CF832474

Overview
NameCF832474
Unique NameCF832474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_ACIBT (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=metK PE=3 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 4.087e-54
Identity = 110/219 (50.23%), Postives = 144/219 (65.75%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 736
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++   + E +IKP+IP
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIP 214          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_ACIBS (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain SDF) GN=metK PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.087e-54
Identity = 110/219 (50.23%), Postives = 144/219 (65.75%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 736
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++   + E +IKP+IP
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIP 214          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_ACIBC (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ACICU) GN=metK PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.087e-54
Identity = 110/219 (50.23%), Postives = 144/219 (65.75%), Query Frame = 2
Query:   80 ETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 736
            E  +FTSESV+EGHPDK+ DQISDA+LDA L++DP ++VACET  KT  V++ GEITT A +D E +VR T   IG+   D+G D   C V+  I +QSP+IAQGV     ++PED GAGDQG MFGYA+ ET   MP     A +L  R  E+R++    WLRPD K+QVT  Y N      PVR+  V++STQHD  +T  ++   + E +IKP+IP
Sbjct:    3 EYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVD---RQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGK----PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIP 214          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_STRMK (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain K279a) GN=metK PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.338e-54
Identity = 114/226 (50.44%), Postives = 150/226 (66.37%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVR--KNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VACET  KT + +V GEITT A +D E + R     IG+ S DVG D   C VL  I +QSP IAQGV     K+PE++GAGDQG MFGYAT+ET  +MP +  L+ +L  +  ++R  KNS  SWLRPD K+QVT+ Y N     V   +  V++STQH   +   ++   ++E +IKPV+P K+L
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILTQDQRARVACETMVKTGVAIVAGEITTSAWIDLEALTRKVITDIGYDSSDVGFDGATCGVLNLIGKQSPHIAQGVD---RKKPEEMGAGDQGLMFGYATNETDSYMPAAIHLSHRLVEQQAKIRKKKNSPLSWLRPDAKSQVTLRYENG----VVSAIDAVVLSTQHAPGIKQKDLIEAVREEIIKPVLPAKWL 219          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_DESVV (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=metK PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.338e-54
Identity = 112/223 (50.22%), Postives = 146/223 (65.47%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI-PEKYLD 751
            + FTSESV EGHPDK+ DQISDAVLD  L QDP S+VACET   T M ++ GEITT+   D   +VR+T R+IG+ S ++G D   C V+ +I++QS DIAQGV        ED GAGDQG MFG+A DET   MP     A +L  RLTEVRK+ T    RPDGKTQV+ EY +      PVR++ V++STQH ++ +  +I   +K HVI+P++ P  + D
Sbjct:    8 YYFTSESVTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVD---RATNEDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLTEVRKDGTVDIFRPDGKTQVSFEYVDGK----PVRINNVVVSTQHKDSASQADIIDAVKTHVIRPILEPSGFFD 223          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_DESVH (S-adenosylmethionine synthetase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=metK PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.338e-54
Identity = 112/223 (50.22%), Postives = 146/223 (65.47%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI-PEKYLD 751
            + FTSESV EGHPDK+ DQISDAVLD  L QDP S+VACET   T M ++ GEITT+   D   +VR+T R+IG+ S ++G D   C V+ +I++QS DIAQGV        ED GAGDQG MFG+A DET   MP     A +L  RLTEVRK+ T    RPDGKTQV+ EY +      PVR++ V++STQH ++ +  +I   +K HVI+P++ P  + D
Sbjct:    8 YYFTSESVTEGHPDKVADQISDAVLDVLLAQDPNSRVACETLVTTGMAVIAGEITTRGYADLPHVVRETIRNIGYNSSEMGFDWQTCAVISSIDKQSADIAQGVD---RATNEDQGAGDQGMMFGFACDETATLMPAPIYWAHQLSQRLTEVRKDGTVDIFRPDGKTQVSFEYVDGK----PVRINNVVVSTQHKDSASQADIIDAVKTHVIRPILEPSGFFD 223          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_WIGBR (S-adenosylmethionine synthetase OS=Wigglesworthia glossinidia brevipalpis GN=metK PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.972e-54
Identity = 105/224 (46.88%), Postives = 152/224 (67.86%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M  +LFTSESV+EGHPDK+ DQISD +LDA L QD +++VACET  KT MV+V GE+ + AK+D E+++R+T + IG+++ ++G DA+ C +L NI +QS DI +G++      P   GAGDQG +FGYAT+ET  FMP     A KL  R +EVRK +   WLRPD K+Q+T  Y N       V + TV+IS+QH E +   ++   + E +I+P++P+K++
Sbjct:    1 MNQYLFTSESVSEGHPDKIADQISDTILDAILTQDKKARVACETYIKTGMVLVGGEVNSYAKIDIEELIRNTIKDIGYINSNMGFDANSCAILNNISKQSKDIEKGLN---QLDPYMQGAGDQGIIFGYATNETETFMPAPITYANKLMIRQSEVRKKNILPWLRPDAKSQITFIYENKK----IVGIDTVIISSQHSEEINLSDLREGIMEEIIQPILPKKWI 217          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_SYNJB (S-adenosylmethionine synthetase OS=Synechococcus sp. GN=metK PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.105e-54
Identity = 117/231 (50.65%), Postives = 148/231 (64.07%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR--PED----IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPVIPE 739
            +F+SESV EGHPDK+CDQISDA++DA L  DP S+VA E    T +V++ GEIT++A+V++ ++VRD    IG+     G  A+ C VLV  ++QSPDIAQGV+     R   ED    +GAGDQG MFG+A DETPE MPL   LA +L  +L  VRKN T  +LRPDGKTQVTV Y        PV +HT+LISTQH        +E    + I ADL E V+ PV  E
Sbjct:    1 MFSSESVTEGHPDKICDQISDAIVDALLTADPLSRVAAEVVVNTGLVLLTGEITSQAQVNFTRLVRDKVAEIGYTDAKNGFCAESCAVLVAFDEQSPDIAQGVNMALESRGSQEDQFDLVGAGDQGLMFGFACDETPELMPLPISLAHRLSRQLATVRKNGTLPYLRPDGKTQVTVAYEEGR----PVGIHTLLISTQHTPTIGAITEEAAVQERIRADLWEAVVTPVFAE 227          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_STRM5 (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain R551-3) GN=metK PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.105e-54
Identity = 114/226 (50.44%), Postives = 150/226 (66.37%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVR--KNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M ++LFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VACET  KT + +V GEITT A +D E + R     IG+ S DVG D   C VL  I +QSP IAQGV     K+PE++GAGDQG MFGYAT+ET  +MP +  L+ +L  +  ++R  KNS  SWLRPD K+QVT+ Y N     V   +  V++STQH   +   ++   ++E +IKPV+P K+L
Sbjct:    1 MSSYLFTSESVSEGHPDKVADQISDAVLDAILTQDQRARVACETMVKTGVAIVAGEITTSAWIDLEALTRKVIVDIGYDSSDVGFDGATCGVLNLIGKQSPHIAQGVD---RKKPEEMGAGDQGLMFGYATNETDSYMPAAIHLSHRLVEQQAKIRKKKNSPLSWLRPDAKSQVTLRYENG----VVSAIDAVVLSTQHAPGIKQKDLIEAVREEIIKPVLPAKWL 219          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_PROMP (S-adenosylmethionine synthetase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=metK PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.105e-54
Identity = 117/230 (50.87%), Postives = 152/230 (66.09%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI----GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH----DETVTNDEIAADLKEHV-IKPVIP 736
            M  F+FTSESV EGHPDK+CDQISDAVLDA L +DPES+VACET   T + ++ GEIT++AK+DY K+VR   + IG+      G D++ C VLV +++QSPDI+QGV+       ED+    GAGDQG MFGYA DETPE MPL   LA +L  +L +VR      +L PDGKTQV+++Y       VPV ++T+LISTQH    D     +EI   +KE + I  V+P
Sbjct:    1 MSDFIFTSESVTEGHPDKICDQISDAVLDALLSEDPESRVACETVVNTGLCLLTGEITSRAKLDYIKLVRKVIKEIGYEGSKAGGFDSNSCAVLVALDEQSPDISQGVN-EADDINEDLENNTGAGDQGIMFGYACDETPELMPLPISLAHRLAIQLAKVRHEKVLDYLLPDGKTQVSIDYKKG----VPVSINTILISTQHTAEIDGITNEEEIRQKIKEDLWINVVLP 225          
The following BLAST results are available for this feature:
BLAST of CF832474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACIBT4.087e-5450.23S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBS4.087e-5450.23S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBC4.087e-5450.23S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_STRMK5.338e-5450.44S-adenosylmethionine synthetase OS=Stenotrophomona... [more]
METK_DESVV5.338e-5450.22S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_DESVH5.338e-5450.22S-adenosylmethionine synthetase OS=Desulfovibrio v... [more]
METK_WIGBR6.972e-5446.88S-adenosylmethionine synthetase OS=Wigglesworthia ... [more]
METK_SYNJB9.105e-5450.65S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_STRM59.105e-5450.44S-adenosylmethionine synthetase OS=Stenotrophomona... [more]
METK_PROMP9.105e-5450.87S-adenosylmethionine synthetase OS=Prochlorococcus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832474 ID=CF832474; Name=CF832474; organism=Citrus sinensis; type=EST; length=751bp
CTTTGCTATTGCGGTCTGGTCTTAAGTCTGAATCTTAGATCTGCGCCGAA
ACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTCACCTCT
GAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGATCTCTGA
TGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGGTTGCCT
GTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACC
ACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTGCCGTTC
CATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCGATCACTGCAAAG
TCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCCCAGGGTGTTCAT
GGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCA
TATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCC
ATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAAT
AGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGA
GTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCC
TCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCT
GACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGA
T
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