CF832474

Overview
NameCF832474
Unique NameCF832474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_STRCO (S-adenosylmethionine synthetase OS=Streptomyces coelicolor GN=metK PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.902e-53
Identity = 117/225 (52.00%), Postives = 142/225 (63.11%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKP 727
            M   LFTSESV EGHPDK+ DQISD +LDA L +DP S+VA ET   T +V V GE+TTKA  D   +VR     IG+ S   G D   C V V+I  QSPDIAQGV   +  R E         GAGDQG MFGYA+DETP  MPL   LA +L  RL+EVRKN T  +LRPDGKTQVT+EY  D      VR+ TV++S+QH   +  +  +A D+KE V++P
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDTILDALLREDPTSRVAVETLITTGLVHVAGEVTTKAYADIANLVRGKILEIGYDSSKKGFDGASCGVSVSIGAQSPDIAQGVDTAYENRVEGDEDELDRQGAGDQGLMFGYASDETPTLMPLPVFLAHRLSKRLSEVRKNGTIPYLRPDGKTQVTIEYDGDKA----VRLDTVVVSSQHASDIDLESLLAPDIKEFVVEP 221          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_RALSO (S-adenosylmethionine synthetase OS=Ralstonia solanacearum GN=metK PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.902e-53
Identity = 112/224 (50.00%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            FLFTSESV+EGHPDK+ DQISDA+LDA L QD  ++VA ET   T +V++ GEITT A VDY  + R+T + IG+ + D G+D   C VLV  ++QSPDIAQGV     +  +D    GAGDQG MFGYA DETPE MP     A +L  R +++R++    WLRPD K+QVTV Y N      P  V TV++STQH   ++ ++I   + E +IKPV+P   L
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAILAQDKYARVAAETLCNTGLVVLAGEITTSANVDYIHVARETIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGV----DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYAHRLVERQSQLRRDGRLPWLRPDAKSQVTVRYVNGK----PHSVDTVVLSTQHAPEISQEQIREAVIEEIIKPVLPSHML 220          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_RALEH (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metK PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.902e-53
Identity = 115/224 (51.34%), Postives = 146/224 (65.18%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            FLFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VA ET   T +V++ GEITT A VDY +I RDT + IG+ + D G+D   C VLV  ++QSPDIAQGV     +  +D    GAGDQG MFGYA DETPE MP     A +L  R + +R++    WLRPD K+QVTV Y +      P  V TV++STQH   +T  +I   + E +IKPV+P + L
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAVLDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGV----DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYAHRLVERQSLLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSVDTVVLSTQHSPDITQAQIREAVIEEIIKPVLPAEML 220          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_HAEIG (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain PittGG) GN=metK PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.902e-53
Identity = 113/224 (50.45%), Postives = 147/224 (65.62%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M ++LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   ++G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET   MP +   A +L  +  EVRK+   +WLRPD K+QVT++ Y DN     V V  V++STQH E V+  ++   + E +IKPV+P ++L
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRKVICDIGYEHSEMGFDGHSCAVLNAIGKQSADINQGVD---RENPLDQGAGDQGIMFGYATNETDVLMPAAITYAHRLMEKQAEVRKSGKLAWLRPDAKSQVTLK-YEDNKI---VGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPSEWL 217          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_ANAVT (S-adenosylmethionine synthetase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=metK PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.902e-53
Identity = 116/230 (50.43%), Postives = 142/230 (61.74%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKPV 730
            +LFTSESV EGHPDK+CDQISD +LD  L QDP S+VA E    T +V++ GEITTKA V+Y  I R     IG+ + D G  A    V+V +++QSPDIAQGV+     R +D       IGAGDQG MFG+A +ETPE MPL   LA ++  RL  VRK    S+LRPDGKTQVTV Y +      PV + TVLISTQH        DE     +I  DL   V++PV
Sbjct:    5 YLFTSESVTEGHPDKICDQISDTILDTLLTQDPTSRVAAEVVVNTGLVLITGEITTKANVNYANIARQKIAEIGYTNADNGFSASSTSVIVALDEQSPDIAQGVNTAQETREQDSEELFDKIGAGDQGIMFGFACNETPELMPLPICLAHRIARRLAAVRKTGELSYLRPDGKTQVTVVYEDGR----PVGIDTVLISTQHTATIGDITDEAAVQAKIKQDLWTAVVEPV 230          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_PROM4 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain MIT 9211) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.708e-53
Identity = 108/220 (49.09%), Postives = 144/220 (65.45%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDV-GLDADHCKVLVNIEQQSPDIAQGV---HGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIK 724
            M  F+FTSESV EGHPDK+CDQISDAVLDA L QDP S+VACE    T + ++ GE+T+ A+VD+  +VR   + IG+      G DA+ C VLV +++QSPDIA+GV     H     + IGAGDQG MFGYA +ETPE MPL   LA +L  +L ++R   T  +L PDGKTQV+V Y N+     P+ + T++ISTQH   + +    AD++E + K
Sbjct:    1 MSQFVFTSESVTEGHPDKICDQISDAVLDALLTQDPHSRVACEAVVNTGLCLITGEVTSTAEVDFINLVRSVIKEIGYKDAQAGGFDANSCAVLVALDKQSPDIAKGVDTAEDHTDDPFDKIGAGDQGIMFGYACNETPELMPLPISLAHRLARQLAKIRHQGTLKYLLPDGKTQVSVIYENNE----PIAIDTIVISTQHTSEIDDLSSEADIRERITK 216          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_POLSJ (S-adenosylmethionine synthetase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.708e-53
Identity = 114/227 (50.22%), Postives = 153/227 (67.40%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--DETVTNDEIAAD----LKEHVIKPVIPEKYL 748
            FLFTSESV+EGHPDK+ DQISDA+LDA  +QDP S+VA ET T T +V++ GEITT A VDY ++ RDT + IG+ + + G+D   C VLV  ++QS DIAQGV  H +    +IGAGDQG MFGYA DETPE MP     A +L  R  ++RK+    +LRPD K+QVT+ Y N      P  + TV++STQH  D++ T  ++ A     + E +IKPV+P+++L
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFKQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV-DHASDDHLNIGAGDQGLMFGYACDETPELMPAPIYYAHRLMERQAQLRKDGRLPFLRPDAKSQVTMRYVNGK----PHSIDTVVLSTQHSPDQSETPHKMKASFTEAIIEEIIKPVLPKEWL 226          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_NITOC (S-adenosylmethionine synthetase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.708e-53
Identity = 108/215 (50.23%), Postives = 142/215 (66.05%), Query Frame = 2
Query:   92 FTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 736
            FTSESV+EGHPDK+ DQISD +LDA L QD  ++VACET  KT MV+V GEITT+A +DYE+I+R+T   IG+   ++G D   C V+  I +QS DIAQGV     +  ED GAGDQG MFGYA+DET   MP     A +L  R  E+R+N    WLRPD K+QVT+ Y +D    VPV +  +++STQH   ++   +   + E +IKPV+P
Sbjct:    7 FTSESVSEGHPDKVADQISDVILDAILAQDRRARVACETLVKTGMVLVAGEITTQAHIDYEQIIRETITEIGYNHSEIGFDGATCAVVNAIGKQSSDIAQGVD---RELEEDQGAGDQGMMFGYASDETDVLMPAPITYAHRLVQRQAEIRRNGELPWLRPDAKSQVTLLYEDD----VPVAIDAIVLSTQHSPEISQATLREAVIETIIKPVLP 214          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_HAEIE (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain PittEE) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.708e-53
Identity = 113/224 (50.45%), Postives = 147/224 (65.62%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M ++LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   ++G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET   MP +   A +L  +  EVRK+   +WLRPD K+QVT++ Y DN     V V  V++STQH E V+  ++   + E +IKPV+P ++L
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRKVICDIGYEHSEMGFDGHSCAVLNAIGKQSADINQGVD---RENPLDQGAGDQGIMFGYATNETDVLMPAAITYAHRLMEKQAEVRKSGKLAWLRPDAKSQVTLK-YEDNKI---VGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPTEWL 217          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_HAEI8 (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain 86-028NP) GN=metK PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 7.708e-53
Identity = 113/224 (50.45%), Postives = 147/224 (65.62%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M ++LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   ++G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET   MP +   A +L  +  EVRK+   +WLRPD K+QVT++ Y DN     V V  V++STQH E V+  ++   + E +IKPV+P ++L
Sbjct:    1 MSSYLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRKVICDIGYEHSEMGFDGHSCAVLNAIGKQSADINQGVD---RENPLDQGAGDQGIMFGYATNETDVLMPAAITYAHRLMEKQAEVRKSGKLAWLRPDAKSQVTLK-YEDNKI---VGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPTEWL 217          
The following BLAST results are available for this feature:
BLAST of CF832474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRCO5.902e-5352.00S-adenosylmethionine synthetase OS=Streptomyces co... [more]
METK_RALSO5.902e-5350.00S-adenosylmethionine synthetase OS=Ralstonia solan... [more]
METK_RALEH5.902e-5351.34S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_HAEIG5.902e-5350.45S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_ANAVT5.902e-5350.43S-adenosylmethionine synthetase OS=Anabaena variab... [more]
METK_PROM47.708e-5349.09S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_POLSJ7.708e-5350.22S-adenosylmethionine synthetase OS=Polaromonas sp.... [more]
METK_NITOC7.708e-5350.23S-adenosylmethionine synthetase OS=Nitrosococcus o... [more]
METK_HAEIE7.708e-5350.45S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_HAEI87.708e-5350.45S-adenosylmethionine synthetase OS=Haemophilus inf... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832474 ID=CF832474; Name=CF832474; organism=Citrus sinensis; type=EST; length=751bp
CTTTGCTATTGCGGTCTGGTCTTAAGTCTGAATCTTAGATCTGCGCCGAA
ACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTCACCTCT
GAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGATCTCTGA
TGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGGTTGCCT
GTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACC
ACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTGCCGTTC
CATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCGATCACTGCAAAG
TCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCCCAGGGTGTTCAT
GGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCA
TATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCC
ATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAAT
AGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGA
GTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCC
TCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCT
GACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGA
T
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