CF832473

Overview
NameCF832473
Unique NameCF832473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_BURCH (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain HI2424) GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.743e-48
Identity = 100/197 (50.76%), Postives = 130/197 (65.99%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            P  + TV++STQH   +    +   + E +IKP +P + +     F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA R ++QVSYAIGV EP SV V+++GTG++ D  I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  181 PDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_BURCC (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain MC0-3) GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.743e-48
Identity = 100/197 (50.76%), Postives = 130/197 (65.99%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            P  + TV++STQH   +    +   + E +IKP +P + +     F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA R ++QVSYAIGV EP SV V+++GTG++ D  I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  181 PDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_BURCA (S-adenosylmethionine synthetase OS=Burkholderia cenocepacia (strain AU 1054) GN=metK PE=3 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.743e-48
Identity = 100/197 (50.76%), Postives = 130/197 (65.99%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            P  + TV++STQH   +    +   + E +IKP +P + +     F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA R ++QVSYAIGV EP SV V+++GTG++ D  I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  181 PDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_WIGBR (S-adenosylmethionine synthetase OS=Wigglesworthia glossinidia brevipalpis GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.195e-48
Identity = 92/198 (46.46%), Postives = 136/198 (68.69%), Query Frame = -1
Query:  173 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 766
            V + TV+IS+QH E +   ++   + E +I+P++P+K++  KT + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY +R  AK+IVA+GLA RC +Q+SYAIGV  P+S+F++++GT KI +K+++ ++ E+FD RP  + + LDL +     + +TA YGHF +    F WE +
Sbjct:  179 VGIDTVIISSQHSEEINLSDLREGIMEEIIQPILPKKWISNKTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGSFSGKDPSKVDRSAAYALRYVAKNIVASGLADRCEIQISYAIGVSNPISIFIETFGTQKISNKKLINLIHENFDLRPHGLIVMLDLLK---PIYRETAVYGHFSK--IHFPWEKI 371          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_PSEHT (S-adenosylmethionine synthetase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.195e-48
Identity = 96/197 (48.73%), Postives = 133/197 (67.51%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            PV +  V++STQH E ++  ++   + E +IKPV+P + +   T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIG+ EP S+ V+++GT K+ +  ++++++E FD RP  +   LDL+R     +L TAAYGHFGR+  +F WE
Sbjct:  178 PVGIDAVVLSTQHSEDISQKDLIEAVMETIIKPVLPAELITSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADKCELQVSYAIGIAEPTSISVETFGTSKLEESRLIELIREHFDLRPYGLIKMLDLER---PIYLPTAAYGHFGRE--EFPWE 369          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_BURP8 (S-adenosylmethionine synthetase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metK PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 6.195e-48
Identity = 98/197 (49.75%), Postives = 131/197 (66.50%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            P  + TV++STQH   +   ++   + E +IKP +P + +     F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA R ++QVSYAIGV +P SV V+++GTG++ D  I ++V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  181 PHSIDTVVLSTQHSPDIDLGQLREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAQPTSVMVNTFGTGRVSDATITRLVQEHFDLRPKGIIQMLDLLR---PVYEKTAAYGHFGREEPEFSWE 374          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_RICTY (S-adenosylmethionine synthetase OS=Rickettsia typhi GN=metK PE=3 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 8.091e-48
Identity = 92/197 (46.70%), Postives = 131/197 (66.50%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            P+ + +V++STQH   +   ++   + E +IKP +P   L + T + +NP+GRFVIGGP  D GLTGRKII+D+Y            GKDPTK+DRS AY+ R  AK+IV +GLA RC +Q+SYAIGV  P+SV+ +++GT K+ +++  K++ E FD RPG +  NL L       + KTA+YGHFGR+D +FTWE
Sbjct:  178 PIVIDSVVLSTQHHPEIQQKDLIEAVIEEIIKPTLPTHLLHKDTKYLINPTGRFVIGGPVADCGLTGRKIIVDSYGGMAKHGGGCFSGKDPTKIDRSAAYMARYIAKNIVGSGLADRCEIQISYAIGVASPVSVYAETFGTSKLSNEQTTKLITEHFDMRPGKIIKNLKLH---TQCYQKTASYGHFGREDENFTWE 371          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_METPP (S-adenosylmethionine synthetase OS=Methylibium petroleiphilum (strain PM1) GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.091e-48
Identity = 103/203 (50.74%), Postives = 138/203 (67.98%), Query Frame = -1
Query:  179 PVRVHTVLISTQH--DETVTNDEIAADLKE----HVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            P  + TV++STQH  D++ T  ++ A   E     +IKPV+P+++L + T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLAR+C +QV+YAIGV  P+++ V + GTG IPD ++ ++V E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  181 PHSIDTVVLSTQHSPDQSETAKKMKASFTEAIIEEIIKPVLPKEWLKD-TKYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDDQLARLVAEHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 379          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_LACCB (S-adenosylmethionine synthetase OS=Lactobacillus casei (strain BL23) GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.091e-48
Identity = 97/197 (49.24%), Postives = 134/197 (68.02%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            P+RV +V++S QHD  VT +EI  D++  +I+ VIPE  +D+ T  ++NP+GRFV+GGP  D+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK++VA GLA+R  VQ++YAIGV +P+SV V+++GT  + +  I + ++E+FD RP  +   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  188 PIRVDSVVVSVQHDPDVTLEEIRRDVEAKIIRTVIPEALMDDDTKIYVNPTGRFVLGGPQADSGLTGRKIIVDTYGGFARHGGGAFSGKDATKVDRSASYAARYIAKNVVAAGLAKRVEVQLAYAIGVAKPVSVSVNTFGTSAVSEDVIEQAIRENFDLRPAGIIKMLDLKR---PIYEQTAAYGHFGRTDVDLPWE 381          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_LACC3 (S-adenosylmethionine synthetase OS=Lactobacillus casei (strain ATCC 334) GN=metK PE=3 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 8.091e-48
Identity = 97/197 (49.24%), Postives = 134/197 (68.02%), Query Frame = -1
Query:  179 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 769
            P+RV +V++S QHD  VT +EI  D++  +I+ VIPE  +D+ T  ++NP+GRFV+GGP  D+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK++VA GLA+R  VQ++YAIGV +P+SV V+++GT  + +  I + ++E+FD RP  +   LDLKR     + +TAAYGHFGR D D  WE
Sbjct:  188 PIRVDSVVVSVQHDPDVTLEEIRRDVEAKIIRTVIPEALMDDDTKIYVNPTGRFVLGGPQADSGLTGRKIIVDTYGGFARHGGGAFSGKDATKVDRSASYAARYIAKNVVAAGLAKRVEVQLAYAIGVAKPVSVSVNTFGTSAVSEDVIEQAIRENFDLRPAGIIKMLDLKR---PIYEQTAAYGHFGRTDVDLPWE 381          
The following BLAST results are available for this feature:
BLAST of CF832473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BURCH4.743e-4850.76S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_BURCC4.743e-4850.76S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_BURCA4.743e-4850.76S-adenosylmethionine synthetase OS=Burkholderia ce... [more]
METK_WIGBR6.195e-4846.46S-adenosylmethionine synthetase OS=Wigglesworthia ... [more]
METK_PSEHT6.195e-4848.73S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_BURP86.195e-4849.75S-adenosylmethionine synthetase OS=Burkholderia ph... [more]
METK_RICTY8.091e-4846.70S-adenosylmethionine synthetase OS=Rickettsia typh... [more]
METK_METPP8.091e-4850.74S-adenosylmethionine synthetase OS=Methylibium pet... [more]
METK_LACCB8.091e-4849.24S-adenosylmethionine synthetase OS=Lactobacillus c... [more]
METK_LACC38.091e-4849.24S-adenosylmethionine synthetase OS=Lactobacillus c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832473 ID=CF832473; Name=CF832473; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTCTGAACACAGGAGATTTGCTCCTTATTACAAAG
CAGCAGCAAGATAATATTCAAATTATTCATCCACTACCAATAGAAGCAAA
CTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAAGCTTGAG
GCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTCTGGGTCA
TCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGCCATTACC
GCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTGAAATCAA
AGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTTGCCGGTT
CCATATGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAATGGCATA
GGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACAATGCTCT
TAGCAGCCTGCCTAACAATGTATGCACCACTCCTATCCACCTTAGTAGGG
TCTTTTCCAAAAAAAGCACCGCCACCATGGGCTCCCCAGCCACCATAAGT
GTCGATGATGATCTTACGTCCAGTGAGACCAGCATCACCATGAGGCCCAC
CAATGACAAAACGACCTGATGGATTAAGGTGGAAGATGGTCTTCTCATCA
AGGTACTTCTCGGGGATGACAGGCTTAATGACGTGCTCCTTAAGGTCAGC
AGCAATTTCATCATTTGTGACAGTCTCATCATGCTGGGTTGAAATGAGGA
CCGTGTGGACACGGACTGGGACCATGGCACCATTGTCATT
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