CF832474

Overview
NameCF832474
Unique NameCF832474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_SHESR (S-adenosylmethionine synthetase OS=Shewanella sp. (strain MR-7) GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.830e-55
Identity = 117/225 (52.00%), Postives = 149/225 (66.22%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            M   LFTSESV+EGHPDK+ DQISDAVLDA L QDP+++VACET  KT MV+V GE+TT A VD E++ R T R IG+V  D+G DAD C VL  I +QSPDI QGV       P++ GAGDQG MFGYA++ET   MP     A  L  R +EVRK+ T  WLRPD K+QVT   Y DN     V +  +++STQH   +   ++   + E +IKPV+P ++L+
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYVHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYASNETDILMPAPITYAHALVKRQSEVRKDGTLPWLRPDAKSQVTFA-YEDNKI---VGIDAIVLSTQHSPDIAQADLIEGVMETIIKPVLPAQWLN 218          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_SHESM (S-adenosylmethionine synthetase OS=Shewanella sp. (strain MR-4) GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.830e-55
Identity = 117/225 (52.00%), Postives = 149/225 (66.22%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            M   LFTSESV+EGHPDK+ DQISDAVLDA L QDP+++VACET  KT MV+V GE+TT A VD E++ R T R IG+V  D+G DAD C VL  I +QSPDI QGV       P++ GAGDQG MFGYA++ET   MP     A  L  R +EVRK+ T  WLRPD K+QVT   Y DN     V +  +++STQH   +   ++   + E +IKPV+P ++L+
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYVHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYASNETDILMPAPITYAHALVKRQSEVRKDGTLPWLRPDAKSQVTFA-YEDNKI---VGIDAIVLSTQHSPDIAQADLIEGVMETIIKPVLPAQWLN 218          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_SHESA (S-adenosylmethionine synthetase OS=Shewanella sp. (strain ANA-3) GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.830e-55
Identity = 117/225 (52.00%), Postives = 149/225 (66.22%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            M   LFTSESV+EGHPDK+ DQISDAVLDA L QDP+++VACET  KT MV+V GE+TT A VD E++ R T R IG+V  D+G DAD C VL  I +QSPDI QGV       P++ GAGDQG MFGYA++ET   MP     A  L  R +EVRK+ T  WLRPD K+QVT   Y DN     V +  +++STQH   +   ++   + E +IKPV+P ++L+
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYVHSDMGFDADSCAVLNAIGKQSPDINQGVD---RADPKEQGAGDQGLMFGYASNETDILMPAPITYAHALVKRQSEVRKDGTLPWLRPDAKSQVTFA-YEDNKI---VGIDAIVLSTQHSPDIAQADLIEGVMETIIKPVLPAQWLN 218          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_PROM2 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9215) GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.830e-55
Identity = 118/229 (51.53%), Postives = 157/229 (68.56%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGVHGHFTKR---PEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHD---ETVTNDE-----IAADLKEHVIKP 727
            M  F+FTSESV EGHPDK+CDQISDAVLDA L +DPES+VACET   T + ++ GEIT+KAKVDY K+VR+  + IG+      G DA+ C VLV +++QSPDI+QGV+          ++ GAGDQG MFGYA DETPE MPL   LA +L  +L +VR  +  ++L PDGKTQV+++Y       +PV ++T+LISTQH+   + +TN+E     I  DL +HV+ P
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYKAGGFDANSCAVLVALDEQSPDISQGVNEADDVNDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHENLLNYLLPDGKTQVSIDYEKG----LPVSINTILISTQHNPEIDGLTNEEEIRQRIKEDLWKHVVIP 225          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_NEIMA (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup A GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.830e-55
Identity = 114/228 (50.00%), Postives = 155/228 (67.98%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI----GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M  +LFTSESV+EGHPDK+ DQ+SDA+LDA L QDP+++VA ET   T + ++ GEITT A+VDY K+ R+T + IG+ S ++G DA+ C V V  +QQSPDIAQGV+       E I    GAGDQG MFGYA DETP  MP +   + +L  R +E+RK+    WLRPD K Q+TV Y ++ G +   R+ TV++STQHD +V  +E+   + E +IKPV+P + L
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN-----EGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETGKV--KRIDTVVLSTQHDPSVGYEELKNAVIEQIIKPVLPSELL 221          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LEPBL (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.830e-55
Identity = 117/227 (51.54%), Postives = 152/227 (66.96%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            ++ F+FTSESV EGHPDK+CDQISDA+LDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ETPEFMP+    + +L   L  +R ++   +LRPD K+QVTVEY +      PVRV TV+ISTQH   V + +I   L E  IK VIP   L
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPEFMPMPIYYSHELVKHLAGLRHSNKLKFLRPDAKSQVTVEYKDGK----PVRVDTVVISTQHSPDVAHKQIEESLIEECIKKVIPANLL 221          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LEPBJ (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.830e-55
Identity = 117/227 (51.54%), Postives = 152/227 (66.96%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            ++ F+FTSESV EGHPDK+CDQISDA+LDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ETPEFMP+    + +L   L  +R ++   +LRPD K+QVTVEY +      PVRV TV+ISTQH   V + +I   L E  IK VIP   L
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPEFMPMPIYYSHELVKHLAGLRHSNKLKFLRPDAKSQVTVEYKDGK----PVRVDTVVISTQHSPDVAHKQIEESLIEECIKKVIPANLL 221          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_DESOH (S-adenosylmethionine synthetase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.830e-55
Identity = 118/226 (52.21%), Postives = 148/226 (65.49%), Query Frame = 2
Query:   83 TFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVH---GHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            T LFTSESV EGHPDK+ D ISDAVLDA + QD   +VACET   T +  + GEIT  A V++  IVRDT R IG+ S D+G D   C V+ +I++QSPDIAQGV+   G F ++    GAGDQG MFG+A DETPE MP     A KL  +L +VRKN    +LRPDGK+QVTV+Y +      P R+ T++IS+QH   VT DE+   +   VI PVIP + LD
Sbjct:    4 THLFTSESVTEGHPDKVADCISDAVLDALISQDKNCRVACETLVTTGVAFIAGEITANATVNFPDIVRDTIRRIGYTSSDMGFDWQTCSVVTSIDKQSPDIAQGVNEGDGLFKEQ----GAGDQGLMFGFACDETPELMPAPISYAHKLTKQLADVRKNGVLDFLRPDGKSQVTVQYEDGQ----PKRIDTIVISSQHSPDVTYDELKDRIIAEVILPVIPGELLD 221          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_DESAD (S-adenosylmethionine synthetase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.830e-55
Identity = 110/222 (49.55%), Postives = 146/222 (65.77%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            + FTSESV EGHPDK+ DQISD++LDA L QD +++VACET   T M  + GEI+T    D+++IVRDT R IG+V  D+G DAD C V+ +I++QS DIAQGV       PE  GAGDQG MFG+A  ET   MP     A KL  +LTEVRK++T  +LRPDGKT+V  EY +      PVR+  V+I+ QHD+ +   +I  D+K  V+   +P + +D
Sbjct:    8 YFFTSESVTEGHPDKVADQISDSILDAILAQDKDARVACETLVTTGMAFIAGEISTTGYADFQQIVRDTIREIGYVHSDMGFDADTCAVISSIDKQSVDIAQGVD---RNTPESQGAGDQGMMFGFACKETEALMPAPIYYAHKLSRKLTEVRKDATLDYLRPDGKTEVAFEYLDGK----PVRIADVVIAAQHDDGIEQGQIYEDIKREVVLASLPAEMID 222          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_CLAM3 (S-adenosylmethionine synthetase OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=metK PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.830e-55
Identity = 115/223 (51.57%), Postives = 146/223 (65.47%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI--------GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI 733
            LFTSESV EGHPDK+CDQISD++LDA L QDP S+ A ET   T +V V GE+TT   VD  +IVRD  R IG+ S +VG D  +C V V+I  QSPDIAQGV   +  R            GAGDQG MFGYA+ +TP FMPL   LA +L  RL  VR +   ++LRPDGKTQVT+ Y      +VP  V TV++STQH   V+ +++  +++EHVI+PV+
Sbjct:    6 LFTSESVTEGHPDKICDQISDSILDALLTQDPTSRAAVETLVTTGLVHVAGEVTTSGYVDIPQIVRDRIRDIGYDSSEVGFDGSNCGVTVSIGAQSPDIAQGVDRSYESRSGSASTDAHDLQGAGDQGLMFGYASRDTPVFMPLPIYLAHRLAERLAAVRHSGELAYLRPDGKTQVTIGY----EGLVPRTVDTVVLSTQHGPQVSQEDLRREVEEHVIRPVL 224          
The following BLAST results are available for this feature:
BLAST of CF832474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SHESR2.830e-5552.00S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_SHESM2.830e-5552.00S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_SHESA2.830e-5552.00S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_PROM22.830e-5551.53S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_NEIMA2.830e-5550.00S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_LEPBL2.830e-5551.54S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_LEPBJ2.830e-5551.54S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_DESOH2.830e-5552.21S-adenosylmethionine synthetase OS=Desulfococcus o... [more]
METK_DESAD2.830e-5549.55S-adenosylmethionine synthetase OS=Desulfovibrio s... [more]
METK_CLAM32.830e-5551.57S-adenosylmethionine synthetase OS=Clavibacter mic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832474 ID=CF832474; Name=CF832474; organism=Citrus sinensis; type=EST; length=751bp
CTTTGCTATTGCGGTCTGGTCTTAAGTCTGAATCTTAGATCTGCGCCGAA
ACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTCACCTCT
GAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGATCTCTGA
TGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGGTTGCCT
GTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACC
ACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTGCCGTTC
CATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCGATCACTGCAAAG
TCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCCCAGGGTGTTCAT
GGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCA
TATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCC
ATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAAT
AGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGA
GTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCC
TCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCT
GACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGA
T
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