CF832505

Overview
NameCF832505
Unique NameCF832505
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9328 contig Csv1_Contig9328:215..1069. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832505 vs. ExPASy Swiss-Prot
Match: C77A2_SOLME (Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 66/236 (27.97%), Postives = 106/236 (44.92%), Query Frame = 1
Query:   49 IITCLVSVLA-VVYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTT--DLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSN---YGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPVLSWF 738
            I T L  V++ ++YF     +S+K   KLPPGP G P VG L  +  +     +   EL   YGPIF L +G +  +++S+  LV + +  +   FA R  P      T    D    N   YGP W  LRK  V   +S+  L    A+RK  +   I  +    +     + + + +   + C++  + +G  +E+ E+ I  +   +K  L  L      P + D  P+LS F
Sbjct:   16 IFTILAFVISSIIYFLSKKAESKKL--KLPPGPPGWPVVGNLLQVARSGKPFFQIMRELRQKYGPIFTLRMGTRTMIILSNADLVHEALILKGQVFATR--PRENPTRTVFSCDKFTVNAAVYGPVWRSLRKNMVQNGLSSIRLKEFRAVRKSAMDKMIEKIRAEADANEGVVWVLKNARFAVFCILLAMCFG--VEMDEKTIEKIDQMMKSVLIAL-----DPRLDDYLPILSPF 240          
BLAST of CF832505 vs. ExPASy Swiss-Prot
Match: C71AM_ARATH (Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=CYP71A22 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.994e-11
Identity = 58/262 (22.14%), Postives = 110/262 (41.98%), Query Frame = 1
Query:   49 IITCLVSVLAVVYFAWNVNKSRKANAKLPPGPRGLPAVGYLPFLGTTDLHKKFTELCGVYGPIFKLWLGNKLCVVVSSPSLVKQVVRDQDTTFADRDPPIAGLVATFGGNDIAWSNYGPEWSKLRKFFVGKMMSNASLDACYALRKQEVKNTIRDLYNNDNKIGKPIDIGELSISTLVCVIQNILWGEALEIREEGITNLGAELKFKLAELMVLMGTPNISDVFPVLSWFD-IQGIERKAKKISLWFENIINSTVEKYRSKD 831
            I+  L+  + +++F     K +K+N   P  P  LP +G L  LG    H+    L   YGP+  L  G    +VVSS  + + +++  D  FA R          +   D+A + YG  W +++   V  +++N  + +   +R++E+   +  +  + +     +++ EL  S    VI  +  G               + K  +  L  L+G   +    P L+W D I G++ + KK     +  +   V+ +   D
Sbjct:    8 ILLSLIIFITILFFI-KQKKGKKSNT--PASPPRLPLIGNLHQLGRHP-HRSLCSLSNRYGPLMLLRFGLVPVLVVSSADVARDILKTYDRVFASRPRSKIFEKIFYEARDVALAPYGEYWRQMKSVCVLHLLTNKMVRSFRNVRQEEISLMMEKIQKSSS---LQVNLSELLGSLTNDVISRVALGRKYSDE--------TDFKELMKRLTKLLGEFCVGTYVPWLAWIDWISGLDGQLKKTGNDLDEFLEKVVQDHEDGD 254          
The following BLAST results are available for this feature:
BLAST of CF832505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 132
Match NameE-valueIdentityDescription
C77A2_SOLME8.994e-1127.97Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77... [more]
C71AM_ARATH8.994e-1122.14Cytochrome P450 71A22 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P11_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832505 ID=CF832505; Name=CF832505; organism=Citrus sinensis; type=EST; length=855bp
TCGAATATGGCTTTGCGGGTCGATGATGCCAGCAGCAATGACACTGCAAT
TATCACTTGTTTAGTTTCTGTGCTTGCCGTGGTTTATTTCGCATGGAATG
TGAACAAATCAAGGAAAGCAAATGCTAAACTTCCACCAGGACCTCGCGGC
TTGCCTGCAGTCGGATACCTCCCATTTCTCGGAACTACTGACTTGCACAA
GAAATTCACGGAATTATGTGGAGTTTACGGTCCGATCTTCAAGCTCTGGC
TCGGAAATAAATTATGTGTCGTGGTGAGCTCACCTTCCCTAGTTAAACAA
GTGGTTCGTGATCAAGATACAACGTTCGCAGACCGTGACCCGCCGATCGC
TGGGCTAGTGGCCACCTTTGGTGGCAATGATATTGCATGGTCCAATTACG
GTCCCGAATGGAGTAAGTTGCGCAAATTTTTTGTGGGCAAGATGATGAGT
AACGCAAGCCTTGATGCTTGTTATGCTCTAAGAAAACAAGAGGTTAAAAA
TACTATCAGGGATTTGTATAACAACGACAACAAAATTGGTAAGCCCATTG
ACATTGGTGAATTGTCAATTTCAACCTTGGTATGTGTTATTCAGAACATA
CTGTGGGGTGAAGCGCTTGAAATAAGAGAGGAAGGGATCACTAATCTTGG
GGCTGAGCTAAAATTTAAGCTGGCAGAACTCATGGTCCTAATGGGAACAC
CGAATATTTCGGACGTCTTTCCAGTGCTTTCATGGTTTGATATACAAGGT
ATAGAGAGGAAAGCAAAGAAGATTTCTCTCTGGTTTGAAAATATTATAAA
TTCTACTGTTGAAAAGTATAGAAGCAAGGACTTTATTGTTGAAGGCAAAG
AAAGA
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