CF832491

Overview
NameCF832491
Unique NameCF832491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF832491_ssr319 microsatellite CF832491_ssr319:319..336. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1105..1928. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_CAUCR (Adenosylhomocysteinase OS=Caulobacter crescentus GN=ahcY PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.175e-44
Identity = 96/160 (60.00%), Postives = 111/160 (69.38%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKD+I V  M+KMKNNAIVCNIGHFD+EI + GL  +   K   IKPQ     FP+    +IVL+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+ELW  K+  KYE +VY LPKHLDEKV           LT L K+QADYI V   GP+KP HYRY
Sbjct:  310 GNKDVITVDDMRKMKNNAIVCNIGHFDSEIQIAGLRNF---KWDEIKPQVHHVEFPDGKK-LIVLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELWTNKA--KYENQVYTLPKHLDEKVAFLHLEKLGAKLTTLRKDQADYIGVPEAGPFKPDHYRY 463
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_RALEJ (Adenosylhomocysteinase OS=Ralstonia eutropha (strain JMP134) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.534e-44
Identity = 92/160 (57.50%), Postives = 110/160 (68.75%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   HM +MK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D   FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW+E+ +GKY   VY LPKHLDEKV           LT LT++QA YI V  +GPYK  HYRY
Sbjct:  317 GNYHVITHDHMARMKDQAIVCNIGHFDNEIDIASIEKYEWDE---IKPQVDHVKFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTLPKHLDEKVARLQLRKLNAQLTELTEQQAAYIGVKKEGPYKADHYRY 472
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_CUPTR (Adenosylhomocysteinase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.004e-44
Identity = 92/160 (57.50%), Postives = 109/160 (68.12%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   HM KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D   FP+    +I+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW+E+ +GKY   VY LPKHLDEKV           LT LT +QA YI V  +GPYK  HYRY
Sbjct:  317 GNYHVITHEHMAKMKDQAIVCNIGHFDNEIDIASIEKYEWDE---IKPQVDHVKFPDGKK-LIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWQERDSGKYPVGVYTLPKHLDEKVARLQLRKLNAQLTELTDQQAAYIGVKKEGPYKADHYRY 472
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_BRAJA (Adenosylhomocysteinase OS=Bradyrhizobium japonicum GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.004e-44
Identity = 94/160 (58.75%), Postives = 111/160 (69.38%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDII + HM+ MK+ AIVCNIGHFDNEI + GL     +K   IKPQ D   FP+ +  II+L+EGRL+NLG A GHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV           LT L K+QADYI V  +GPYK  HYRY
Sbjct:  318 GNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAGLRN---LKWTNIKPQVDEIEFPDKHR-IIMLSEGRLVNLGNAMGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKTLDEKVARLHLAKIGVKLTELRKDQADYIGVKQEGPYKSDHYRY 473
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_PROMP (Adenosylhomocysteinase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.617e-44
Identity = 96/160 (60.00%), Postives = 114/160 (71.25%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   ++ KMK+ AIVCNIGHFDNEIDV  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +  + +Y K+VYVLPKHLDE V           LT+LTK+QADYI+VS +GPYKP  YRY
Sbjct:  319 GNYQVITNDNLIKMKDEAIVCNIGHFDNEIDVASLKDYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNK--SDEYSKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKDQADYINVSVEGPYKPEQYRY 472
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_PROM9 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9312) GN=ahcY PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.617e-44
Identity = 97/160 (60.62%), Postives = 113/160 (70.62%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   ++ KMK+ AIVCNIGHFDNEIDV  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    KY K+VYVLPKHLDE V           LT+LT+EQADYI+VS +GPYKP  YRY
Sbjct:  319 GNYQVITNKNLVKMKDEAIVCNIGHFDNEIDVASLKDYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSE--KYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTEEQADYINVSVEGPYKPELYRY 472
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_PROM2 (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9215) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.418e-44
Identity = 97/160 (60.62%), Postives = 112/160 (70.00%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   ++ KMKN AIVCNIGHFDNEIDV  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V           LT+LTKEQADYI+VS +GPYK   YRY
Sbjct:  319 GNYQVITKENLVKMKNEAIVCNIGHFDNEIDVASLKNYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFNKSE--QYAKEVYVLPKHLDEMVARLHLDKIGAKLTKLTKEQADYINVSVEGPYKSELYRY 472
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_COXB1 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuK_Q154) GN=ahcY PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.418e-44
Identity = 94/160 (58.75%), Postives = 114/160 (71.25%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN DII   HM KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    ++VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  285 GNTDIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLMVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS9 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9902) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.830e-44
Identity = 96/160 (60.00%), Postives = 112/160 (70.00%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   H+ KMK+ AIVCNIGHFDNEIDV  L+ Y   K   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  323 GNYQVIRNEHLVKMKDEAIVCNIGHFDNEIDVASLKDY---KWDNIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTK--ANEYGKEVYVLPKHLDEMVARLHLSKIGANLTELSKDQADYINVPVEGPYKPDHYRY 476
[Close]
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_SYNS3 (Adenosylhomocysteinase OS=Synechococcus sp. (strain CC9311) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.830e-44
Identity = 96/160 (60.00%), Postives = 114/160 (71.25%), Query Frame = -1 
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   H+ KMK+ AIVCNIGHFDNEIDV  L++Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + S  +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  323 GNYQVIRNEHLVKMKDEAIVCNIGHFDNEIDVASLKSY---EWDNIKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGS--EYGKEVYVLPKHLDEMVARLHLEKIGCKLTELSKDQADYINVPVEGPYKPDHYRY 476
The following BLAST results are available for this feature:
BLAST of CF832491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
SAHH_CAUCR1.175e-4460.00Adenosylhomocysteinase OS=Caulobacter crescentus G... [more]
SAHH_RALEJ1.534e-4457.50Adenosylhomocysteinase OS=Ralstonia eutropha (stra... [more]
SAHH_CUPTR2.004e-4457.50Adenosylhomocysteinase OS=Cupriavidus taiwanensis ... [more]
SAHH_BRAJA2.004e-4458.75Adenosylhomocysteinase OS=Bradyrhizobium japonicum... [more]
SAHH_PROMP2.617e-4460.00Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PROM92.617e-4460.63Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_PROM23.418e-4460.63Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_COXB13.418e-4458.75Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_SYNS95.830e-4460.00Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]
SAHH_SYNS35.830e-4460.00Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832491 ID=CF832491; Name=CF832491; organism=Citrus sinensis; type=EST; length=824bp
GGGGTGCGGGCCCCACGAGTTTTTTTTTTTTTTTTATAATCATTCATCAG
TAAACAATAAGGATAACCTTATGCAGCAAAGCAAGCAAAACTTAAAACTG
CATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAAA
TCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAAC
TTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCCT
ACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCT
TTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCT
GTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAG
CCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGA
AGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCTT
CTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCA
CCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGCA
CATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTT
GGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCT
TAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAAG
TGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGNC
AACCATGATGATGTCCTTGTTACC
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