CF832473

Overview
NameCF832473
Unique NameCF832473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_PROM4 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9211) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.057e-47
Identity = 105/214 (49.07%), Postives = 138/214 (64.49%), Query Frame = -1
Query:  173 PVRVHTVLISTQHDETVTN--------DEIAADLKEHVIKPVIPEKYLD---EKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKR---GGNGRFLK-TAAYGHFGRDDPDFTWEVV 769
            P+ + T++ISTQH   + +        + I  DL E+V+KP   +  L    EKT F +NP+G+FV+GGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AKSIVA  LA+R  VQ+SYAIGV  P+S+ V++YG+GK+ ++E+ K+VK+ FD RPG +    +LK      +GRF + TAAYGHFGR D +  WE V
Sbjct:  185 PIAIDTIVISTQHTSEIDDLSSEADIRERITKDLWEYVVKPATSDLKLQPNQEKTRFLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKSIVAAKLAKRVEVQLSYAIGVANPVSILVEAYGSGKMSNQELTKVVKKHFDLRPGAIIEQFNLKNLPSKRSGRFYRDTAAYGHFGRPDLNLPWEKV 398          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_HAEIN (S-adenosylmethionine synthetase OS=Haemophilus influenzae GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.057e-47
Identity = 99/198 (50.00%), Postives = 135/198 (68.18%), Query Frame = -1
Query:  173 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 766
            V V  V++STQH E V+  ++   + E +IKPV+P ++L ++T F +NP+GRFVIGGP GD GLTGRKII+DTY            GK+P+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV EP S+ V+++GTGK+ ++ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE V
Sbjct:  179 VGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPSEWLSKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKEPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMVETFGTGKVANELLVSLVREFFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE--QFPWEKV 371          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_HAEIE (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain PittEE) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.057e-47
Identity = 99/198 (50.00%), Postives = 135/198 (68.18%), Query Frame = -1
Query:  173 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 766
            V V  V++STQH E V+  ++   + E +IKPV+P ++L ++T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE V
Sbjct:  179 VGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPTEWLSKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVANELLVSLVREFFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE--QFPWEKV 371          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_HAEI8 (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain 86-028NP) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.057e-47
Identity = 99/198 (50.00%), Postives = 135/198 (68.18%), Query Frame = -1
Query:  173 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 766
            V V  V++STQH E V+  ++   + E +IKPV+P ++L ++T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTGK+ ++ ++ +V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE V
Sbjct:  179 VGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPTEWLSKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVANELLVSLVREFFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE--QFPWEKV 371          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_DESAP (S-adenosylmethionine synthetase OS=Desulforudis audaxviator (strain MP104C) GN=metK PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.057e-47
Identity = 102/203 (50.25%), Postives = 132/203 (65.02%), Query Frame = -1
Query:  179 DNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 787
            DNG   PV+V TV+IS QH   V    I ADL E V++P+IP   +   T + +NP+GRFVIGGP  D GLTGRKI++DTY            GKDPTKVDRS +Y  R  AK+IVA GLA RC V V+YAIGV +P+++ VD++GTG I ++ + K+V E FD RP  +  +LDL+R     + + AAYGHFGR D +  WE
Sbjct:  183 DNGR--PVKVDTVVISAQHHPAVDLGTIRADLIEKVVEPIIPVGLITNSTRYLINPTGRFVIGGPQADTGLTGRKIVVDTYGGMARHGGGAFSGKDPTKVDRSASYAARYVAKNIVAAGLASRCEVHVAYAIGVAKPVALRVDTFGTGLINEERLEKLVLEHFDLRPAAIIHHLDLRR---PIYRQVAAYGHFGRGDLNLPWE 380          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_XYLFT (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.380e-47
Identity = 99/210 (47.14%), Postives = 135/210 (64.29%), Query Frame = -1
Query:  152 VHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE-------VVKPLKWEK 760
            +  V++STQHD  +   ++   ++E ++KPV+P K+L + T FH+NP+G+FVIGGP GD GLTGRKII+DTY            GKDP+KVDRS +Y VR  AK++VA GLA RC VQVSYAIGV EP+S+ V ++GTGKIPD +I K++ + FD RP  +   LDL    +  +  +A+YGHFGR   +  +        V     WEK
Sbjct:  183 IDAVVLSTQHDPGIKQKDLVEAVREEILKPVLPSKWLHKGTKFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGSARHGGGAFSGKDPSKVDRSASYAVRYVAKNVVAAGLADRCEVQVSYAIGVAEPISISVTTFGTGKIPDDKIEKLICQHFDLRPYGIIKMLDLI---HPIYQPSASYGHFGRKPRELAYTNSNGERVVATAFSWEK 389          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_XYLF2 (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain M23) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.380e-47
Identity = 99/210 (47.14%), Postives = 135/210 (64.29%), Query Frame = -1
Query:  152 VHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE-------VVKPLKWEK 760
            +  V++STQHD  +   ++   ++E ++KPV+P K+L + T FH+NP+G+FVIGGP GD GLTGRKII+DTY            GKDP+KVDRS +Y VR  AK++VA GLA RC VQVSYAIGV EP+S+ V ++GTGKIPD +I K++ + FD RP  +   LDL    +  +  +A+YGHFGR   +  +        V     WEK
Sbjct:  183 IDAVVLSTQHDPGIKQKDLVEAVREEILKPVLPSKWLHKGTKFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGSARHGGGAFSGKDPSKVDRSASYAVRYVAKNVVAAGLADRCEVQVSYAIGVAEPISISVTTFGTGKIPDDKIEKLICQHFDLRPYGIIKMLDLI---HPIYQPSASYGHFGRKPRELAYTNSNGERVVATAFSWEK 389          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SYNE7 (S-adenosylmethionine synthetase OS=Synechococcus elongatus (strain PCC 7942) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.380e-47
Identity = 104/211 (49.29%), Postives = 136/211 (64.45%), Query Frame = -1
Query:  179 PVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPVIPEKYL--DEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKR---GGNGRFL-KTAAYGHFGRDDPDFTWE 769
            PV + T+LISTQH        D+    + I +DL E V+ PV  +  +  D  T F +NP+G+FVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLA +C VQ+SYAIGV  P+SV V+++GTGK+ D+ +L +V++ F+ RP  +  + +L+R      GRF  + AAYGHFGR+D D  WE
Sbjct:  189 PVAIDTILISTQHKAAIGDISDDNAVQERIKSDLWEQVVLPVFSDLVIQPDSATRFLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLAEKCEVQLSYAIGVARPVSVLVETFGTGKVADEVLLDLVRKHFELRPAGIIEHFNLQRLPGERGGRFYQEVAAYGHFGRNDLDLPWE 399          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SULNB (S-adenosylmethionine synthetase OS=Sulfurovum sp. (strain NBC37-1) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.380e-47
Identity = 98/200 (49.00%), Postives = 135/200 (67.50%), Query Frame = -1
Query:  173 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTI-FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 769
            PV V T+++STQH ETV+ +++   +KE VI PV+    +D   I +H+NP+GRFVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK++VA G   +  +QV+YAIGV +P+S++VD++GT  I +++I+  V+  FD  P  +  +LDL +     + KTAAYGHFGR+D  F+WE +
Sbjct:  178 PVAVDTIVVSTQHHETVSLEQVQKAVKEEVIDPVLATYDIDISDITYHINPTGRFVIGGPQGDAGLTGRKIIVDTYGGSCPHGGGAFSGKDPTKVDRSAAYAARYVAKNLVAAGACDKATLQVAYAIGVAKPVSIYVDTHGTAHIDEEKIVSCVESLFDLTPKGIIDSLDLLK---PIYKKTAAYGHFGREDMGFSWEKI 374          
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_PSYCK (S-adenosylmethionine synthetase OS=Psychrobacter cryohalolentis (strain K5) GN=metK PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.380e-47
Identity = 100/211 (47.39%), Postives = 138/211 (65.40%), Query Frame = -1
Query:  143 PVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD--FTWEVVKPLKWEKPQA 769
            PV +  V++STQHD +++  ++   + E +IK V+P + L   T +H+NP+G+FVIGGP GDAGLTGRKII+DTY            GKDP+KVDRS AY VR  AK+IVA G+A RC VQVSYAIGV EP S+ ++++GT KI + EI+ +++  FD RP  +T  L+L +     + +TA++GHFGR   +  FTWE     K  K  A
Sbjct:  179 PVAIDAVVLSTQHDPSISQADLQEAIMESIIKQVLPAELLHAGTRYHINPTGKFVIGGPVGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAVRYVAKNIVAAGIADRCEVQVSYAIGVAEPTSISINTFGTNKISNDEIISLIRTHFDLRPYGITRMLNLLQ---PMYQQTASFGHFGRQGSETAFTWEKTDKAKILKADA 386          
The following BLAST results are available for this feature:
BLAST of CF832473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PROM41.057e-4749.07S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_HAEIN1.057e-4750.00S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_HAEIE1.057e-4750.00S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_HAEI81.057e-4750.00S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_DESAP1.057e-4750.25S-adenosylmethionine synthetase OS=Desulforudis au... [more]
METK_XYLFT1.380e-4747.14S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_XYLF21.380e-4747.14S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_SYNE71.380e-4749.29S-adenosylmethionine synthetase OS=Synechococcus e... [more]
METK_SULNB1.380e-4749.00S-adenosylmethionine synthetase OS=Sulfurovum sp. ... [more]
METK_PSYCK1.380e-4747.39S-adenosylmethionine synthetase OS=Psychrobacter c... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832473 ID=CF832473; Name=CF832473; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTCTGAACACAGGAGATTTGCTCCTTATTACAAAG
CAGCAGCAAGATAATATTCAAATTATTCATCCACTACCAATAGAAGCAAA
CTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAAGCTTGAG
GCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTCTGGGTCA
TCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGCCATTACC
GCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTGAAATCAA
AGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTTGCCGGTT
CCATATGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAATGGCATA
GGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACAATGCTCT
TAGCAGCCTGCCTAACAATGTATGCACCACTCCTATCCACCTTAGTAGGG
TCTTTTCCAAAAAAAGCACCGCCACCATGGGCTCCCCAGCCACCATAAGT
GTCGATGATGATCTTACGTCCAGTGAGACCAGCATCACCATGAGGCCCAC
CAATGACAAAACGACCTGATGGATTAAGGTGGAAGATGGTCTTCTCATCA
AGGTACTTCTCGGGGATGACAGGCTTAATGACGTGCTCCTTAAGGTCAGC
AGCAATTTCATCATTTGTGACAGTCTCATCATGCTGGGTTGAAATGAGGA
CCGTGTGGACACGGACTGGGACCATGGCACCATTGTCATT
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