CF832491

Overview
NameCF832491
Unique NameCF832491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_METPP (Adenosylhomocysteinase OS=Methylibium petroleiphilum (strain PM1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.880e-41
Identity = 96/160 (60.00%), Postives = 106/160 (66.25%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNK++I   HM  MK+ AIVCNIGHFDNEIDV  LE    +K   IKPQ D  VFP+    I +LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+  KS      KVYVLPKHLDEKV           LT LT EQA YI VS  GPYK   YRY
Sbjct:  323 GNKNVIRYEHMAAMKDEAIVCNIGHFDNEIDVASLEK---LKWDEIKPQVDHVVFPDGKK-ITLLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELF-TKSADYQVGKVYVLPKHLDEKVARLHLKKVGAMLTELTDEQAAYIGVSKSGPYKADTYRY 477          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_LEPCP (Adenosylhomocysteinase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.880e-41
Identity = 94/160 (58.75%), Postives = 107/160 (66.88%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN+D+I   HM  MK+ AIVCNIGHFDNEIDV  LE Y   +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+     G    KVYVLPKHLDEKV           LT LT +QA YI V  +GPYKP  YRY
Sbjct:  323 GNRDVIRHEHMAAMKDQAIVCNIGHFDNEIDVASLEGYEWDE---IKPQVDHIIFPDGKK-IILLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELFCHPD-GYDVGKVYVLPKHLDEKVARLHLKKVGAMLTELTDDQAAYIGVPKNGPYKPDTYRY 477          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_AGRT5 (Adenosylhomocysteinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.880e-41
Identity = 91/160 (56.88%), Postives = 111/160 (69.38%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKD+I + HM++MK+ AIV NIGHFDNEI V  L     +K   IKPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQV+ Q+EL+ +   G+Y+ +VYVLPKHLDEKV           LT L+  QADYI +S  GP+K  HYRY
Sbjct:  313 GNKDVIRIEHMREMKDMAIVGNIGHFDNEIQVASLRN---LKWTNIKPQVDMIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQVLGQIELFTK--PGEYKNEVYVLPKHLDEKVARLHLEKLGVRLTELSDLQADYIGISKQGPFKAEHYRY 466          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_PROMA (Adenosylhomocysteinase OS=Prochlorococcus marinus GN=ahcY PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.029e-40
Identity = 92/160 (57.50%), Postives = 109/160 (68.12%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   H+ +MK+ AIV NIGHFDNEIDV  L++Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+K+  +  Y+  VYVLPKHLDE V           LT L+KEQADYI+V  +GPYK   YRY
Sbjct:  323 GNFQVICHDHLIRMKDEAIVSNIGHFDNEIDVASLKSYQWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFKKGDS--YQNNVYVLPKHLDEMVARLHLDKIGANLTELSKEQADYINVPIEGPYKSEQYRY 476          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_BURTA (Adenosylhomocysteinase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.344e-40
Identity = 90/160 (56.25%), Postives = 107/160 (66.88%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   HMK M++NAIVCNIGHFD+EIDV     Y       IKPQ D  +FP+    +I+LAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL+     G+Y  KVYVLPKHLDEKV           L+ L+ +QA YI V   GP+KP HYRY
Sbjct:  320 GNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQWEN---IKPQVDHIIFPD-GKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTR--GGEYANKVYVLPKHLDEKVARLHLARIGAQLSELSDDQAAYIGVPKAGPFKPDHYRY 473          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_BORPD (Adenosylhomocysteinase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.755e-40
Identity = 91/160 (56.88%), Postives = 109/160 (68.12%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   HM+ MK+ AIVCNIGHFDNEIDV  L+     +   IKPQ D  VFP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+  ++      +VYVLPKHLDEKV           LT L ++QADYI+V  +GPYKP HYRY
Sbjct:  318 GNYHVITREHMQAMKDQAIVCNIGHFDNEIDVAALDDCQWEE---IKPQVDHVVFPD-GKRIILLAKGRLVNLGCATGHPSFVMSSSFANQTIAQIELY-TRNEAYTRGQVYVLPKHLDEKVARLHLKKLGAKLTSLRQDQADYINVPVEGPYKPDHYRY 472          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_DELAS (Adenosylhomocysteinase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.293e-40
Identity = 96/161 (59.63%), Postives = 106/161 (65.84%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYE-KKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN+DII   HM  MKN AIVCNIGHFDNEIDV  +E Y   +   IKPQ D   FP+    II+LA+GRL+NLGCATGHPSFVMS SF NQ IAQ+EL+ +     YE  KVYVLPK LDEKV           LT LT  QA YI VS  GPYKP  YRY
Sbjct:  322 GNRDIIRHEHMVAMKNEAIVCNIGHFDNEIDVASIEQYQWEE---IKPQVDHITFPDGKK-IILLAKGRLVNLGCATGHPSFVMSASFANQTIAQIELFTKPDA--YEVGKVYVLPKILDEKVARLHLKKVGAMLTELTDGQAAYIGVSKQGPYKPETYRY 476          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_GRABC (Adenosylhomocysteinase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.994e-40
Identity = 87/160 (54.37%), Postives = 107/160 (66.88%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN D+I + HM+ MKN AIVCNIGHFD+EI +  L  Y   +   +KPQ D  VFP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQV+AQ+ELW+ K        VY LPKHLDEKV           LT+L+ +QA+YI VS  GP+K   YRY
Sbjct:  285 GNVDVITIDHMRAMKNRAIVCNIGHFDSEIQIESLRNY---RWENVKPQVDEVVFPD-GKRLIILSEGRLVNLGNATGHPSFVMSASFTNQVLAQIELWQAKPGQYLPNHVYTLPKHLDEKVAALHLAKVGAKLTKLSDKQAEYIGVSQAGPFKHDLYRY 440          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_RHILW (Adenosylhomocysteinase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.911e-40
Identity = 89/160 (55.62%), Postives = 112/160 (70.00%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKD+I + HM++MK+ AIV NIGHFDNEI+V  L     +K   +KPQ D   FP+ N  II+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+ +    +Y  +VY+LPKHLDEKV           LT+L++EQA YI VS  GP+K  HYRY
Sbjct:  313 GNKDVIRIDHMRQMKDMAIVGNIGHFDNEIEVAALRN---LKWTNVKPQVDLIEFPKGNR-IILLSEGRLLNLGNATGHPSFVMSASFTNQTLAQIELFTKPD--QYSNQVYILPKHLDEKVARLHLDKLGVKLTQLSEEQAAYIGVSPKGPFKSDHYRY 466          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_PROM4 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9211) GN=ahcY PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.911e-40
Identity = 91/160 (56.88%), Postives = 108/160 (67.50%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN ++I   H+ +MK+ AIVCNIGHFDNEIDV  L+ Y       IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + S   Y+ +VY+LPKHLDE V           LT LT+EQA YI+V   GPYK   YRY
Sbjct:  323 GNFNVITHDHLIRMKDEAIVCNIGHFDNEIDVASLKPYQWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTQGS--NYDNQVYILPKHLDELVARLHLDKIGANLTELTEEQAAYINVPIKGPYKSEQYRY 476          
The following BLAST results are available for this feature:
BLAST of CF832491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
SAHH_METPP7.880e-4160.00Adenosylhomocysteinase OS=Methylibium petroleiphil... [more]
SAHH_LEPCP7.880e-4158.75Adenosylhomocysteinase OS=Leptothrix cholodnii (st... [more]
SAHH_AGRT57.880e-4156.88Adenosylhomocysteinase OS=Agrobacterium tumefacien... [more]
SAHH_PROMA1.029e-4057.50Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_BURTA1.344e-4056.25Adenosylhomocysteinase OS=Burkholderia thailandens... [more]
SAHH_BORPD1.755e-4056.88Adenosylhomocysteinase OS=Bordetella petrii (strai... [more]
SAHH_DELAS2.293e-4059.63Adenosylhomocysteinase OS=Delftia acidovorans (str... [more]
SAHH_GRABC2.994e-4054.38Adenosylhomocysteinase OS=Granulibacter bethesdens... [more]
SAHH_RHILW3.911e-4055.63Adenosylhomocysteinase OS=Rhizobium leguminosarum ... [more]
SAHH_PROM43.911e-4056.88Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832491 ID=CF832491; Name=CF832491; organism=Citrus sinensis; type=EST; length=824bp
GGGGTGCGGGCCCCACGAGTTTTTTTTTTTTTTTTATAATCATTCATCAG
TAAACAATAAGGATAACCTTATGCAGCAAAGCAAGCAAAACTTAAAACTG
CATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAAA
TCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAAC
TTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCCT
ACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCT
TTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCT
GTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAG
CCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGA
AGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCTT
CTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCA
CCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGCA
CATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTT
GGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCT
TAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAAG
TGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGNC
AACCATGATGATGTCCTTGTTACC
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