CF832500

Overview
NameCF832500
Unique NameCF832500
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2483 contig Csv1_Contig2483:58..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: Y1621_SYNY3 (Putative peroxiredoxin sll1621 OS=Synechocystis sp. (strain PCC 6803) GN=sll1621 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.389e-22
Identity = 57/142 (40.14%), Postives = 86/142 (60.56%), Query Frame = 3
Query:  144 SVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGD------FTVSSADDILKAL 548
            +   +  GKKV+LF +PGAFTPTCS  H+P + +  +E ++  VD+I+C+SVND FVM  W K    +K VK L DG+ ++T  +G+ ++ S  G G RS R+++ V+D K++   +E   GD      F  S AD +L  L
Sbjct:   32 TTEQIFGGKKVVLFSLPGAFTPTCSSNHLPRYEQLFEEFQALGVDDIICLSVNDAFVMFQWGKQIGADK-VKLLPDGNGEFTRKMGMLVEKSNLGFGMRSWRYSMFVNDGKIEKMFIEPEFGDNCPVDPFECSDADTMLAYL 172          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PRX5_HAEIN (Hybrid peroxiredoxin hyPrx5 OS=Haemophilus influenzae GN=HI0572 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.322e-22
Identity = 58/144 (40.28%), Postives = 86/144 (59.72%), Query Frame = 3
Query:  126 DQLQQVSVHSLAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANV---ESGGDFTVSSADDILKAL 548
            D+   V+   L   K VI+F +PGAFTPTCS  H+P + E A   K   VD+IL +SVND FVM AW K   +++++ F+ DG+ ++T  +G+ +   + G G RS R+++LV +  V+   +   E G  F VS AD +LK L
Sbjct:   20 DKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAW-KEDEKSENISFIPDGNGEFTEGMGMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEPNEPGDPFKVSDADTMLKYL 162          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: YRP2_RHIET (Putative peroxiredoxin in rpoN2 3'region OS=Rhizobium etli PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 6.506e-20
Identity = 57/136 (41.91%), Postives = 80/136 (58.82%), Query Frame = 3
Query:  162 AGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-GD------FTVSSADDILKAL 548
            +GK+VILF +PGAFTP CS   +P F     E K   +D+I C+SVND FVM AW K+    K+VK + DGS ++T  +G+ +     G G RS R+A ++++  V+    E G GD      + VSS  +ILK L
Sbjct:   39 SGKRVILFSLPGAFTPICSTFQLPDFESLYVEFKKNGIDDIYCLSVNDAFVMNAWGKS-QGLKNVKLIPDGSGEFTRKMGMLVAKDNLGFGLRSWRYAAVINNGVVEGWFEEEGFGDNCATDPYGVSSPQNILKCL 173          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PMP20_EMENI (Putative peroxiredoxin pmp20 OS=Emericella nidulans GN=AN8692 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.449e-19
Identity = 60/174 (34.48%), Postives = 99/174 (56.90%), Query Frame = 3
Query:   63 MAPIAVGDPLP-DGILAYFDEQDQLQQVSVHSLA---------AGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAK-TFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 548
            M+ +  GD  P D + +Y    ++  +++   +          A KKVILF +PGAFTP CS +HVP +IE+  E+++K VD +  ++ ND FVM AW K    +N  + FL+D  AK++ ++G      E+G   R++R+A+++D  KV  A +E +      SSA+ ++K L
Sbjct:    1 MSGLKAGDSFPADVVFSYIPWTEEKGEITSCGIPINYYASKEWADKKVILFALPGAFTPVCSARHVPEYIERLPEIRAKGVDVVAVLAYNDAFVMSAWGKANGVKNDDILFLSDPEAKFSKSIGW---ADEEG---RTKRYAIVLDHGKVTYAALEPAKNHLEFSSAETVIKHL 168          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: Y4VD_RHISN (Putative peroxiredoxin y4vD OS=Rhizobium sp. (strain NGR234) GN=NGR_a01200 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.217e-19
Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  162 AGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFPENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-------GDFTVSSADDILKAL 548
            +GK+V+LF +PGAFTPTCS + +P F    DE     ++ + C+SVND FVM AW K     K V+ + DGS ++T  +G+ +     G G RS R+A +V+D  V+    E G         +  SS  +IL+ L
Sbjct:   39 SGKRVVLFSLPGAFTPTCSTQQLPDFERLYDEFGKVGIEAVYCLSVNDAFVMNAWGKALGLEK-VRLIPDGSGEFTRKMGMLVAKDNLGFGMRSWRYAAVVNDSVVEQWFEEEGFSDNCESDPYWASSPQNILETL 173          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PMP20_ASPFU (Putative peroxiredoxin pmp20 OS=Aspergillus fumigatus GN=pmp20 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.217e-19
Identity = 59/174 (33.91%), Postives = 96/174 (55.17%), Query Frame = 3
Query:   63 MAPIAVGDPLP-DGILAYFDEQDQLQQVSVHSLA---------AGKKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFP-ENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVE-SGGDFTVSSADDILKAL 548
            M+ +  GD  P D + +Y    +   +++   +          A KKVILF +PGAFTP CS +HVP +IEK  E+++K VD +  ++ ND +VM AW K        + FL+D  A+++ ++G      E+G   R++R+AL++D  K+  A +E +      SSA+ +LK L
Sbjct:    1 MSGLKAGDSFPSDVVFSYIPWSEDKGEITACGIPINYNASKEWADKKVILFALPGAFTPVCSARHVPEYIEKLPEIRAKGVDVVAVLAYNDAYVMSAWGKANQVTGDDILFLSDPDARFSKSIGW---ADEEG---RTKRYALVIDHGKITYAALEPAKNHLEFSSAETVLKHL 168          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PMP20_LIPKO (Putative peroxisomal peroxiredoxin OS=Lipomyces kononenkoae PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.093e-18
Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 3
Query:  168 KKVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTF-PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESGGDFTVSSADDILKAL 548
            K V++  +PGAFTPTC+  H+P F+EK   LKS  VD ++ +S NDPFV  A+ K     +++  F +D  A+++ + GL LDL     GTR+ R+A++V +  VK    +S G    S  D +L AL
Sbjct:   41 KTVVIVAIPGAFTPTCTANHIPPFVEKFTALKSAGVDAVIVLSANDPFVQSAFGKALGVTDEAFIFASDPGAEFSKSAGLSLDL-PPAFGTRTARYAIIVSNGVVKYVEKDSEG-VAGSGVDAVLAAL 166          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: AHP1_YEAST (Peroxiredoxin type-2 OS=Saccharomyces cerevisiae GN=AHP1 PE=1 SV=4)

HSP 1 Score: 91.6633 bits (226), Expect = 3.570e-18
Identity = 49/136 (36.03%), Postives = 83/136 (61.03%), Query Frame = 3
Query:  156 LAAGKKVILFGVPGAFTPTCSLKHVPGFIEKADEL-KSKDVDEILCISVNDPFVMKAWAKTF--PENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDD--LKVKAANVESGGDFTVSSADDILKAL 548
            ++  KKVI+ G P AF+PTC++ H+PG+I   DEL K K+VD+++ ++V++PF  +AWAK+    +   +KF +D    +T ++G EL + +      S R+A++V++  +   A     G D TVSS + +L  L
Sbjct:   43 ISENKKVIITGAPAAFSPTCTVSHIPGYINYLDELVKEKEVDQVIVVTVDNPFANQAWAKSLGVKDTTHIKFASDPGCAFTKSIGFELAVGDGVYW--SGRWAMVVENGIVTYAAKETNPGTDVTVSSVESVLAHL 176          
BLAST of CF832500 vs. ExPASy Swiss-Prot
Match: PMP20_SCHPO (Putative peroxiredoxin pmp20 OS=Schizosaccharomyces pombe GN=pmp20 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.500e-16
Identity = 52/129 (40.31%), Postives = 74/129 (57.36%), Query Frame = 3
Query:  171 KVILFGVPGAFTPTCSLKHVPGFIEKADELKSKDVDEILCISVNDPFVMKAWAKTFP--ENKSVKFLADGSAKYTHALGLELDLSEKGLGTRSRRFALLVDDLKVKAANVESG-GDFTVSSADDILKAL 548
            K I+ GVPGAFTP CS   VPG+I    +  +K +  I  ++VND FV KAW K+F   E   V F+AD + ++T A     D S      RS+R+A +V++ KV    +E+   D  +SSAD +L +L
Sbjct:   29 KFIIVGVPGAFTPPCS-SQVPGYIANEKQFAAKGISGIYVVAVNDVFVTKAWKKSFDGGEQSGVHFVADWNGEFTKAFDAGFDASGLLGPLRSKRYAAVVENGKVVKVFIENEVTDVDISSADKVLSSL 156          
The following BLAST results are available for this feature:
BLAST of CF832500 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
Y1621_SYNY32.389e-2240.14Putative peroxiredoxin sll1621 OS=Synechocystis sp... [more]
PRX5_HAEIN5.322e-2240.28Hybrid peroxiredoxin hyPrx5 OS=Haemophilus influen... [more]
YRP2_RHIET6.506e-2041.91Putative peroxiredoxin in rpoN2 3'region OS=Rhizob... [more]
PMP20_EMENI1.449e-1934.48Putative peroxiredoxin pmp20 OS=Emericella nidulan... [more]
Y4VD_RHISN4.217e-1938.24Putative peroxiredoxin y4vD OS=Rhizobium sp. (stra... [more]
PMP20_ASPFU4.217e-1933.91Putative peroxiredoxin pmp20 OS=Aspergillus fumiga... [more]
PMP20_LIPKO2.093e-1839.84Putative peroxisomal peroxiredoxin OS=Lipomyces ko... [more]
AHP1_YEAST3.570e-1836.03Peroxiredoxin type-2 OS=Saccharomyces cerevisiae G... [more]
PMP20_SCHPO1.500e-1640.31Putative peroxiredoxin pmp20 OS=Schizosaccharomyce... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832500 ID=CF832500; Name=CF832500; organism=Citrus sinensis; type=EST; length=645bp
TCTCGCCCTACCCTGTTTAATCGTGTATTTAATCACAGGCGCGGATCAGA
TTCTCTCTCTAAATGGCTCCTATCGCAGTCGGTGACCCCTTGCCGGACGG
TATTCTCGCTTACTTCGACGAACAAGATCAGTTGCAGCAAGTGTCCGTAC
ACTCGCTCGCTGCCGGGAAAAAGGTCATCCTCTTTGGCGTCCCCGGTGCT
TTCACTCCTACTTGCAGCTTGAAGCATGTGCCTGGATTCATCGAGAAGGC
TGATGAGTTGAAGTCAAAAGACGTCGATGAAATTCTCTGCATAAGCGTTA
ATGACCCATTTGTGATGAAGGCATGGGCCAAAACATTTCCTGAGAACAAG
AGCGTGAAGTTCCTGGCTGATGGCTCAGCAAAATACACCCATGCTTTGGG
GCTTGAGCTTGACCTCAGTGAGAAAGGACTTGGCACCCGGTCAAGGAGGT
TTGCTCTCTTGGTTGATGACCTCAAGGTGAAGGCCGCAAATGTTGAATCT
GGTGGAGATTTCACAGTCTCCAGTGCTGATGACATCCTCAAGGCTCTTTA
AATTTGCAGTTCCATCCCAGCTGCTTAGTGTTGGTTGAGTTATTACTTCC
TTTTGCTGTGCTATGCTTAGGATGAATATAAACCCAGTGGATCTC
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