CF832474

Overview
NameCF832474
Unique NameCF832474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_OCEIH (S-adenosylmethionine synthetase OS=Oceanobacillus iheyensis GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.306e-55
Identity = 115/229 (50.22%), Postives = 148/229 (64.63%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP--------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            LFTSESV EGHPDK+ DQISDA+LD  L++DP ++VACET   T +V+V GEI+T   VD   +VR+T + IG+     G D + C VL  I++QS DIA GV+     R         + IGAGDQG MFGYA DET E MPL   LA +L  RL +VRK     +LRPDGKTQVTVEY  ++    P R+ T++ISTQH   + N++I  D+ E VI+ V+P + LD
Sbjct:    7 LFTSESVTEGHPDKMSDQISDAILDEILKKDPNARVACETTVTTGLVLVSGEISTSTYVDIPALVRETVKEIGYTRAKYGFDFETCAVLTAIDEQSADIAGGVNQALEARQGKMSEEEIDAIGAGDQGLMFGYACDETEELMPLPISLAHQLSKRLADVRKEGIVDYLRPDGKTQVTVEYDEND---KPERIDTIVISTQHHSEIQNEQIERDMIEKVIQAVVPSELLD 232          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_NEIM0 (S-adenosylmethionine synthetase OS=Neisseria meningitidis serogroup C (strain 053442) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.306e-55
Identity = 113/228 (49.56%), Postives = 154/228 (67.54%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI----GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M  +LFTSESV+EGHPDK+ DQ+SDA+LDA L QDP+++VA ET   T + ++ GEITT A+VDY K+ R+T + IG+ S ++G DA+ C V V  +QQSPDIAQGV+       E I    GAGDQG MFGYA DETP  MP +   + +L  R +E+RK+    WLRPD K Q+TV Y ++ G +   R+ TV++STQHD  +  +E+   + E +IKPV+P + L
Sbjct:    1 MSEYLFTSESVSEGHPDKVADQVSDAILDAILAQDPKARVAAETLVNTGLCVLAGEITTTAQVDYIKVARETIKRIGYNSSELGFDANGCAVGVYYDQQSPDIAQGVN-----EGEGIDLNQGAGDQGLMFGYACDETPTLMPFAIYYSHRLMQRQSELRKDGRLPWLRPDAKAQLTVVYDSETGKV--KRIDTVVLSTQHDPEIGYEELKNAVIEQIIKPVLPSELL 221          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_MANSM (S-adenosylmethionine synthetase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.306e-55
Identity = 116/224 (51.79%), Postives = 148/224 (66.07%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M ++LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E I R     IG+ S ++G D   C VL  I +QS DI QGV       P + GAGDQG MFGYAT+ET   MP +   A +L  R   VRKN T  WLRPD K+QVT++Y N+      V V  V++STQH ++VT +++   + E +IKPV+P K+L
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIEYIARQVICDIGYTSSEMGFDGHSCAVLNGIGKQSSDINQGVD---RDDPLNQGAGDQGIMFGYATNETEVLMPAAITYAHRLMERQAWVRKNGTLPWLRPDAKSQVTLKYENNK----IVGVDAVVLSTQHSDSVTQEDLHEAVMEEIIKPVLPAKWL 217          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LEPIN (S-adenosylmethionine synthetase OS=Leptospira interrogans GN=metK PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 6.306e-55
Identity = 117/228 (51.32%), Postives = 152/228 (66.67%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            ++ F+FTSESV EGHPDK+CDQISDAVLDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ETPE MP+    + +L   L  +R  +   +LRPD K+QVTVEY +      PVR+ TV+ISTQH   VT+ +I   L E  IK VIP   L+
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAVLDAYLEQDPKSRVACETLVTTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPELMPMPIYYSHELVKHLAGLRHGNKLKFLRPDAKSQVTVEYKDGK----PVRIDTVVISTQHSPDVTHKQIEEALIEECIKKVIPANLLN 222          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LEPIC (S-adenosylmethionine synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=metK PE=3 SV=2)

HSP 1 Score: 214.157 bits (544), Expect = 6.306e-55
Identity = 117/228 (51.32%), Postives = 152/228 (66.67%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            ++ F+FTSESV EGHPDK+CDQISDAVLDA LEQDP+S+VACET   TN+V++ GEIT+K KVD ++I R+  R IG+    +G DAD   V  ++  QSPDI+QGV    G F ++    GAGDQG MFG+A +ETPE MP+    + +L   L  +R  +   +LRPD K+QVTVEY +      PVR+ TV+ISTQH   VT+ +I   L E  IK VIP   L+
Sbjct:    3 LKDFIFTSESVGEGHPDKVCDQISDAVLDAYLEQDPKSRVACETLVTTNLVVIAGEITSKGKVDAQEIARNVIRDIGYNDITMGFDADFAVVSAHVHAQSPDISQGVTEGEGLFKEQ----GAGDQGLMFGFAINETPELMPMPIYYSHELVKHLAGLRHGNKLKFLRPDAKSQVTVEYKDGK----PVRIDTVVISTQHSPDVTHKQIEEALIEECIKKVIPANLLN 222          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_AZOSB (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain BH72) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.306e-55
Identity = 111/221 (50.23%), Postives = 150/221 (67.87%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            FLFTSESV+EGHPDK+ DQISD VLDA L +DP+++VACET   T +V++ GEITT A  +Y +I +D  R IG+ + D+G D   C VL  I +QS DIAQGV+        D GAGDQG MFGYAT+ETP  MPL    A ++  R  EVRK+    WLRPD K+Q+TV+Y +      PV + TV++STQH+  V++ +I+  + E +IKPV+P++ +
Sbjct:    5 FLFTSESVSEGHPDKVADQISDGVLDAILAEDPKARVACETLVSTGLVVISGEITTSAHPNYREIAQDVVRRIGYDNSDIGFDYKSCAVLAAINRQSSDIAQGVN-EGEGLDLDQGAGDQGLMFGYATNETPSLMPLPIYYAHRIMQRQAEVRKDGRLPWLRPDAKSQLTVKYVDGK----PVAIDTVVVSTQHNPEVSHAQISEAVIEEIIKPVLPKELM 220          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_ANADF (S-adenosylmethionine synthetase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=metK PE=3 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.306e-55
Identity = 117/223 (52.47%), Postives = 151/223 (67.71%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI-GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            +LFTSESV EGHPDK+ DQISDAVLDA L QD + +VACET  KT  VM+ GEITT A+++Y K+ R+  + IG+VS D+G D + C VLV ++QQSPDI QGV         D+ GAGDQG MFGYA DET E MP     A  +  +L + R+     +LRPDGK+QVTVEY    G  V  R+ TV++STQH E+V+N ++ A L+E VI   +P+K +D
Sbjct:    6 YLFTSESVTEGHPDKMADQISDAVLDAVLAQDKKGRVACETLLKTGYVMIAGEITTTARIEYPKLAREVVKRIGYVSGDMGFDGNTCGVLVAVDQQSPDIGQGV---------DVGGAGDQGMMFGYACDETNELMPAPIQYAHAVTRQLAKARRGG-LDFLRPDGKSQVTVEY---RGGKV-ARIDTVVVSTQHSESVSNRKLHAALREEVIAKALPKKLVD 214          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_PROM0 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9301) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.235e-55
Identity = 118/227 (51.98%), Postives = 156/227 (68.72%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGVHGH---FTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHD---ETVTN-DEIAADLKEHVIKPVI 733
            M  F+FTSESV EGHPDK+CDQISDAVLDA L +DPES+VACET   T + ++ GEIT+KAKVDY K+VR+  + IG+      G DA+ C VLV +++QSPDI+QGV+          ++ GAGDQG MFGYA DETPE MPL   LA +L  +L +VR     ++L PDGKTQV+++Y       +PV ++T+LISTQH+   + VTN +EI   +KE + K V+
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLTEDPESRVACETVVNTGLCLLTGEITSKAKVDYIKLVRNVIKEIGYEGYRAGGFDANSCAVLVALDEQSPDISQGVNDADDINDDLEDNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHEEVLNYLLPDGKTQVSIDYEKG----LPVSINTILISTQHNSEIDGVTNEEEIRQRIKEDLWKNVV 223          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LEGPH (S-adenosylmethionine synthetase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.235e-55
Identity = 112/224 (50.00%), Postives = 149/224 (66.52%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            E ++FTSESV+EGHPDK+ DQISDA+LDA L QDP+++VACE   KT MV+V GEITTKA VD E+I R   + IG+ S  +G D + C VL  I +QSPDIAQGV    TK    +GAGDQG MFGYA+ ET  FMP     A +L  +L + RK+    WLRPD K Q+T++Y       +PV V TV+ STQH   + + ++   ++E +IK V+P ++L+
Sbjct:    3 EVYVFTSESVSEGHPDKIADQISDAILDAILAQDPKARVACEVLVKTGMVLVGGEITTKAWVDVEEITRHVIKDIGYNSSQMGFDWESCAVLSAIGKQSPDIAQGVDNQQTK---ILGAGDQGLMFGYASRETDVFMPAPIAYAHRLMEKLAKARKSGQLPWLRPDAKCQLTLKYEQG----MPVEVDTVVFSTQHSPDIEHKDLVEAIREEIIKSVLPAEWLN 219          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LEGPC (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Corby) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.235e-55
Identity = 112/224 (50.00%), Postives = 149/224 (66.52%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            E ++FTSESV+EGHPDK+ DQISDA+LDA L QDP+++VACE   KT MV+V GEITTKA VD E+I R   + IG+ S  +G D + C VL  I +QSPDIAQGV    TK    +GAGDQG MFGYA+ ET  FMP     A +L  +L + RK+    WLRPD K Q+T++Y       +PV V TV+ STQH   + + ++   ++E +IK V+P ++L+
Sbjct:    3 EVYVFTSESVSEGHPDKIADQISDAILDAILAQDPKARVACEVLVKTGMVLVGGEITTKAWVDVEEITRHVIKDIGYNSSQMGFDWESCAVLSAIGKQSPDIAQGVDNQQTK---ILGAGDQGLMFGYASRETDVFMPAPIAYAHRLMEKLAKARKSGQLPWLRPDAKCQLTLKYEQG----MPVEVDTVVFSTQHSPDIEHKDLVEAIREEIIKSVLPAEWLN 219          
The following BLAST results are available for this feature:
BLAST of CF832474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_OCEIH6.306e-5550.22S-adenosylmethionine synthetase OS=Oceanobacillus ... [more]
METK_NEIM06.306e-5549.56S-adenosylmethionine synthetase OS=Neisseria menin... [more]
METK_MANSM6.306e-5551.79S-adenosylmethionine synthetase OS=Mannheimia succ... [more]
METK_LEPIN6.306e-5551.32S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_LEPIC6.306e-5551.32S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_AZOSB6.306e-5550.23S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_ANADF6.306e-5552.47S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK_PROM08.235e-5551.98S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_LEGPH8.235e-5550.00S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_LEGPC8.235e-5550.00S-adenosylmethionine synthetase OS=Legionella pneu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832474 ID=CF832474; Name=CF832474; organism=Citrus sinensis; type=EST; length=751bp
CTTTGCTATTGCGGTCTGGTCTTAAGTCTGAATCTTAGATCTGCGCCGAA
ACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTCACCTCT
GAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGATCTCTGA
TGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGGTTGCCT
GTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACC
ACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTGCCGTTC
CATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCGATCACTGCAAAG
TCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCCCAGGGTGTTCAT
GGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCA
TATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCC
ATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAAT
AGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGA
GTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCC
TCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCT
GACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGA
T
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