CF832474

Overview
NameCF832474
Unique NameCF832474
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:172..922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.315e-52
Identity = 112/221 (50.68%), Postives = 142/221 (64.25%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE 739
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DETP+ MP     A +L  R +E+RK+    WLRPD K+QVT  Y +      P  V TV++STQH   ++   I   + E +IKP  PE
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPE 218          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.315e-52
Identity = 112/221 (50.68%), Postives = 142/221 (64.25%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE 739
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DETP+ MP     A +L  R +E+RK+    WLRPD K+QVT  Y +      P  V TV++STQH   ++   I   + E +IKP  PE
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPE 218          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_BORBR (S-adenosylmethionine synthetase OS=Bordetella bronchiseptica GN=metK PE=3 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.315e-52
Identity = 112/221 (50.68%), Postives = 142/221 (64.25%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE 739
            FLFTSESV+EGHPDK+ DQISDA+LDA   QDP ++VA ET   T +V++ GEITT A VDY ++ RDT R IG+ + + G+D   C VLV  ++QSPDIAQGV     +  ED    GAGDQG MFGYA DETP+ MP     A +L  R +E+RK+    WLRPD K+QVT  Y +      P  V TV++STQH   ++   I   + E +IKP  PE
Sbjct:    6 FLFTSESVSEGHPDKVADQISDAILDAIFTQDPNARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIRHIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRSSEDYLNQGAGDQGLMFGYACDETPDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPE 218          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_BAUCH (S-adenosylmethionine synthetase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=metK PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.315e-52
Identity = 114/224 (50.89%), Postives = 147/224 (65.62%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M   LFTSESV+EGHPDK+ DQISD VLDA L QD +++VACET  KT MV+V GEITT A +D E++ R+T R IG+ + ++  DA+ C VL  I +QSPDI +G++      P + GAGDQG MFGYAT+ET   MP     A +L AR + VRKN T  WL PD K+QVT  Y  D G +  V + TV+ STQH E +T   +   + E +IKPV+P + L
Sbjct:    1 MAKHLFTSESVSEGHPDKIADQISDTVLDAILAQDLKARVACETYVKTGMVLVGGEITTNAWIDIEELTRNTIRDIGYTNSEMKFDANSCAVLSIISKQSPDINKGIN---NIDPREQGAGDQGFMFGYATNETDVLMPAPITYAHRLVARQSLVRKNGTLPWLCPDAKSQVTFAY--DEGKV--VGIDTVVFSTQHVENITLPNLKEAVMEEIIKPVLPIELL 217          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_STRST (S-adenosylmethionine synthetase OS=Streptomyces spectabilis GN=metK PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.717e-52
Identity = 116/225 (51.56%), Postives = 143/225 (63.56%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPED-------IGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKP 727
            M   LFTSESV EGHPDK+ DQISD +LDA L +DP S+VA ET   T +V V GE+TTKA     ++VR+    IG+ S   G D   C V V+I  QSPDIAQGV   +  R E         GAGDQG MFGYA DETPE MPL   LA +L  RL+EVRKN T  +LRPDGKTQVT+EY  D      VR+ TV++S+QH   +  +  +A D++E V++P
Sbjct:    1 MSRRLFTSESVTEGHPDKIADQISDTILDALLREDPTSRVAVETLITTGLVHVAGEVTTKAYAPIAQLVREKILEIGYDSSKKGFDGASCGVSVSIGAQSPDIAQGVDTAYESRVEGDEDELDRQGAGDQGLMFGYACDETPELMPLPIHLAHRLSRRLSEVRKNGTIPYLRPDGKTQVTIEYDGDKA----VRLDTVVVSSQHASDIDLESLLAPDIREFVVEP 221          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_RHOOB (S-adenosylmethionine synthetase OS=Rhodococcus opacus (strain B4) GN=metK PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.717e-52
Identity = 119/226 (52.65%), Postives = 142/226 (62.83%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGV-HGHFTKRPE-------DIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKPVIPE 739
            LFTSESV EGHPDK+CD ISD++LDA L  DP ++VA ET   T  V V GE+TT A  D  KIVRDT   IG+ S   G D + C V V I  QSP+IAQGV H H  +  E         GAGDQG MFG+AT +TPE MPL   LA +L  RLTEVRK+    +LRPDGKTQVT+EY  D      VR+ TV+ISTQH   +  D  +  DL+E V+  V+ E
Sbjct:    8 LFTSESVTEGHPDKICDAISDSILDALLTDDPRARVAVETLVTTGQVHVAGEVTTTAYADIPKIVRDTVLEIGYDSSAKGFDGNSCGVNVAIGAQSPEIAQGVDHSHEVRTGELSDDEIDRQGAGDQGLMFGFATTDTPELMPLPIALAHRLSRRLTEVRKSGVLPYLRPDGKTQVTIEYDGDKA----VRLDTVVISTQHAADIDLDNLLTPDLREKVLGSVLAE 229          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_CORA7 (S-adenosylmethionine synthetase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=metK PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.717e-52
Identity = 115/221 (52.04%), Postives = 138/221 (62.44%), Query Frame = 2
Query:   89 LFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKR------PEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVI 733
            LFTSESV EGHPDK+CD ISDA+LDA LE+DP++ VA ET   T  V V GE+ T   V+  +IVR T   IGF S DVG D   C V V I +QS +I  GV      R       +  GAGDQG MFGYAT+ETPEFMPL    A  L  RLT VRK      LRPDGKTQVT  Y  ++   VP R+ T++ISTQHD  VT + +A  L+ HV++ V+
Sbjct:   11 LFTSESVTEGHPDKICDAISDAILDALLEEDPDAHVAVETLVTTGQVHVVGEVRTSGYVEIPQIVRKTLVEIGFTSSDVGFDGHTCGVNVAIGEQSQEIGAGVDASTEVRSGTFEDDDQYGAGDQGLMFGYATNETPEFMPLPISTAHHLSRRLTHVRKEGIVPSLRPDGKTQVTFAYDEND---VPTRLETIVISTQHDPEVTQEWLAEQLRTHVVEWVV 228          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_VARPS (S-adenosylmethionine synthetase OS=Variovorax paradoxus (strain S110) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.243e-52
Identity = 113/227 (49.78%), Postives = 151/227 (66.52%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQH--DETVTNDEIAADLK----EHVIKPVIPEKYL 748
            FLFTSESV+EGHPDK+ DQISDA+LDA  EQDP S+VA ET T T +V++ GEITT A VDY ++ RDT + IG+ + D G+D   C V+V  ++QS DIAQGV  H +    + GAGDQG MFGYA DETPE MP     A +L  R  ++RK+    +LRPD K+QVT+ Y +      P  + TV++STQH  D++ T  ++ A       E +IKPV+P+++L
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAILDAIFEQDPRSRVAAETLTNTGLVVLAGEITTNAHVDYIQVARDTIKRIGYDNTDYGIDYKGCAVMVCYDKQSNDIAQGV-DHASDDHLNTGAGDQGLMFGYACDETPELMPAPIYYAHRLVERQAQLRKDGRLPFLRPDAKSQVTMRYVDGK----PHSIDTVVLSTQHHPDQSETPTKMKASFNEAIIEEIIKPVLPKEWL 226          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_RALEJ (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain JMP134) GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.243e-52
Identity = 112/224 (50.00%), Postives = 147/224 (65.62%), Query Frame = 2
Query:   86 FLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDI---GAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            FLFTSESV+EGHPDK+ DQISDAVLDA L QD  ++VA ET   T +V++ GEITT A VDY ++ RDT + IG+ + + G+D   C VLV  ++QSPDIAQGV     +  +D    GAGDQG MFGYA DETPE MP     + +L  R +++R++    WLRPD K+QVTV Y +      P  V TV++STQH   +T  +I   + E +IKPV+P + L
Sbjct:    5 FLFTSESVSEGHPDKVADQISDAVLDAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQVARDTIKRIGYDNTEYGIDYKGCAVLVAYDKQSPDIAQGV----DRASDDYLNQGAGDQGLMFGYACDETPELMPFPIYYSHRLVERQSQLRRDGRLPWLRPDAKSQVTVRYVDGR----PHSVDTVVLSTQHAPDITQAQIREAVIEEIIKPVLPPEML 220          
BLAST of CF832474 vs. ExPASy Swiss-Prot
Match: METK_PASMU (S-adenosylmethionine synthetase OS=Pasteurella multocida GN=metK PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.243e-52
Identity = 111/224 (49.55%), Postives = 145/224 (64.73%), Query Frame = 2
Query:   77 METFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVDYEKIVRDTCRSIGFVSDDVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEDIGAGDQGHMFGYATDETPEFMPLSHVLATKLGARLTEVRKNSTCSWLRPDGKTQVTVEYYNDNGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYL 748
            M  +LFTSESV+EGHPDK+ DQISDAVLD  L+QDP+++VACET  KT M +V GEITT A VD E + R     IG+   D+G D   C VL  I +QS DI QGV     + P D GAGDQG MFGYAT+ET   MP +   A +L  R  +VRK  T  WLRPD K+QVT++Y +       V V  V++STQH ++++  ++   + E +IKPV+P ++L
Sbjct:    1 MSRYLFTSESVSEGHPDKIADQISDAVLDEILKQDPKARVACETYVKTGMALVGGEITTSAWVDIENLTRQVICDIGYKHSDMGFDGHSCAVLNAIGKQSSDINQGVD---RENPLDQGAGDQGIMFGYATNETEVLMPAAITYAHRLMERQAKVRKEGTLPWLRPDAKSQVTLKYEDHK----IVGVDAVVLSTQHCDSISQHDLHEAVMEEIIKPVLPAEWL 217          
The following BLAST results are available for this feature:
BLAST of CF832474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BORPE1.315e-5250.68S-adenosylmethionine synthetase OS=Bordetella pert... [more]
METK_BORPA1.315e-5250.68S-adenosylmethionine synthetase OS=Bordetella para... [more]
METK_BORBR1.315e-5250.68S-adenosylmethionine synthetase OS=Bordetella bron... [more]
METK_BAUCH1.315e-5250.89S-adenosylmethionine synthetase OS=Baumannia cicad... [more]
METK_STRST1.717e-5251.56S-adenosylmethionine synthetase OS=Streptomyces sp... [more]
METK_RHOOB1.717e-5252.65S-adenosylmethionine synthetase OS=Rhodococcus opa... [more]
METK_CORA71.717e-5252.04S-adenosylmethionine synthetase OS=Corynebacterium... [more]
METK_VARPS2.243e-5249.78S-adenosylmethionine synthetase OS=Variovorax para... [more]
METK_RALEJ2.243e-5250.00S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_PASMU2.243e-5249.55S-adenosylmethionine synthetase OS=Pasteurella mul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01O16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01O16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832474 ID=CF832474; Name=CF832474; organism=Citrus sinensis; type=EST; length=751bp
CTTTGCTATTGCGGTCTGGTCTTAAGTCTGAATCTTAGATCTGCGCCGAA
ACACTTGCCAGCCACAGCTTGATAAGATGGAGACCTTTCTATTCACCTCT
GAATCTGTGAACGAGGGTCACCCCGACAAGTTGTGCGACCAGATCTCTGA
TGCGGTGCTTGATGCCTGCCTTGAGCAGGATCCTGAGAGCAAGGTTGCCT
GTGAGACATGCACCAAGACCAACATGGTCATGGTCTTTGGAGAGATTACC
ACCAAGGCCAAGGTAGACTATGAGAAGATTGTTCGCGACACTTGCCGTTC
CATTGGATTTGTTTCTGATGATGTGGGTCTTGATGCCGATCACTGCAAAG
TCCTGGTCAATATTGAGCAACAAAGCCCTGATATTGCCCAGGGTGTTCAT
GGCCACTTTACAAAGCGCCCTGAGGACATTGGTGCTGGTGACCAGGGCCA
TATGTTTGGTTATGCTACTGATGAGACCCCTGAATTTATGCCTTTGAGCC
ATGTCCTTGCCACCAAACTTGGTGCTCGTCTCACGGAGGTTAGGAAGAAT
AGTACCTGCTCTTGGCTAAGGCCCGATGGGAAGACCCAGGTCACTGTTGA
GTACTACAATGACAATGGTGCCATGGTCCCAGTCCGTGTCCACACGGTCC
TCATTTCAACCCAGCATGATGAGACTGTCACAAATGATGAAATTGCTGCT
GACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGAGAAGTACCTTGA
T
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