CF832491

Overview
NameCF832491
Unique NameCF832491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF832491_ssr319 microsatellite CF832491_ssr319:319..336. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1840 contig Csv1_Contig1840:1105..1928. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_PROMM (Adenosylhomocysteinase OS=Prochlorococcus marinus (strain MIT 9313) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.830e-44
Identity = 96/160 (60.00%), Postives = 111/160 (69.38%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   H+ +MK+ AIVCNIGHFDNEIDV  L+ YP      IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ +    +Y  +VYVLPKHLDE V           LT LTK+QADYISV  +GPYKP HYRY
Sbjct:  323 GNFQVIRHEHLIRMKDEAIVCNIGHFDNEIDVASLKDYPWEN---IKPQVDHITLPSGNK-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFSKGD--QYADQVYVLPKHLDEMVARLHLEKIGARLTELTKQQADYISVPVEGPYKPDHYRY 476          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_COXBU (Adenosylhomocysteinase OS=Coxiella burnetii GN=ahcY PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 5.830e-44
Identity = 94/160 (58.75%), Postives = 113/160 (70.62%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN DII   HM KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  285 GNTDIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGGKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_COXBN (Adenosylhomocysteinase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=ahcY PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 5.830e-44
Identity = 94/160 (58.75%), Postives = 113/160 (70.62%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN DII   HM KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  285 GNTDIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGAKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_COXB2 (Adenosylhomocysteinase OS=Coxiella burnetii (strain CbuG_Q212) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.830e-44
Identity = 94/160 (58.75%), Postives = 113/160 (70.62%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN DII   HM KMK+ AIVCNIGHFDNEID+  L+ Y   + + IKPQ D+ +FP+    + VLA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+ELW+     KY   VYVLPKHLDE+V           LT LT++QADYI V  +GP+K  HYRY
Sbjct:  285 GNTDIITHEHMLKMKDQAIVCNIGHFDNEIDIASLQDY---QWMNIKPQVDQVIFPD-GKRLTVLAQGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWQYPE--KYPIGVYVLPKHLDEEVARLHLERVGGKLTTLTEKQADYIGVDPEGPFKSEHYRY 438          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_DESVV (Adenosylhomocysteinase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.945e-44
Identity = 94/160 (58.75%), Postives = 111/160 (69.38%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN ++I   HM+ MK+ AIVCNIGHFDNEID+  LE   G   + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V           LTRL+K+QADYI VS +GP+KP HYRY
Sbjct:  324 GNCNVITGAHMEAMKDEAIVCNIGHFDNEIDMHYLENTEGCVCLNIKPQVDKWTLRSGRS-IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_DESVH (Adenosylhomocysteinase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=ahcY PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.945e-44
Identity = 94/160 (58.75%), Postives = 111/160 (69.38%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN ++I   HM+ MK+ AIVCNIGHFDNEID+  LE   G   + IKPQ D+W      S IIVLAEGRL+NLGCATGHPSFVMS SFTNQ +AQ+EL    +    E+KVY LPK LDE+V           LTRL+K+QADYI VS +GP+KP HYRY
Sbjct:  324 GNCNVITGAHMEAMKDEAIVCNIGHFDNEIDMHYLENTEGCVCLNIKPQVDKWTLRSGRS-IIVLAEGRLVNLGCATGHPSFVMSASFTNQTLAQIEL---ATNPDLERKVYTLPKKLDEEVARLHLDRLGVKLTRLSKDQADYIGVSPEGPFKPDHYRY 479          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_RHOPS (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain BisB5) GN=ahcY PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.299e-43
Identity = 92/160 (57.50%), Postives = 111/160 (69.38%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GNKDII + HM+ MK+ AIVCNIGHFDNEI +  L+    +K   IKPQ D   FP+    +I+L+EGRL+NLG ATGHPSFVMS SFTNQ +AQ+EL+     GKY+K+VYVLPK LDEKV           LT L K+QADYI V  +GP+K  HYRY
Sbjct:  316 GNKDIITIEHMRAMKDRAIVCNIGHFDNEIQIAHLKN---LKWDNIKPQVDEITFPD-GKRMILLSEGRLVNLGNATGHPSFVMSASFTNQTLAQIELFANNKDGKYKKEVYVLPKSLDEKVARLHLAKIGVKLTELRKDQADYIGVKVEGPFKADHYRY 471          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_RALPJ (Adenosylhomocysteinase OS=Ralstonia pickettii (strain 12J) GN=ahcY PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.299e-43
Identity = 94/162 (58.02%), Postives = 109/162 (67.28%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKE--KSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   HM KMK+ AIVCNIGHFDNEID+  +E Y   +   IKPQ D  +FP+    II+LA+GRL+NLGCATGHPS+VMS SF NQ IAQ+ELW E  K + KY   VY LPKHLDEKV           LT LT +QA YI VS +GPYK  HYRY
Sbjct:  317 GNYHVITHDHMAKMKDQAIVCNIGHFDNEIDIASVEKYQWEE---IKPQVDHVIFPDGKK-IIILAKGRLVNLGCATGHPSYVMSSSFANQTIAQIELWTEAVKGSNKYPVGVYTLPKHLDEKVARLQLKKLNAQLTELTDQQAAYIGVSKEGPYKADHYRY 474          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_NOVAD (Adenosylhomocysteinase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=ahcY PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.299e-43
Identity = 93/160 (58.13%), Postives = 115/160 (71.88%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN+D+I   HMK MK  +IVCNIGHFD+EI +  L  Y   K   IKP TD   FP+    II+LA+GRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y+ +VYVLPKHLDEKV           LT+L+K+QADYI VS +GP+KP HYRY
Sbjct:  315 GNEDVITAEHMKAMKPMSIVCNIGHFDSEIQISALNNY---KWTEIKPGTDLVEFPDGKQ-IIILAKGRLVNLGCATGHPSFVMSSSFTNQVLAQIELFTKNA--EYKNEVYVLPKHLDEKVAALHLEKLGVKLTKLSKKQADYIGVSQEGPFKPDHYRY 468          
BLAST of CF832491 vs. ExPASy Swiss-Prot
Match: SAHH_SYNPX (Adenosylhomocysteinase OS=Synechococcus sp. (strain WH8102) GN=ahcY PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.696e-43
Identity = 95/160 (59.38%), Postives = 114/160 (71.25%), Query Frame = -1
Query:  345 GNKDIIMVXHMKKMKNNAIVCNIGHFDNEIDVLGLETYPGVKRITIKPQTDRWVFPETNSGIIVLAEGRLMNLGCATGHPSFVMSCSFTNQVIAQLELWKEKSTGKYEKKVYVLPKHLDEKVXXXXXXXXXXXLTRLTKEQADYISVSADGPYKPLHYRY 824
            GN  +I   H++KMK+ AIVCNIGHFDNEIDV  L+ Y   +   IKPQ D    P  N  II+LAEGRL+NLGCATGHPSFVMS SFTNQV+AQ+EL+ + +  +Y K+VYVLPKHLDE V           LT L+K+QADYI+V  +GPYKP HYRY
Sbjct:  323 GNYQVIRNEHLEKMKDEAIVCNIGHFDNEIDVASLKGY---EWDNIKPQVDHITLPSGNR-IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELFTKGN--EYGKEVYVLPKHLDEMVARLHLDRIGAKLTELSKDQADYINVPVEGPYKPDHYRY 476          
The following BLAST results are available for this feature:
BLAST of CF832491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 241
Match NameE-valueIdentityDescription
SAHH_PROMM5.830e-4460.00Adenosylhomocysteinase OS=Prochlorococcus marinus ... [more]
SAHH_COXBU5.830e-4458.75Adenosylhomocysteinase OS=Coxiella burnetii GN=ahc... [more]
SAHH_COXBN5.830e-4458.75Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_COXB25.830e-4458.75Adenosylhomocysteinase OS=Coxiella burnetii (strai... [more]
SAHH_DESVV9.945e-4458.75Adenosylhomocysteinase OS=Desulfovibrio vulgaris s... [more]
SAHH_DESVH9.945e-4458.75Adenosylhomocysteinase OS=Desulfovibrio vulgaris (... [more]
SAHH_RHOPS1.299e-4357.50Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_RALPJ1.299e-4358.02Adenosylhomocysteinase OS=Ralstonia pickettii (str... [more]
SAHH_NOVAD1.299e-4358.13Adenosylhomocysteinase OS=Novosphingobium aromatic... [more]
SAHH_SYNPX1.696e-4359.38Adenosylhomocysteinase OS=Synechococcus sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832491 ID=CF832491; Name=CF832491; organism=Citrus sinensis; type=EST; length=824bp
GGGGTGCGGGCCCCACGAGTTTTTTTTTTTTTTTTATAATCATTCATCAG
TAAACAATAAGGATAACCTTATGCAGCAAAGCAAGCAAAACTTAAAACTG
CATCAAATACAACATAATCCAACACGGCCCCATCCAAAACCTTATTCAAA
TCCCAAATGGTCTTCAATCAACTGAAACAAATCCGTTTCTTTCCTCCAAC
TTTCCCACCACCCAAACACACACTACTACCAAATTTAAACCTAACATCCT
ACTACAGATCATCATTGAAAACAATCAAGCCGGCCAAATATTTTGTTTCT
TTCCCTCAAAACATTCACTCTTCTTCTTCTTCTTCTTCCACTTAGTACCT
GTAGTGAAGAGGCTTGTAAGGACCATCGGCGGACACACTGATGTAGTCAG
CCTGCTCCTTGGTGAGCCTGGTGAGCTTAGCTCCAAGTTTGCCAAGGTGA
AGAGCAGCAACCTTCTCATCGAGGTGCTTGGGCAGAACATACACCTTCTT
CTCGTACTTGCCGGTGCTCTTCTCCTTCCAGAGCTCAAGCTGGGCAATCA
CCTGATTGGTGAAGGAACAGGACATCACAAAGCTGGGGTGCCCAGTGGCA
CATCCCAAGTTCATGAGACGTCCCTCAGCCAACACGATGATGCCTGAGTT
GGTCTCGGGGAAGACCCACCTATCAGTTTGGGGCTTGATGGTAATGCGCT
TAACACCCGGGTAGGTCTCAAGACCGAGCACATCAATTTCATTATCAAAG
TGACCAATGTTGCAAACAATTGCATTGTTCTTCATCTTCTTCATGTGGNC
AACCATGATGATGTCCTTGTTACC
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