CF832474

Overview
NameCF832474
Unique NameCF832474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:172..922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 439.499 bits (1129), Expect = 9.228e-123
Identity = 209/225 (92.89%), Postives = 220/225 (97.78%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            ME+FLFTSESVNEGHPDKLCDQISDA+LDACLEQDPESKVACETCTKTNMVMVFGEITTKA VDYEKIVR+TCR IGF+SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGA+LTEVRKN TC+WLRPDGKTQVTVEY+N+NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD
Sbjct:    1 MESFLFTSESVNEGHPDKLCDQISDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCREIGFISDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGAKLTEVRKNGTCAWLRPDGKTQVTVEYFNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 225          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 438.728 bits (1127), Expect = 1.574e-122
Identity = 211/225 (93.78%), Postives = 217/225 (96.44%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            METFLFTSESVNEGHPDKLCDQISDAVLDACL+QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY+ND GA VP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLQQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCREIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYHNDGGARVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 225          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 437.958 bits (1125), Expect = 2.685e-122
Identity = 211/224 (94.20%), Postives = 218/224 (97.32%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            ETFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHF+KRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 226          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 437.958 bits (1125), Expect = 2.685e-122
Identity = 211/224 (94.20%), Postives = 218/224 (97.32%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            ETFLFTSESVNEGHPDKLCDQISDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR+IGF S DVGLDAD+CKVLVNIEQQSPDIAQGVHGHF+KRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEYYN+NGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD
Sbjct:    3 ETFLFTSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKADVDYEKIVRDTCRNIGFTSADVGLDADNCKVLVNIEQQSPDIAQGVHGHFSKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 226          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK1_SOLLC (S-adenosylmethionine synthetase 1 OS=Solanum lycopersicum GN=SAM1 PE=2 SV=1)

HSP 1 Score: 437.958 bits (1125), Expect = 2.685e-122
Identity = 212/225 (94.22%), Postives = 218/225 (96.89%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTN+VMVFGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLV IEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTNDEIA DLKEHVIKPVIPEKYLD
Sbjct:    1 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNLVMVFGEITTKAIVDYEKIVRDTCRNIGFVSDDVGLDADNCKVLVYIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYSNDNGAMVPIRVHTVLISTQHDETVTNDEIARDLKEHVIKPVIPEKYLD 225          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK2_POPTR (S-adenosylmethionine synthetase 2 OS=Populus trichocarpa GN=METK2 PE=2 SV=1)

HSP 1 Score: 437.573 bits (1124), Expect = 3.507e-122
Identity = 210/225 (93.33%), Postives = 216/225 (96.00%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            METFLFTSESVNEGHPDKLCDQ+SDA+LDACLEQDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVR TCRSIGFVSDDVGLDAD C VLVNIEQQSPDIAQGVHGH TKRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY N+NGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRSTCRSIGFVSDDVGLDADKCNVLVNIEQQSPDIAQGVHGHLTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYLNENGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 225          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 437.187 bits (1123), Expect = 4.580e-122
Identity = 209/225 (92.89%), Postives = 218/225 (96.89%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            METFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCT+TNMVMVFGEITTKA VDYE+IVRDTCRSIGF SDDVGLDAD+CKVLVNIEQQSPDIAQGVHGH TK+PE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEYYN NGAMVPVRVHTVLISTQHDETVTNDEIAADLK+HVIKPVIPEKYLD
Sbjct:    1 METFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTRTNMVMVFGEITTKANVDYEQIVRDTCRSIGFTSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHLTKKPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNGNGAMVPVRVHTVLISTQHDETVTNDEIAADLKQHVIKPVIPEKYLD 225          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 437.187 bits (1123), Expect = 4.580e-122
Identity = 211/224 (94.20%), Postives = 216/224 (96.43%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            ETFLFTSESVNEGHPDKLCDQ+SDAVLDACL QDP+SKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGFVSDDVGLDAD CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC+WLRPDGKTQVTVEY ND GAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP+KYLD
Sbjct:    4 ETFLFTSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMVMVFGEITTKATVDYEKIVRDTCRGIGFVSDDVGLDADRCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYLNDAGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPDKYLD 227          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 436.802 bits (1122), Expect = 5.981e-122
Identity = 207/226 (91.59%), Postives = 220/226 (97.35%), Query Frame = 2
Query:   74 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            +++TFLFTSESVNEGHPDKLCDQISDA+LDACLEQDP+SKVACETC+KTNMVM+FGEITTKA VDYEKIVRDTCR+IGFVSDDVGLDAD+CKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN TC WLRPDGKTQVTVEY ND GAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPV+PE+YLD
Sbjct:    3 EVDTFLFTSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCSKTNMVMIFGEITTKANVDYEKIVRDTCRAIGFVSDDVGLDADNCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYRNDGGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEQYLD 228          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 436.802 bits (1122), Expect = 5.981e-122
Identity = 209/226 (92.48%), Postives = 219/226 (96.90%), Query Frame = 2
Query:   74 KMETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            +++TFLFTSESVNEGHPDKLCDQISDAVLDACL +DPESKVACETCTKTNMVMVFGEITTKA VDYEKIVRDTCR IGFVS+DVGLDA+HCKVLVNIEQQSPDIAQGVHGHFTKRPE+IGAGDQGHMFGYATDETPE MPLSHVLATKLGARLTEVRKN  C+WLRPDGKTQVTVEY NDNGAMVP+RVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE+YLD
Sbjct:    3 EVDTFLFTSESVNEGHPDKLCDQISDAVLDACLAEDPESKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRGIGFVSNDVGLDAEHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGACAWLRPDGKTQVTVEYQNDNGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLD 228          
The following BLAST results are available for this feature:
BLAST of CF832474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_BRAJU9.228e-12392.89S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK2_VITVI1.574e-12293.78S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]
METK_POPDE2.685e-12294.20S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK3_POPTR2.685e-12294.20S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK1_SOLLC2.685e-12294.22S-adenosylmethionine synthetase 1 OS=Solanum lycop... [more]
METK2_POPTR3.507e-12293.33S-adenosylmethionine synthetase 2 OS=Populus trich... [more]
METK_LITCN4.580e-12292.89S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK2_ORYSJ4.580e-12294.20S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]
METK_DENCR5.981e-12291.59S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK3_ORYSJ5.981e-12292.48S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832474 ID=CF832474; Name=CF832474; organism=Citrus sinensis; type=EST; length=751bp
CTTTGCTATTGCGGTCTGGTCTTAAGTCTGAATCTTAGATCTGCGCCGAA
ACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTCACCTCT
GAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGATCTCTGA
TGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGGTTGCCT
GTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACC
ACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTGCCGTTC
CATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCGATCACTGCAAAG
TCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCCCAGGGTGTTCAT
GGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCA
TATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCC
ATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAAT
AGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGA
GTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCC
TCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCT
GACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGA
T
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