CF832506

Overview
NameCF832506
Unique NameCF832506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2AD_HUMAN (Cytochrome P450 2A13 OS=Homo sapiens GN=CYP2A13 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 45/158 (28.48%), Postives = 81/158 (51.27%), Query Frame = -2
Query:  218 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTK 691
            LM+HP+V  KV EE+ +V+G +   +     K+ Y +AV+ E  R    LP+ +  R ++      + +PK T +   + ++ RDP+ + NP +F P+ FL+   + K      +  ++PF  G+R C G  LA   L     +++ +F ++ P   K
Sbjct:  317 LMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRFFSNPRDFNPQHFLDKKGQFK-----KSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNFRFKSPQSPK 469          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP27A_RABIT (Sterol 26-hydroxylase, mitochondrial OS=Oryctolagus cuniculus GN=CYP27A1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 53/188 (28.19%), Postives = 89/188 (47.34%), Query Frame = -2
Query:  146 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWEL-PAGTKLNLSENFGIVIKKKEPLIAIPTPR 706
            W +  L ++P++   +++E+  VV      +      +  L AV+KET RL+P +P        +   +GG+  PK+T  +   +   RDP  +  P  F P R+L  G + +   + + F  +PFG G R C G  +AE  +  +LA L+  +E  L P   ++       +V  KK  L  +PT R
Sbjct:  349 WALYHLSKNPEIQAALRKEVVGVVAAGQVPQHKDFAHMPLLKAVLKETLRLYPVIPANSRIIVDKEIEVGGFLFPKNTQFVFCHYVTSRDPSTFSEPDTFWPYRWLRKG-QPETSKTQHPFGSVPFGYGVRACLGRRIAELEMQLLLARLIQRYELMLAPETGEVQSVARIVLVPNKKVGLRFLPTQR 535          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2E1_CANFA (Cytochrome P450 2E1 OS=Canis familiaris GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 50/149 (33.56%), Postives = 80/149 (53.69%), Query Frame = -2
Query:  245 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            LM++P+V +K+ EE+ +V+G           ++ Y+DAVV E  R    LP  +P  A++     GY IPK T ++  + ++  D Q + +P +F+PE FLN     KF YS     +  F +G+R+C G  LA   L   L+++L  F
Sbjct:  315 LMKYPEVEEKLHEEIDRVIGPSRVPAIKDRLEMPYMDAVVHEIQRFIDLLPSNLPHVANQDTMFRGYVIPKGTVVIPTLDSVLFDKQEFPDPEKFKPEHFLN--ENGKFKYSD---YFKAFSAGKRVCVGEGLARMELFLFLSAILQHF 458          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2CF_RABIT (Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cuniculus GN=CYP2C15 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 49/153 (32.03%), Postives = 81/153 (52.94%), Query Frame = -2
Query:  242 LMQHPQVMKKVQEELAQVVGM--DSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLN-VGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE 691
            L++HP+V  KVQEE+ +V+G     C+++    ++ Y DAV+ E  R    +P+ +P   +       Y IPK   ++ ++ ++  D + + NP  F P  FL+  G   K DY      ++PF +G+RMC G  LA   L   L S+L +F+
Sbjct:  201 LLKHPEVAAKVQEEIERVIGRHRSPCMQD--RSRMPYTDAVIHEIQRYIDLIPINLPHAVTRDIKFRNYFIPKGMNIITSLTSVLHDEKEFPNPKVFDPGHFLDESGNFKKSDY------FMPFSAGKRMCVGEGLARMELFLFLTSILQNFK 345          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2BJ_MOUSE (Cytochrome P450 2B19 OS=Mus musculus GN=Cyp2b19 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 45/154 (29.22%), Postives = 77/154 (50.00%), Query Frame = -2
Query:  230 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 691
            ++++P V +KVQ+E+ QV+G           K+ Y DAV+ E  R     P+ +P + ++     GY IPK+T +   + +   DP+ ++ P  F PE FL+     K      N  ++PF +G+R+C G  +A   L     ++L +F    P
Sbjct:  315 MLKYPHVAEKVQKEIDQVIGSHRLPTLDDRTKMPYTDAVIHEIQRFTDLAPIGLPHKVTKDTLFRGYLIPKNTEVYPILSSALHDPRYFEQPDSFNPEHFLDANGALK-----TNEAFMPFSTGKRICLGEGIARNELFLFFTTILQNFSLASP 463          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2A9_MESAU (Cytochrome P450 2A9 OS=Mesocricetus auratus GN=CYP2A9 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 46/154 (29.87%), Postives = 81/154 (52.60%), Query Frame = -2
Query:  230 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 691
            LM++P+V  KV EE+ +V+G +   +     K+ Y +AV+ E  R     PL +PR+  ++ +  G+ +PKDT +   + ++  DP+ + +P  F P+ FL+   + K         ++PF  G+R C G  LA   L   L ++L +F  + P
Sbjct:  316 LMKYPEVEAKVHEEIDRVIGRNRQPQFEDRMKMPYTEAVINEIQRFANLAPLGIPRKTIKNTTFRGFFLPKDTDVYPILGSLLTDPKFFTSPKHFNPQNFLDDRGQLK-----KIAAFVPFSVGKRFCLGDGLARMELFLFLTTILQNFRLKFP 464          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2A6_HUMAN (Cytochrome P450 2A6 OS=Homo sapiens GN=CYP2A6 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 44/149 (29.53%), Postives = 77/149 (51.68%), Query Frame = -2
Query:  245 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            LM+HP+V  KV EE+ +V+G +   +     K+ Y++AV+ E  R    +P+ + RR  +      + +PK T +   + ++ RDP  + NP +F P+ FLN   + K      +  ++PF  G+R C G  LA   L     +++ +F
Sbjct:  317 LMKHPEVEAKVHEEIDRVIGKNRQPKFEDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSNPQDFNPQHFLNEKGQFK-----KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 460          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP4AO_PIG (Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 43/155 (27.74%), Postives = 74/155 (47.74%), Query Frame = -2
Query:  242 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE 706
            W +  L  HP+  ++ +EE+  ++G  + +   HL ++ Y    +KE  RL+P +P +    +       G ++P   TL L+++ +H +PQ+W NP EF P RF             ++  ++PF  G R C G   A   +   +A  L  FE
Sbjct:  326 WILYALASHPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPGVSRELSKPITFPDGRSLPAGITLSLSIYGLHHNPQVWPNPEEFDPSRFAPGSAR-------HSHAFMPFSGGSRNCIGKQFAMNEMKVAVALTLLRFE 473          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2BC_RAT (Cytochrome P450 2B12 OS=Rattus norvegicus GN=Cyp2b12 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 46/158 (29.11%), Postives = 78/158 (49.37%), Query Frame = -2
Query:  230 TMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 703
            T   ++++P V +KVQ+E+ QV+G           K+ Y DAV+ E  R     P+ +P R ++     GY +PK+T +   + +   DP+ ++ P  F PE FL+     K      +  +LPF +G+R+C G  +A   L     ++L +F    P
Sbjct:  311 TFLIMLKYPHVAEKVQKEIDQVIGSHRLPTPDDRTKMPYTDAVIHEIQRFADLTPIGLPHRVTKDTVFRGYLLPKNTEVYPILSSALHDPRYFEQPDTFNPEHFLDANGALK-----KSEAFLPFSTGKRICLGEGIARNELFIFFTAILQNFTLASP 463          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2B6_HUMAN (Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = -2
Query:  230 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 691
            ++++P V ++V  E+ QV+G     E     K+ Y +AV+ E  R    LP+ VP   ++  S  GY IPKDT + L +     DP  ++ P  F P+ FL+     K         ++PF  G+R+C G  +A   L     ++L +F    P
Sbjct:  314 MLKYPHVAERVYREIEQVIGPHRPPELHDRAKMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALK-----KTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASP 462          
The following BLAST results are available for this feature:
BLAST of CF832506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP2AD_HUMAN4.400e-1528.48Cytochrome P450 2A13 OS=Homo sapiens GN=CYP2A13 PE... [more]
CP27A_RABIT4.400e-1528.19Sterol 26-hydroxylase, mitochondrial OS=Oryctolagu... [more]
CP2E1_CANFA5.747e-1533.56Cytochrome P450 2E1 OS=Canis familiaris GN=CYP2E1 ... [more]
CP2CF_RABIT5.747e-1532.03Cytochrome P450 2C15 (Fragment) OS=Oryctolagus cun... [more]
CP2BJ_MOUSE5.747e-1529.22Cytochrome P450 2B19 OS=Mus musculus GN=Cyp2b19 PE... [more]
CP2A9_MESAU5.747e-1529.87Cytochrome P450 2A9 OS=Mesocricetus auratus GN=CYP... [more]
CP2A6_HUMAN5.747e-1529.53Cytochrome P450 2A6 OS=Homo sapiens GN=CYP2A6 PE=1... [more]
CP4AO_PIG7.505e-1527.74Cytochrome P450 4A24 OS=Sus scrofa GN=CYP4A24 PE=2... [more]
CP2BC_RAT7.505e-1529.11Cytochrome P450 2B12 OS=Rattus norvegicus GN=Cyp2b... [more]
CP2B6_HUMAN7.505e-1529.87Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832506 ID=CF832506; Name=CF832506; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTGACATAAAAATAGCAACGGAGGACTTTTATTAAAATATTAT
ATTACGATTGAACTTGAAATAACATATAAATCTTCCGATACTCACAAAAT
CATCACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTG
GTGTTGGAATAGCAATCAAAGGCTCTTTTTTCTTAATGACAATCCCAAAA
TTTTCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGA
GTGCAATAACGAAGCCAAAACAAACATCAGCATCCTCTCAGCTAGAGGAA
TCCCAGCACACATTCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTG
TTACCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTC
GGGTCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAG
CCCAAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCA
ATGCTGCCACTCTCGCTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGG
ATGCAGACGAAATGTTTCTTTCACCACAGCATCTAAATATTTCAATTTAG
GCAAATGAAATTCTTCAACACAACTGTCCATGCCCACAACTTGAGCTAAT
TCTTCCTGAACTTTCTTCATTACTTGTGGATGCTGCATCAACTCTGCCAT
TGTCCAT
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