CF832473

Overview
NameCF832473
Unique NameCF832473
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SHEON (S-adenosylmethionine synthetase OS=Shewanella oneidensis GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47
Identity = 96/196 (48.98%), Postives = 133/196 (67.86%), Query Frame = -1 
Query:  179 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 766
            V +  +++STQH   +   ++   + E +IKPV+P ++L++ T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GTGK+ ++ ++K+V++ FD RP  +T  L+L R     +  TAAYGHFGR   +F WE
Sbjct:  179 VGIDAIVLSTQHSPDIAQADLIEGVMETIIKPVLPAQWLNKDTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISVETFGTGKVSEEVLIKLVRQHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRS--EFPWE 369
[Close]
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SALTY (S-adenosylmethionine synthetase OS=Salmonella typhimurium GN=metK PE=3 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47
Identity = 97/196 (49.49%), Postives = 132/196 (67.35%), Query Frame = -1 
Query:  179 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 766
            V +  V++STQH E +    +   + E +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  179 VGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SALTI (S-adenosylmethionine synthetase OS=Salmonella typhi GN=metK PE=3 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47
Identity = 97/196 (49.49%), Postives = 132/196 (67.35%), Query Frame = -1 
Query:  179 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 766
            V +  V++STQH E +    +   + E +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  179 VGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SALSV (S-adenosylmethionine synthetase OS=Salmonella schwarzengrund (strain CVM19633) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47
Identity = 97/196 (49.49%), Postives = 132/196 (67.35%), Query Frame = -1 
Query:  179 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 766
            V +  V++STQH E +    +   + E +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  179 VGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SALPK (S-adenosylmethionine synthetase OS=Salmonella paratyphi A (strain AKU_12601) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47
Identity = 97/196 (49.49%), Postives = 132/196 (67.35%), Query Frame = -1 
Query:  179 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 766
            V +  V++STQH E +    +   + E +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  179 VGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SALPA (S-adenosylmethionine synthetase OS=Salmonella paratyphi A GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47
Identity = 97/196 (49.49%), Postives = 132/196 (67.35%), Query Frame = -1 
Query:  179 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 766
            V +  V++STQH E +    +   + E +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  179 VGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SALNS (S-adenosylmethionine synthetase OS=Salmonella newport (strain SL254) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47
Identity = 97/196 (49.49%), Postives = 132/196 (67.35%), Query Frame = -1 
Query:  179 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 766
            V +  V++STQH E +    +   + E +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  179 VGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SALG2 (S-adenosylmethionine synthetase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47
Identity = 97/196 (49.49%), Postives = 132/196 (67.35%), Query Frame = -1 
Query:  179 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 766
            V +  V++STQH E +    +   + E +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  179 VGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SALEP (S-adenosylmethionine synthetase OS=Salmonella enteritidis PT4 (strain P125109) GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47
Identity = 97/196 (49.49%), Postives = 132/196 (67.35%), Query Frame = -1 
Query:  179 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 766
            V +  V++STQH E +    +   + E +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  179 VGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
[Close]
BLAST of CF832473 vs. ExPASy Swiss-Prot
Match: METK_SALCH (S-adenosylmethionine synthetase OS=Salmonella choleraesuis GN=metK PE=3 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.354e-47
Identity = 97/196 (49.49%), Postives = 132/196 (67.35%), Query Frame = -1 
Query:  179 VRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 766
            V +  V++STQH E +    +   + E +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE
Sbjct:  179 VGIDAVVLSTQHAEDIDQKSLQEAVMEEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWE 369
The following BLAST results are available for this feature:
BLAST of CF832473 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SHEON2.354e-4748.98S-adenosylmethionine synthetase OS=Shewanella onei... [more]
METK_SALTY2.354e-4749.49S-adenosylmethionine synthetase OS=Salmonella typh... [more]
METK_SALTI2.354e-4749.49S-adenosylmethionine synthetase OS=Salmonella typh... [more]
METK_SALSV2.354e-4749.49S-adenosylmethionine synthetase OS=Salmonella schw... [more]
METK_SALPK2.354e-4749.49S-adenosylmethionine synthetase OS=Salmonella para... [more]
METK_SALPA2.354e-4749.49S-adenosylmethionine synthetase OS=Salmonella para... [more]
METK_SALNS2.354e-4749.49S-adenosylmethionine synthetase OS=Salmonella newp... [more]
METK_SALG22.354e-4749.49S-adenosylmethionine synthetase OS=Salmonella gall... [more]
METK_SALEP2.354e-4749.49S-adenosylmethionine synthetase OS=Salmonella ente... [more]
METK_SALCH2.354e-4749.49S-adenosylmethionine synthetase OS=Salmonella chol... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832473 ID=CF832473; Name=CF832473; organism=Citrus sinensis; type=EST; length=790bp
TTTTTTTTTTTTTTTTTCTGAACACAGGAGATTTGCTCCTTATTACAAAG
CAGCAGCAAGATAATATTCAAATTATTCATCCACTACCAATAGAAGCAAA
CTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAAGCTTGAG
GCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTCTGGGTCA
TCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGCCATTACC
GCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTGAAATCAA
AGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTTGCCGGTT
CCATATGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAATGGCATA
GGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACAATGCTCT
TAGCAGCCTGCCTAACAATGTATGCACCACTCCTATCCACCTTAGTAGGG
TCTTTTCCAAAAAAAGCACCGCCACCATGGGCTCCCCAGCCACCATAAGT
GTCGATGATGATCTTACGTCCAGTGAGACCAGCATCACCATGAGGCCCAC
CAATGACAAAACGACCTGATGGATTAAGGTGGAAGATGGTCTTCTCATCA
AGGTACTTCTCGGGGATGACAGGCTTAATGACGTGCTCCTTAAGGTCAGC
AGCAATTTCATCATTTGTGACAGTCTCATCATGCTGGGTTGAAATGAGGA
CCGTGTGGACACGGACTGGGACCATGGCACCATTGTCATT
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