CF832478
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832478 vs. ExPASy Swiss-Prot
Match: ACUC_BACSU (Acetoin utilization protein acuC OS=Bacillus subtilis GN=acuC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.680e-13 Identity = 69/263 (26.24%), Postives = 111/263 (42.21%), Query Frame = 2 Query: 23 IYSPDYNISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKS--------LQSSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAK--LAKERGWAINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPGIYPRDYEARRFIDQK-----------VEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTD 748 IYSP Y E HPF+ + L + D IV P AS+E+L +VH++ Y+++ L + S + +F +L VGGT+ AA ++ + A N+GGG HH GFC Y D ++ I Y + + +RV+ ID DAH G+G + F + V L + G Y + I +K + + + T + +L+ A F+P+++I G D Sbjct: 7 IYSPSYQTYMFHQE--HPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVHTDDYIQAVKLAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLL------VGGTLTAADWVMSGQALHAANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYS-ARVLYIDTDAHHGDGVQFTFYDNPDVCTLSIHETGRYL--FPGTGQIQEKGSGKGYGYSFNIPLDAFTEDDSFLEAYRTAASEVAAYFEPDVIISQNGAD 258
BLAST of CF832478 vs. ExPASy Swiss-Prot
Match: HDAC8_BOVIN (Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13 Identity = 67/261 (25.67%), Postives = 108/261 (41.38%), Query Frame = 2 Query: 8 LPLPLIYSPDYNISFLGIEKLHPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ--SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGW---AINVGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDM--FNPGIYPRDYEAR-------RFIDQKVEVVSGTTTNEYLKKLDEALEVAGHTFDPELVIYNAGTD 748 LP IYSP+Y + K+ + + + + + IV+P AS E++ H+++YL+ LQ S + L +C + + + VGG + A G AIN GG+HH DE GFC D L I ++ R++ +DLD H G+G E FS S+V + + F+PG +P + R+ V + Y + L+ F+P+ V+ G D Sbjct: 14 LPPVYIYSPEYVSVCDSLAKV----PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSIEYGLGYDCPATEGI-FDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGI--LRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGAD 267
BLAST of CF832478 vs. ExPASy Swiss-Prot
Match: ACUC_STAXY (Acetoin utilization protein acuC OS=Staphylococcus xylosus GN=acuC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13 Identity = 56/243 (23.05%), Postives = 109/243 (44.86%), Query Frame = 2 Query: 71 HPFDSSKWGRICQFLSSEGFLDKNCIVEPLEASKEDLLVVHSESYLKSLQ-SSPNVSIIIEVPPVALFPNCLVQRKVLYPFRKQVGGTILAAKLAKERGWAIN---VGGGFHHCSADEGGGFCAYADISLCIHYAFVQLNISRVMIIDLDAHQGNGHEKDFSSDSRVYILDMFNPG--IYPRDYEARRFIDQKVEVVSGTTTN----------EYLKKLDEALEVAGHTFDPELVIYNAGTDI 751 HPF+ + + L G L ++ I+ P A+ ++L ++H+ Y+++++ +S + E L +Q ++++ ++ G L G N +GGG HH GFC Y D+++ I Y + N RV+ ID DAH G+G + F ++ + I + G ++P + + ++ E G T N +L + +E +F P++++ G D+ Sbjct: 25 HPFNQMRLKLTTELLMELGQLKQHHIISPRIATDDELSLIHAYDYIQAIRHASHGILSENEAKKYGLDGEDTLQFRMMHKHSARIVGGALNLADQIMSGTLTNGCHLGGGLHHSLPGRANGFCIYNDVAITISYLMQKYN-QRVLCIDTDAHHGDGTQWSFYTNDQALIYSIHETGKFLFP---GSGHYTERGAEKGFGYTVNIPLEPYTEDQSFLDVFKQTIEPVVASFKPDIIVSVHGVDV 263 The following BLAST results are available for this feature:
BLAST of CF832478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832478 ID=CF832478; Name=CF832478; organism=Citrus sinensis; type=EST; length=753bpback to top |