CF832474

Overview
NameCF832474
Unique NameCF832474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_ACIAD (S-adenosylmethionine synthetase OS=Acinetobacter sp. (strain ADP1) GN=metK PE=3 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.396e-54
Identity = 110/221 (49.77%), Postives = 147/221 (66.52%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEK 742
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A VD+E IVR T   IG+   D+G D   C ++  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N     +PVR+  V++STQHD  ++  ++   + E ++KPVIP +
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANVDFEAIVRQTVNGIGYHHSDLGFDGSTCAIINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENG----MPVRLDAVVLSTQHDPEISQAQLKEAVIEEIVKPVIPSE 216          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_XANCB (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. campestris (strain B100) GN=metK PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.129e-54
Identity = 113/226 (50.00%), Postives = 149/226 (65.93%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVR--KNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VACET  KT + +V GE+TT A +D E + R     IG+ S DVG D + C VL  I +QSPDI QGV     K PE  GAGDQG MFGYAT+ET  +MP +  L+ +L  +  ++R  KNS  SWLRPD K+QVT+ Y +     V   +  V++STQHD  V   ++   ++E ++KPV+P K+L
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSYMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDG----VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWL 219          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_XANC8 (S-adenosylmethionine synthetase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=metK PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.129e-54
Identity = 113/226 (50.00%), Postives = 149/226 (65.93%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVR--KNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VACET  KT + +V GE+TT A +D E + R     IG+ S DVG D + C VL  I +QSPDI QGV     K PE  GAGDQG MFGYAT+ET  +MP +  L+ +L  +  ++R  KNS  SWLRPD K+QVT+ Y +     V   +  V++STQHD  V   ++   ++E ++KPV+P K+L
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVD---RKNPEQQGAGDQGLMFGYATNETDSYMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDG----VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWL 219          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_THET8 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=metK PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.129e-54
Identity = 117/227 (51.54%), Postives = 144/227 (63.44%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR------PED-IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            L TSESV EGHPDKL D+ISDA+LDA + QD +++VA ET   T +V V GEITT+  VD   +VR T R +G+     G DAD C VL  I++QSPDIA GV+  +  R      P D +GAGDQG MFGYATDETPE MPL   LA +L  RL EVRK     +LRPDGK QVTV Y  D     P+ V TV++S QH   V  +++  DL   V++  IP +YL
Sbjct:    6 LVTSESVTEGHPDKLADRISDAILDALIAQDKKARVAAETLVTTGLVFVAGEITTEGYVDIPNLVRKTVREVGYTRAKYGFDADTCAVLTAIDEQSPDIAGGVNLSYEWRVLKSTDPLDRVGAGDQGLMFGYATDETPELMPLPITLAHRLTMRLAEVRKTGLLPYLRPDGKAQVTVVYEGDK----PLYVKTVVVSAQHSPEVEQEQLREDLIREVVRQAIPPEYL 228          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_THET2 (S-adenosylmethionine synthetase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=metK PE=3 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 3.129e-54
Identity = 117/227 (51.54%), Postives = 144/227 (63.44%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR------PED-IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            L TSESV EGHPDKL D+ISDA+LDA + QD +++VA ET   T +V V GEITT+  VD   +VR T R +G+     G DAD C VL  I++QSPDIA GV+  +  R      P D +GAGDQG MFGYATDETPE MPL   LA +L  RL EVRK     +LRPDGK QVTV Y  D     P+ V TV++S QH   V  +++  DL   V++  IP +YL
Sbjct:    6 LVTSESVTEGHPDKLADRISDAILDALIAQDKKARVAAETLVTTGLVFVAGEITTEGYVDIPNLVRKTVREVGYTRAKYGFDADTCAVLTAIDEQSPDIAGGVNLSYEWRVLKSTDPLDRVGAGDQGLMFGYATDETPELMPLPITLAHRLTMRLAEVRKTGLLPYLRPDGKAQVTVVYEGDK----PLYVKTVVVSAQHSPEVEQEQLREDLIREVVRQAIPPEYL 228          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_THEFY (S-adenosylmethionine synthetase OS=Thermobifida fusca (strain YX) GN=metK PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.129e-54
Identity = 119/233 (51.07%), Postives = 146/233 (62.66%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI-------GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKPVIPEKYLD 751
            M   LFTSESV EGHPDK+ DQISDA+LD+ L  DP S+VA ET   T +V V GE+TT   VD   I+R+    IG+ S   G D   C V V+I  QSPDIAQGV   +  R E+I       GAGDQG MFGYA +ETPE MPL   LA  L  RL EVR++ T  +LRPDGKTQVTVEY  +     PVR+ TV++S+QH   +   E +  D+KEHV+ PV+    L+
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDAILDSMLRDDPHSRVAVETLITTGLVHVAGEVTTSTYVDIPTIIREKILEIGYDSSAKGFDGASCGVSVSIGGQSPDIAQGVDNAYEAREEEIFDDLDRQGAGDQGLMFGYANNETPELMPLPITLAHALSQRLAEVRRDGTIPYLRPDGKTQVTVEYDGNR----PVRLDTVVVSSQHAPDIDLRELLTPDIKEHVVDPVVARYNLE 229          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_ALHEH (S-adenosylmethionine synthetase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=metK PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.129e-54
Identity = 108/224 (48.21%), Postives = 148/224 (66.07%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M  +LFTSESV+EGHPDK+ DQISDAVLDA L +DP  ++ACET  KT ++++ GE+TT A +DYE + R+T + IG+   ++G D + C V+  + +QS DIAQGV       PE+ GAGDQG MFGYA++ET   MP     A +L  R  EVR N    WLRPD K+QVT+ Y +      PV V TV++STQH   +T  ++   + E +IKPV+PE+++
Sbjct:    1 MSEYLFTSESVSEGHPDKMADQISDAVLDAILAEDPRGRIACETMIKTGIIILGGEVTTSANIDYEAVARETVKRIGYKHHEMGFDGETCGVINILGKQSVDIAQGVD---RDHPEEQGAGDQGLMFGYASNETDVLMPAPITYAHRLVQRQAEVRCNGQLPWLRPDAKSQVTLRYVDGR----PVAVDTVVLSTQHAPDLTQAQVHEAVIEEIIKPVLPEQWI 217          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_THICR (S-adenosylmethionine synthetase OS=Thiomicrospira crunogena (strain XCL-2) GN=metK PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.087e-54
Identity = 112/224 (50.00%), Postives = 148/224 (66.07%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M T +FTSESV+EGHPDK+ DQISDA+LDA ++QDP+++VACET  KT MVM+ GEITT A VD E++VR     IG+   D+G D + C VL +I +QSP+IAQGV  +      + GAGDQG MFGYA++ET   MP     A +L  +  E+RK     WLRPD K+QVT+ Y +      PV V  V++STQH   V N ++   + E +IKPV+PE +L
Sbjct:    1 MTTTVFTSESVSEGHPDKIADQISDAMLDAIMKQDPKARVACETFVKTGMVMLGGEITTSAWVDQEELVRQVVNDIGYNHGDLGFDGETCAVLSSIGKQSPEIAQGVDEY---EDHEQGAGDQGLMFGYASNETDVLMPAPIYFAHRLMEKQAELRKAGKLDWLRPDAKSQVTLRYEDGQ----PVAVDAVVLSTQHSPEVDNKDLHEAVMEEIIKPVLPEGWL 217          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_LACLA (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. lactis GN=metK PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.087e-54
Identity = 120/233 (51.50%), Postives = 153/233 (65.67%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV---------HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLD 751
            E  LFTSESV+EGHPDK+ DQISDA+LDA L QDP + VACET   T  V VFGEI+T A VD   +VR+T + IG+   + G D     V V++ +QS DIAQGV         +G      + IGAGDQG MFG+AT+ET E+MPL+  L+ KL  +L ++RK+   S+LRPD K+QVTVE Y+DNG     R+ TV+ISTQH  +  N+EI  D+   VIK VIP + LD
Sbjct:    3 EKHLFTSESVSEGHPDKVADQISDAILDAILAQDPHAHVACETVVYTGTVNVFGEISTSAYVDIAHVVRETIKKIGYTDSENGFDYKSVGVHVSLVEQSSDIAQGVNEAEEVRDKNGQLVDPLDLIGAGDQGMMFGFATNETAEYMPLAISLSHKLVKKLADLRKSGEISYLRPDAKSQVTVE-YDDNGK--AKRIDTVVISTQHAASARNEEIHDDVINKVIKAVIPAELLD 232          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_ACIBY (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain AYE) GN=metK PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.087e-54
Identity = 110/219 (50.23%), Postives = 144/219 (65.75%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 736
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++   + E +IKP+IP
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIP 214          
The following BLAST results are available for this feature:
BLAST of CF832474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACIAD2.396e-5449.77S-adenosylmethionine synthetase OS=Acinetobacter s... [more]
METK_XANCB3.129e-5450.00S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_XANC83.129e-5450.00S-adenosylmethionine synthetase OS=Xanthomonas cam... [more]
METK_THET83.129e-5451.54S-adenosylmethionine synthetase OS=Thermus thermop... [more]
METK_THET23.129e-5451.54S-adenosylmethionine synthetase OS=Thermus thermop... [more]
METK_THEFY3.129e-5451.07S-adenosylmethionine synthetase OS=Thermobifida fu... [more]
METK_ALHEH3.129e-5448.21S-adenosylmethionine synthetase OS=Alkalilimnicola... [more]
METK_THICR4.087e-5450.00S-adenosylmethionine synthetase OS=Thiomicrospira ... [more]
METK_LACLA4.087e-5451.50S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_ACIBY4.087e-5450.23S-adenosylmethionine synthetase OS=Acinetobacter b... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832474 ID=CF832474; Name=CF832474; organism=Citrus sinensis; type=EST; length=751bp
CTTTGCTATTGCGGTCTGGTCTTAAGTCTGAATCTTAGATCTGCGCCGAA
ACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTCACCTCT
GAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGATCTCTGA
TGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGGTTGCCT
GTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACC
ACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTGCCGTTC
CATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCGATCACTGCAAAG
TCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCCCAGGGTGTTCAT
GGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCA
TATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCC
ATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAAT
AGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGA
GTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCC
TCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCT
GACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGA
T
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