CF832474

Overview
NameCF832474
Unique NameCF832474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LEGPA (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Paris) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.235e-55
Identity = 112/224 (50.00%), Postives = 149/224 (66.52%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            E ++FTSESV+EGHPDK+ DQISDA+LDA L QDP+++VACE   KT MV+V GEITTKA VD E+I R   + IG+ S  +G D + C VL  I +QSPDIAQGV    TK    +GAGDQG MFGYA+ ET  FMP     A +L  +L + RK+    WLRPD K Q+T++Y       +PV V TV+ STQH   + + ++   ++E +IK V+P ++L+
Sbjct:    3 EVYVFTSESVSEGHPDKIADQISDAILDAILAQDPKARVACEVLVKTGMVLVGGEITTKAWVDVEEITRHVIKDIGYNSSQMGFDWESCAVLSAIGKQSPDIAQGVDNQQTK---ILGAGDQGLMFGYASRETDVFMPAPIAYAHRLMEKLAKARKSGQLPWLRPDAKCQLTLKYEQG----MPVEVDTVVFSTQHSPDIEHKDLVEAIREEIIKSVLPAEWLN 219          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LACLS (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.235e-55
Identity = 120/233 (51.50%), Postives = 152/233 (65.24%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP + VACET   T  V VFGEI+T A VD   +VR+T + IG+   + G D     V V++ +QS DIAQGV         +G      + IGAGDQG MFG+AT+ET E+MPL+  L+ KL  +L ++RK+   S+LRPD K+QVTVEY N+  A    RV TV+ISTQH    TN+EI  D+   VIK +IP + LD
Sbjct:    3 EKHLFTSESVSEGHPDKVADQISDAILDAILAQDPHAHVACETVVYTGTVNVFGEISTSAYVDIAHVVRETIKKIGYTDSENGFDYKSVGVHVSLVEQSSDIAQGVNEAEEVRDKNGQLVDPLDLIGAGDQGMMFGFATNETAEYMPLAISLSHKLVKKLADLRKSGEISYLRPDAKSQVTVEYDNNGKAK---RVDTVVISTQHAAAATNEEIHDDVINKVIKAIIPAELLD 232          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_BUCAT (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.235e-55
Identity = 113/224 (50.45%), Postives = 150/224 (66.96%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M  +LFTSESV+EGHPDK+ DQISDA+LD  L+QD +++VACET  KT MV++ GEITT A VD E+I R T   IG+V+ D G DA+ C VL  I +QSPDI QG++      P   GAGDQG +FGYAT+ET  FMP     A  L  + +E+RK +   WLRPD K+QVT +Y N N     + + TV++STQH E +T   +   + + +IKPV+P+K+L
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEILKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRKTINDIGYVNSDAGFDANSCAVLSAIGKQSPDINQGINRF---DPLKQGAGDQGIIFGYATNETEFFMPAPITYAHLLMQKQSELRKKNILPWLRPDAKSQVTFKYNNGN----IIAIDTVVLSTQHQENITQKYLKEAVMDEIIKPVLPDKWL 217          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_BUCAI (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.235e-55
Identity = 113/224 (50.45%), Postives = 150/224 (66.96%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M  +LFTSESV+EGHPDK+ DQISDA+LD  L+QD +++VACET  KT MV++ GEITT A VD E+I R T   IG+V+ D G DA+ C VL  I +QSPDI QG++      P   GAGDQG +FGYAT+ET  FMP     A  L  + +E+RK +   WLRPD K+QVT +Y N N     + + TV++STQH E +T   +   + + +IKPV+P+K+L
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEILKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRKTINDIGYVNSDAGFDANSCAVLSAIGKQSPDINQGINRF---DPLKQGAGDQGIIFGYATNETEFFMPAPITYAHLLMQKQSELRKKNILPWLRPDAKSQVTFKYNNGN----IIAIDTVVLSTQHQENITQKYLKEAVMDEIIKPVLPDKWL 217          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_BUCA5 (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain 5A) GN=metK PE=3 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.235e-55
Identity = 113/224 (50.45%), Postives = 150/224 (66.96%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M  +LFTSESV+EGHPDK+ DQISDA+LD  L+QD +++VACET  KT MV++ GEITT A VD E+I R T   IG+V+ D G DA+ C VL  I +QSPDI QG++      P   GAGDQG +FGYAT+ET  FMP     A  L  + +E+RK +   WLRPD K+QVT +Y N N     + + TV++STQH E +T   +   + + +IKPV+P+K+L
Sbjct:    1 MTEYLFTSESVSEGHPDKIADQISDALLDEILKQDLKARVACETYVKTGMVLIGGEITTTAWVDVEEITRKTINDIGYVNSDAGFDANSCAVLSAIGKQSPDINQGINRF---DPLKQGAGDQGIIFGYATNETEFFMPAPITYAHLLMQKQSELRKKNILPWLRPDAKSQVTFKYNNGN----IIAIDTVVLSTQHQENITQKYLKEAVMDEIIKPVLPDKWL 217          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_STAES (S-adenosylmethionine synthetase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=metK PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.076e-54
Identity = 114/228 (50.00%), Postives = 145/228 (63.60%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            LFTSESV EGHPDK+ DQ+SDA+LD  L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D+    VL  I++QSPDIAQGV      R        E  GAGDQG MFGYATDET  +MPL   L+ +L  RL +VRK+    +LRPDGK QVTVEY  D+    P R+ T+++STQH E V   +I  D+K HVI P + +  LD
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKDIGYTRAKYGYDSQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATDETDTYMPLPIFLSHQLAKRLADVRKDEILDYLRPDGKVQVTVEYGEDD---KPRRIDTIVVSTQHAEDVELAQIEKDIKTHVIYPTVDKALLD 231          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_STAEQ (S-adenosylmethionine synthetase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=metK PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.076e-54
Identity = 114/228 (50.00%), Postives = 145/228 (63.60%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRP-------EDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            LFTSESV EGHPDK+ DQ+SDA+LD  L+ DP ++VACET   T M ++ GEI+T   VD  K+VR+T + IG+     G D+    VL  I++QSPDIAQGV      R        E  GAGDQG MFGYATDET  +MPL   L+ +L  RL +VRK+    +LRPDGK QVTVEY  D+    P R+ T+++STQH E V   +I  D+K HVI P + +  LD
Sbjct:    7 LFTSESVTEGHPDKIADQVSDAILDEILKDDPNARVACETTVTTGMALISGEISTTTYVDIPKVVRETIKDIGYTRAKYGYDSQTMAVLTAIDEQSPDIAQGVDKALEYRNDISEEEIEATGAGDQGLMFGYATDETDTYMPLPIFLSHQLAKRLADVRKDEILDYLRPDGKVQVTVEYGEDD---KPRRIDTIVVSTQHAEDVELAQIEKDIKTHVIYPTVDKALLD 231          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_XANOR (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae GN=metK PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.405e-54
Identity = 114/226 (50.44%), Postives = 149/226 (65.93%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVR--KNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VACET  KT + +V GE+TT A +D E + R     IG+ S DVG D + C VL  I +QSPDI QGV     K PE  GAGDQG MFGYAT+ET  FMP +  L+ +L  +  ++R  KNS  SWLRPD K+QVT+ Y +     V   +  V++STQHD  V   ++   ++E ++KPV+P K+L
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSFMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDG----VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWL 219          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_XANOP (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=metK PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.405e-54
Identity = 114/226 (50.44%), Postives = 149/226 (65.93%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVR--KNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VACET  KT + +V GE+TT A +D E + R     IG+ S DVG D + C VL  I +QSPDI QGV     K PE  GAGDQG MFGYAT+ET  FMP +  L+ +L  +  ++R  KNS  SWLRPD K+QVT+ Y +     V   +  V++STQHD  V   ++   ++E ++KPV+P K+L
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSFMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDG----VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWL 219          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_XANOM (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=metK PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.405e-54
Identity = 114/226 (50.44%), Postives = 149/226 (65.93%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVR--KNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VACET  KT + +V GE+TT A +D E + R     IG+ S DVG D + C VL  I +QSPDI QGV     K PE  GAGDQG MFGYAT+ET  FMP +  L+ +L  +  ++R  KNS  SWLRPD K+QVT+ Y +     V   +  V++STQHD  V   ++   ++E ++KPV+P K+L
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSFMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDG----VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWL 219          
The following BLAST results are available for this feature:
BLAST of CF832474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LEGPA8.235e-5550.00S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_LACLS8.235e-5551.50S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_BUCAT8.235e-5550.45S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCAI8.235e-5550.45S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_BUCA58.235e-5550.45S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_STAES1.076e-5450.00S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAEQ1.076e-5450.00S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_XANOR1.405e-5450.44S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]
METK_XANOP1.405e-5450.44S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]
METK_XANOM1.405e-5450.44S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832474 ID=CF832474; Name=CF832474; organism=Citrus sinensis; type=EST; length=751bp
CTTTGCTATTGCGGTCTGGTCTTAAGTCTGAATCTTAGATCTGCGCCGAA
ACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTCACCTCT
GAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGATCTCTGA
TGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGGTTGCCT
GTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACC
ACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTGCCGTTC
CATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCGATCACTGCAAAG
TCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCCCAGGGTGTTCAT
GGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCA
TATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCC
ATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAAT
AGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGA
GTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCC
TCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCT
GACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGA
T
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