR+  ++ISTQH   V+ ++I ADL EHVIK VIP + LDE T +++NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK++VA G+A +  VQV+YAIGV +P+S+ VD++GTGKI D+EI+ I+ + FD RPG +  +LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  186 PVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTDLDLPWE 379          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_CLOP1 (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 7.301e-57
Identity = 111/197 (56.35%), Postives = 142/197 (72.08%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            PVR+  ++ISTQH   V+ ++I ADL EHVIK VIP + LDE T +++NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK++VA G+A +  VQV+YAIGV +P+S+ VD++GTGKI D+EI+ I+ + FD RPG +  +LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  186 PVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTDLDLPWE 379          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 9.535e-57
Identity = 119/208 (57.21%), Postives = 144/208 (69.23%), Query Frame = -1
Query:  164 MVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDP----DFTWEVVKPL 775
            + P RV  VLIS QHDE VTND+I+ DL E VIK VIP   LD +T + LNPSGRFV GGPHGDAGLTGRKII+DTY            GKDP+KVDRS AY  R  AKSIVA GLARRC+VQ++YAIGV EPLS+ V++YGTGK  D ++L+IVK++F  RP  +   L+L+R     +  T+ +GHFGR D      FTWEV K +
Sbjct:  186 LTPKRVAVVLISAQHDEHVTNDKISVDLMEKVIKAVIPANMLDAETKYWLNPSGRFVRGGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSIVAGGLARRCLVQLAYAIGVAEPLSMHVETYGTGKYDDAKLLEIVKQNFKLRPYDIIQELNLRR---PIYYDTSRFGHFGRKDELGTGGFTWEVPKKM 390          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_GEOTN (S-adenosylmethionine synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=metK PE=3 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.535e-57
Identity = 109/204 (53.43%), Postives = 145/204 (71.08%), Query Frame = -1
Query:  179 NDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 790
            ++NG   PVRV T++ISTQH   + +D+I  D+KEHVIKP++P + LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLA +C VQ++YAIGV  P+S+ +D++GTGK+ +  ++++V+ +FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  187 DENGK--PVRVDTIVISTQHHPEIEHDQIERDMKEHVIKPIVPAELLDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDVLIEVVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDVDLPWE 385          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK3_CAEEL (Probable S-adenosylmethionine synthetase 3 OS=Caenorhabditis elegans GN=sams-3 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.245e-56
Identity = 115/210 (54.76%), Postives = 147/210 (70.00%), Query Frame = -1
Query:  161 NDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 790
            ++ GA VP+RVHTV+ISTQH   ++ D++  +L E VIK VIP   +D+KTI+HLNP G F+IGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AKS+V +GL RRC+VQVSYAIGV +PLSV V S+GT  + + E+LKIV ++FD RPGM+  +LDLK+     +  TA  GHFG +  +F WE  + L+
Sbjct:  178 SEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKSGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKK---PIYEPTAENGHFGHN--EFPWEQPRHLQ 382          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_GEOSW (S-adenosylmethionine synthetase OS=Geobacillus sp. (strain WCH70) GN=metK PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.774e-56
Identity = 108/216 (50.00%), Postives = 149/216 (68.98%), Query Frame = -1
Query:  143 NDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 790
            ++NG   PVR+ T+++S QH   +T ++I  D+KEHVIKP++P + +DE T + +NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA+GLA +C VQ++YAIGV  P+S+ +D++GTGK+ +  ++++V+ +FD RP  +   LDL+R     + +TAAYGHFGR D D  WE     +  K QA
Sbjct:  187 DENGK--PVRIDTIVVSAQHHPEITQEQIERDIKEHVIKPIVPAELIDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVASGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDILIEVVRNNFDLRPAGIIKMLDLRR---PIYKQTAAYGHFGRTDIDLPWERTDKAETLKEQA 397          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_CARHZ (S-adenosylmethionine synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=metK PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.774e-56
Identity = 109/197 (55.33%), Postives = 142/197 (72.08%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            PVRV T+++STQH   V+ +EI  D+ EHV+KPVIPE  LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA G+A +  +Q++YAIGV +P+S+ VD++GTGKI D++I++++K+ FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  189 PVRVDTIVVSTQHHPDVSQEEIRKDIIEHVVKPVIPEHLLDENTRYFVNPTGRFVIGGPQGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGIADKIEIQLAYAIGVAKPVSIMVDTFGTGKIADEKIVELIKKHFDLRPAGIIRMLDLRR---PIYKQTAAYGHFGRTDIDLPWE 382          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK4_CAEEL (Probable S-adenosylmethionine synthetase 4 OS=Caenorhabditis elegans GN=sams-4 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.774e-56
Identity = 115/210 (54.76%), Postives = 145/210 (69.05%), Query Frame = -1
Query:  161 NDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 790
            ++ GA VP+RVHTV+ISTQH   ++ D++  +L E VIK VIP   +D+KTI+HLNP G F+IGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AKS+V  GL RRC+VQVSYAIGV +PLSV V S+GT  + ++++L IV ++FD RPG +  NLDLKR     +  TA  GHFG +  +F WE  + LK
Sbjct:  178 SEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDLKR---PIYEPTAENGHFGHN--NFPWEQPRNLK 382          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_CLOTH (S-adenosylmethionine synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=metK PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.054e-55
Identity = 115/197 (58.38%), Postives = 138/197 (70.05%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            PVRV TVLISTQH   V  D I  D+ EHVIKPVIP + LD KT + +NP+GRFVIGGP GD+GLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLAR+C VQ++YAIGV  P+SV VD++GTG IP+++I  +V + FD RP  +   LDL+R     + +TAAYGHFGR D D  WE
Sbjct:  189 PVRVDTVLISTQHGPEVDYDTIKRDVIEHVIKPVIPAELLDSKTKYLVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLARKCEVQLAYAIGVARPVSVRVDTFGTGIIPEEKIESLVNKYFDLRPAGIIKTLDLRR---PIYKQTAAYGHFGRTDIDLPWE 382          
The following BLAST results are available for this feature:
BLAST of CF832473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_NEUCR5.590e-5753.08S-adenosylmethionine synthetase OS=Neurospora cras... [more]
METK_CLOPS7.301e-5756.35S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOP17.301e-5756.35S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_LEIIN9.535e-5757.21S-adenosylmethionine synthetase OS=Leishmania infa... [more]
METK_GEOTN9.535e-5753.43S-adenosylmethionine synthetase OS=Geobacillus the... [more]
METK3_CAEEL1.245e-5654.76Probable S-adenosylmethionine synthetase 3 OS=Caen... [more]
METK_GEOSW2.774e-5650.00S-adenosylmethionine synthetase OS=Geobacillus sp.... [more]
METK_CARHZ2.774e-5655.33S-adenosylmethionine synthetase OS=Carboxydothermu... [more]
METK4_CAEEL2.774e-5654.76Probable S-adenosylmethionine synthetase 4 OS=Caen... [more]
METK_CLOTH1.054e-5558.38S-adenosylmethionine synthetase OS=Clostridium the... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832473 ID=CF832473; Name=CF832473; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTCTGAACACAGGAGATTTGCTCCTTATTACAAAG
CAGCAGCAAGATAATATTCAAATTATTCATCCACTACCAATAGAAGCAAA
CTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAAGCTTGAG
GCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTCTGGGTCA
TCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGCCATTACC
GCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTGAAATCAA
AGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTTGCCGGTT
CCATATGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAATGGCATA
GGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACAATGCTCT
TAGCAGCCTGCCTAACAATGTATGCACCACTCCTATCCACCTTAGTAGGG
TCTTTTCCAAAAAAAGCACCGCCACCATGGGCTCCCCAGCCACCATAAGT
GTCGATGATGATCTTACGTCCAGTGAGACCAGCATCACCATGAGGCCCAC
CAATGACAAAACGACCTGATGGATTAAGGTGGAAGATGGTCTTCTCATCA
AGGTACTTCTCGGGGATGACAGGCTTAATGACGTGCTCCTTAAGGTCAGC
AGCAATTTCATCATTTGTGACAGTCTCATCATGCTGGGTTGAAATGAGGA
CCGTGTGGACACGGACTGGGACCATGGCACCATTGTCATT
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