CF832500

Overview
NameCF832500
Unique NameCF832500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2483 contig Csv1_Contig2483:58..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRX2F_ARATH (Peroxiredoxin-2F, mitochondrial OS=Arabidopsis thaliana GN=PRXIIF PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.599e-26
Identity = 57/126 (45.24%), Postives = 82/126 (65.08%), Query Frame = 3
Query:  165 GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-GDFTVSSADDIL 539
            GKKV++FG+PGA+T  CS +HVP +    D+ K+K +D ++C+SVNDPF +  WA+      +++F  D   K+  +LGL+ DLS   LG RS R++  V+D KVKA NVE    DF V+ A+ IL
Sbjct:   73 GKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGWAEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAVNVEEAPSDFKVTGAEVIL 198          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRDX5_MOUSE (Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=Prdx5 PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.308e-25
Identity = 70/165 (42.42%), Postives = 96/165 (58.18%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 548
            MAPI VGD +P        E +  ++V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A  LK+K    + C+SVND FV++ W +       V+ LAD +  +  A  L LD S   L    R +RF++++D+  VKA NVE  G   T S A +IL  L
Sbjct:   49 MAPIKVGDAIPS---VEVFEGEPGKKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVACLSVNDVFVIEEWGRAHQAEGKVRLLADPTGAFGKATDLLLDDSLVSLFGNRRLKRFSMVIDNGIVKALNVEPDGTGLTCSLAPNILSQL 210          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRDX5_BOVIN (Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PRDX5 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.308e-25
Identity = 69/165 (41.82%), Postives = 97/165 (58.79%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 548
            MAPI VGD +P        E++   +V++  L  GKK +LFG+PGAFTP CS  H+PGF+E+AD LK+K +  + C++VND FV + WA+       V+ LAD S  +     L LD S   L    R +RF+++++D  VK+ NVE  G   T S A +IL  L
Sbjct:   58 MAPIKVGDAIPS---VEVFEKEPGNKVNLAELFKGKKGVLFGLPGAFTPGCSKTHLPGFVEQADALKAKGIQVVACLTVNDVFVTEEWARAHKAEGKVRLLADPSGTFGKETDLLLDDSLLFLFGNHRLKRFSMVIEDGIVKSLNVEPDGTGLTCSLAPNILSQL 219          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PMPA_CANBO (Putative peroxiredoxin-A OS=Candida boidinii GN=PMPA PE=1 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 1.146e-24
Identity = 68/167 (40.72%), Postives = 96/167 (57.49%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYF--DEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLK-VKAANVESGGDFTVSSADDILKAL 548
            MAPI  GD  P     Y+   E  +   + +      KK ++  VPGAFTP C+ +H+PG+I+    + SK VD +L IS NDPFV+K W K     + K + F++D + K T  LG  +DLS  GLGTRS R AL+V+    V+ A +E+GG+  VS+A  I+  L
Sbjct:    1 MAPIKRGDRFPTTDDVYYIPPEGGEPGPLELSKFVKTKKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVISQNDPFVLKGWKKELGAADAKKLVFVSDPNLKLTKKLGSTIDLSAIGLGTRSGRLALIVNRSGIVEYAAIENGGEVDVSTAQKIIAKL 167          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRDX5_HUMAN (Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=PRDX5 PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 1.954e-24
Identity = 69/165 (41.82%), Postives = 93/165 (56.36%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 548
            MAPI VGD +P        E +   +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A +I+  L
Sbjct:   53 MAPIKVGDAIP---AVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIISQL 214          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRDX5_CERAE (Peroxiredoxin-5, mitochondrial OS=Cercopithecus aethiops GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.333e-24
Identity = 69/165 (41.82%), Postives = 92/165 (55.76%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 548
            MAPI VGD +P        E +   +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A  I+  L
Sbjct:   54 MAPIKVGDAIP---AVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKAEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPSIISQL 215          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRDX5_PAPHA (Peroxiredoxin-5, mitochondrial OS=Papio hamadryas GN=PRDX5 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.354e-24
Identity = 69/165 (41.82%), Postives = 92/165 (55.76%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 548
            MAPI VGD +P        E +   +V++  L  GKK +LFGVPGAFTP CS  H+PGF+E+A+ LK+K V  + C+SVND FV   W +       V+ LAD +  +     L LD S   +    R +RF+++V D  VKA NVE  G   T S A  I+  L
Sbjct:   54 MAPIKVGDAIP---AVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVLACLSVNDAFVTGEWGRAHKVEGKVRLLADPTGAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPSIISQL 215          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PMPB_CANBO (Putative peroxiredoxin-B OS=Candida boidinii GN=PMPB PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 4.354e-24
Identity = 67/167 (40.12%), Postives = 95/167 (56.89%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYF--DEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLK-VKAANVESGGDFTVSSADDILKAL 548
            MAPI  GD  P     Y+   E  +     +      KK ++  VPGAFTP C+ +H+PG+I+    + SK VD +L I+ NDPFV+K W K     + K + F++D + K T  LG  +DLS  GLGTRS R AL+V+    V+ A +E+GG+  VS+A  I+  L
Sbjct:    1 MAPIKRGDRFPTTDDVYYIPPEGGEPGAFELSKFVKTKKFVVVSVPGAFTPPCTEQHLPGYIKNLPRILSKGVDFVLVITQNDPFVLKGWKKELGAADAKKLIFVSDPNLKLTKKLGSTIDLSSIGLGTRSGRLALIVNRSGIVEYAAIENGGEVDVSTAQKIIAKL 167          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRDX5_RAT (Peroxiredoxin-5, mitochondrial OS=Rattus norvegicus GN=Prdx5 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.161e-23
Identity = 68/165 (41.21%), Postives = 91/165 (55.15%), Query Frame = 3
Query:   63 MAPIAVGDPLPDGILAYFDEQDQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGL--GTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 548
            MAPI VGD +P        E +  ++V++  L   KK +LFGVPGAFTP CS  H+PGF+E+A  LK+K    + C+SVND FV   W +       V+ LAD +  +     L LD S   L    R +RF++++D   VKA NVE  G   T S A +IL  L
Sbjct:   52 MAPIKVGDTIPS---VEVFEGEPGKKVNLAELFKDKKGVLFGVPGAFTPGCSKTHLPGFVEQAGALKAKGAQVVACLSVNDAFVTAEWGRAHQAEGKVQLLADPTGAFGKETDLLLDDSLVSLFGNRRLKRFSMVIDKGVVKALNVEPDGTGLTCSLAPNILSQL 213          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: MALF2_MALFU (Putative peroxiredoxin OS=Malassezia furfur PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 8.211e-23
Identity = 59/166 (35.54%), Postives = 88/166 (53.01%), Query Frame = 3
Query:   75 AVGDPLPDGILAYFDEQDQLQQVSVHSLAA---------GKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVK--AANVESGGDFTVSSADDIL 539
            A G+ +PD ++ Y     +L    V  +           GKKV++  +PGA+TP C  +H+P  +++ DELK+K VD +  I+ NDPFVM AW         V F  D    ++ ALG  +DLS K  G R+ R+AL++DD K+   A++    G    +S D IL
Sbjct:    9 AKGNEIPDTLMGYIPWTPELDSGEVCGIPTTFKTRDEWKGKKVVIVSIPGAYTPICHQQHIPPLVKRVDELKAKGVDAVYVIASNDPFVMAAWGNFNNAKDKVVFATDIDLAFSKALGATIDLSAKHFGERTARYALIIDDNKIVDFASDEGDTGKLQNASIDTIL 174          
The following BLAST results are available for this feature:
BLAST of CF832500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
PRX2F_ARATH1.599e-2645.24Peroxiredoxin-2F, mitochondrial OS=Arabidopsis tha... [more]
PRDX5_MOUSE2.308e-2542.42Peroxiredoxin-5, mitochondrial OS=Mus musculus GN=... [more]
PRDX5_BOVIN2.308e-2541.82Peroxiredoxin-5, mitochondrial OS=Bos taurus GN=PR... [more]
PMPA_CANBO1.146e-2440.72Putative peroxiredoxin-A OS=Candida boidinii GN=PM... [more]
PRDX5_HUMAN1.954e-2441.82Peroxiredoxin-5, mitochondrial OS=Homo sapiens GN=... [more]
PRDX5_CERAE3.333e-2441.82Peroxiredoxin-5, mitochondrial OS=Cercopithecus ae... [more]
PRDX5_PAPHA4.354e-2441.82Peroxiredoxin-5, mitochondrial OS=Papio hamadryas ... [more]
PMPB_CANBO4.354e-2440.12Putative peroxiredoxin-B OS=Candida boidinii GN=PM... [more]
PRDX5_RAT2.161e-2341.21Peroxiredoxin-5, mitochondrial OS=Rattus norvegicu... [more]
MALF2_MALFU8.211e-2335.54Putative peroxiredoxin OS=Malassezia furfur PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832500 ID=CF832500; Name=CF832500; organism=Citrus sinensis; type=EST; length=645bp
TCTCGCCCTACCCTGTTTAATCGTGTATTTAATCACAGGCGCGGATCAGA
TTCTCTCTCTAAATGGCTCCTATCGCAGTCGGTGACCCCTTGCCGGACGG
TATTCTCGCTTACTTCGACGAACAAGATCAGTTGCAGCAAGTGTCCGTAC
ACTCGCTCGCTGCCGGGAAAAAGGTCATCCTCTTTGGCGTCCCCGGTGCT
TTCACTCCTACTTGCAGCTTGAAGCATGTGCCTGGATTCATCGAGAAGGC
TGATGAGTTGAAGTCAAAAGACGTCGATGAAATTCTCTGCATAAGCGTTA
ATGACCCATTTGTGATGAAGGCATGGGCCAAAACATTTCCTGAGAACAAG
AGCGTGAAGTTCCTGGCTGATGGCTCAGCAAAATACACCCATGCTTTGGG
GCTTGAGCTTGACCTCAGTGAGAAAGGACTTGGCACCCGGTCAAGGAGGT
TTGCTCTCTTGGTTGATGACCTCAAGGTGAAGGCCGCAAATGTTGAATCT
GGTGGAGATTTCACAGTCTCCAGTGCTGATGACATCCTCAAGGCTCTTTA
AATTTGCAGTTCCATCCCAGCTGCTTAGTGTTGGTTGAGTTATTACTTCC
TTTTGCTGTGCTATGCTTAGGATGAATATAAACCCAGTGGATCTC
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