CF832506

Overview
NameCF832506
Unique NameCF832506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2E1_PIG (Cytochrome P450 2E1 OS=Sus scrofa GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = -2
Query:  245 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            LM++P+V +K+ EE+ +V+G +          + YLDAVV E  R    +P  +P  A+       Y IPK T ++  + ++  D Q +  P +F+PE FLN     KF YS +   +  F +G+R+C G  LA   L   +A++L  F
Sbjct:  315 LMKYPEVEEKLHEEIDRVIGPNRIPAIKDRLVMPYLDAVVHEIQRFIDLIPSNLPHEATRDTDFRDYIIPKGTVVIPTLDSVLYDSQEFPEPEKFKPEHFLN--ENGKFKYSDH---FKAFSAGKRVCVGEGLARMELFLFMAAILQHF 458          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2C2_RABIT (Cytochrome P450 2C2 OS=Oryctolagus cuniculus GN=CYP2C2 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 58/182 (31.87%), Postives = 91/182 (50.00%), Query Frame = -2
Query:  158 LMQHPQVMKKVQEELAQVVGM--DSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEN-FGIVIKKKEPLIAI 691
            LM+HP+V+ KVQEE+ +V+G     C+++    ++ Y DA V E  R    +P  VP     +     Y IPK T ++ ++ ++  D + + NP  F P  FL+  G   K DY      ++PF +G+R+C G  LA   L   L ++L +F    P     N+ EN F   I +  PL  +
Sbjct:  313 LMKHPEVIAKVQEEIERVIGRHRSPCMQD--RSRMPYTDATVHEIQRYINLIPNNVPHTTICNLKFRNYLIPKGTDVLTSLSSVLHDDKEFPNPDRFDPGHFLDASGNFRKSDY------FMPFSTGKRVCVGEALARMELFLFLTAILQNFT-PKPLVNPNNVDENPFSSGIVRVPPLYRV 485          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2A7_HUMAN (Cytochrome P450 2A7 OS=Homo sapiens GN=CYP2A7 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 43/149 (28.86%), Postives = 77/149 (51.68%), Query Frame = -2
Query:  245 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            LM+HP+V  KV EE+ +V+G +   +     K+ Y++AV+ E  R    +P+ + RR  +      + +PK T +   + ++ RDP  + NP +F P+ FL+   + K      +  ++PF  G+R C G  LA   L     +++ +F
Sbjct:  317 LMKHPEVEAKVHEEIDRVIGKNRQPKFEDRTKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVFPMLGSVLRDPSFFSNPQDFNPQHFLDDKGQFK-----KSDAFVPFSIGKRNCFGEGLARMELFLFFTTVMQNF 460          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: C513D_DICDI (Probable cytochrome P450 513D1 OS=Dictyostelium discoideum GN=cyp513d1 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 48/141 (34.04%), Postives = 70/141 (49.65%), Query Frame = -2
Query:  182 KLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSE--NFGIVIK 598
            K  YL A +KE  R +P  PL VP   +E   I GY I K T ++ N+++ H       NPLEF PERFL+         S N  + + FG G+R C G  + E  +   L  L+  F++  P    L L++   FG+ ++
Sbjct:  377 KTPYLVAFIKEVKRYYPCAPLSVPHLLTEDCEIQGYKIAKGTQVIQNIYSTHLSQSFCSNPLEFSPERFLD---------STNEPKIITFGIGQRKCPGENIFEIEIYIFLVYLIKKFKFSHPIDDNLQLNDRGQFGLSLQ 508          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP4AL_PIG (Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus scrofa GN=CYP4A21 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 48/177 (27.12%), Postives = 85/177 (48.02%), Query Frame = -2
Query:  176 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSENFGIVIKKK 706
            W +  L  +P+  ++ +EE+  ++G  + +   HL ++ Y    +KE  RL+P +P +    +       G ++P    L L+++ +H +PQ+W NP EF P RF             ++  ++PF  G R C G   A   +  V+A  L  FE   P  +++ +    GIV+K K
Sbjct:  326 WVLYALASNPEHQQRCREEIQGLLGDGTSITWDHLDQMPYTTMCIKEALRLYPPVPSVGRELSKPITFPDGRSLPAGIILSLSIYGLHHNPQVWPNPEEFDPSRFAPGSAR-------HSHAFMPFSGGSRNCIGKQFAMNEMKVVVALTLLRFEL-APDPSRIPVPIQ-GIVLKSK 493          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2A3_RAT (Cytochrome P450 2A3 OS=Rattus norvegicus GN=Cyp2a3 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 43/154 (27.92%), Postives = 81/154 (52.60%), Query Frame = -2
Query:  230 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 691
            LM+HP +  KV EE+ +V+G +   +     K+ Y +AV+ E  R    +P+ + RR ++      + +PK T +   + ++ +DP+ + NP +F P+ FL+   + K      +  ++PF  G+R C G  LA   L   L +++ +F ++ P
Sbjct:  317 LMKHPDIEAKVHEEIDRVIGRNRQAKYEDRMKMPYTEAVIHEIQRFADMIPMGLARRVTKDTKFREFLLPKGTEVFPMLGSVLKDPKFFSNPNDFNPKHFLDDKGQFK-----KSDAFVPFSIGKRYCFGEGLARMELFLFLTNIMQNFCFKSP 465          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CC44_CAEEL (Probable cytochrome P450 CYP44 OS=Caenorhabditis elegans GN=cyp-44A1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 52/156 (33.33%), Postives = 83/156 (53.21%), Query Frame = -2
Query:  242 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLW-DNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE 706
            + +  L  HP+ +K++Q+E+          E+    KL +L A +KETFR+ P +   V R   ++  + GY +P  T + +N   + R   L+ D+P EF+P+R+L    E       + F YLPFG G RMCAG   AE+ L+  LA L  +++
Sbjct:  321 YNLYNLATHPEALKEIQKEIK---------EDPASSKLTFLRACIKETFRMFP-IGTEVSRVTQKNLILSGYEVPAGTAVDINTNVLMRHEVLFSDSPREFKPQRWLEKSKEV------HPFAYLPFGFGPRMCAGRRFAEQDLLTSLAKLCGNYD 460          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: C6A21_DROME (Probable cytochrome P450 6a21 OS=Drosophila melanogaster GN=Cyp6a21 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 52/175 (29.71%), Postives = 89/175 (50.86%), Query Frame = -2
Query:  200 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLK---YLDAVVKETFRLHPALPLLVPRRASESGSIGG---YTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEN 706
            + + EL Q+  +  +V++E  +V+  + C  E +   +K   YLD VV ET RL+  LP+L  R   E   + G   Y I K   +++   A+HRD +L+ NP  F P+ F    V+ +     ++ ++LPFG G R C G+   +      LA L+  F++ +   T + ++ N
Sbjct:  319 FALYELAQNQDIQNRVRKECQEVI--EKCNGELNYESMKDLVYLDQVVSETLRLYTVLPVL-NRECLEDYEVPGHPKYVIKKGMPVLIPCGAMHRDEKLYANPNTFNPDNFSPERVKER-----DSVEWLPFGDGPRNCIGMRFGQMQARIGLALLIKDFKFSVCEKTTIPMTYN 485          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CY250_MOUSE (Cytochrome P450 2C50 OS=Mus musculus GN=Cyp2c50 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 49/152 (32.24%), Postives = 81/152 (53.29%), Query Frame = -2
Query:  245 LMQHPQVMKKVQEELAQVVGM--DSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            L+++P V  KVQEE+  V+G     C+++    ++ Y DA++ E  R    +P  +P   +       Y IPK T ++ ++ ++ RD + + NP +F P  FL+  G   K DY      ++PF +G+R+CAG  LA   L   L S+L +F
Sbjct:  313 LLKYPHVTAKVQEEIEHVIGKHRSPCMQD--RSRMPYTDAMIHEVQRFIDLVPNSLPHEVTCDIKFRNYFIPKGTNVITSLSSVLRDSKEFPNPEKFDPGHFLDENGKFKKSDY------FMPFSTGKRICAGEGLARMELFLFLTSILQNF 456          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP6A9_DROME (Cytochrome P450 6a9 OS=Drosophila melanogaster GN=Cyp6a9 PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 3.725e-14
Identity = 57/189 (30.16%), Postives = 94/189 (49.74%), Query Frame = -2
Query:  152 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPK-LKYLDAVVKETFRLHPALPLLVPRRASESGSIGG---YTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSENFGIVIKKKEPLIAIPT 706
            + + EL QH  +  +V++E  +V+G  +    +   K + YLD V+ ET RL+  LP+L  R   E   + G   Y I K   +++   A+HRD +L+ NP  F P+ F    V+ +     ++ ++LPFG G R C G+   +      LA L++ F++ +   T +       IV  KK  LI+  T
Sbjct:  319 FALYELAQHQDIQDRVRKECQEVIGKYNGEITYESMKDMVYLDQVISETLRLYTVLPVL-NRECLEDYEVPGHPKYVIKKGMPVLIPCGAMHRDEKLYANPNTFNPDNFSPERVKER-----DSVEWLPFGDGPRNCIGMRFGQMQARSGLALLINRFKFSVCEQTTI------PIVYSKKTFLISSET 495          
The following BLAST results are available for this feature:
BLAST of CF832506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP2E1_PIG2.184e-1432.89Cytochrome P450 2E1 OS=Sus scrofa GN=CYP2E1 PE=2 S... [more]
CP2C2_RABIT2.184e-1431.87Cytochrome P450 2C2 OS=Oryctolagus cuniculus GN=CY... [more]
CP2A7_HUMAN2.184e-1428.86Cytochrome P450 2A7 OS=Homo sapiens GN=CYP2A7 PE=2... [more]
C513D_DICDI2.184e-1434.04Probable cytochrome P450 513D1 OS=Dictyostelium di... [more]
CP4AL_PIG2.852e-1427.12Taurochenodeoxycholic 6 alpha-hydroxylase OS=Sus s... [more]
CP2A3_RAT2.852e-1427.92Cytochrome P450 2A3 OS=Rattus norvegicus GN=Cyp2a3... [more]
CC44_CAEEL2.852e-1433.33Probable cytochrome P450 CYP44 OS=Caenorhabditis e... [more]
C6A21_DROME2.852e-1429.71Probable cytochrome P450 6a21 OS=Drosophila melano... [more]
CY250_MOUSE3.725e-1432.24Cytochrome P450 2C50 OS=Mus musculus GN=Cyp2c50 PE... [more]
CP6A9_DROME3.725e-1430.16Cytochrome P450 6a9 OS=Drosophila melanogaster GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832506 ID=CF832506; Name=CF832506; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTGACATAAAAATAGCAACGGAGGACTTTTATTAAAATATTAT
ATTACGATTGAACTTGAAATAACATATAAATCTTCCGATACTCACAAAAT
CATCACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTG
GTGTTGGAATAGCAATCAAAGGCTCTTTTTTCTTAATGACAATCCCAAAA
TTTTCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGA
GTGCAATAACGAAGCCAAAACAAACATCAGCATCCTCTCAGCTAGAGGAA
TCCCAGCACACATTCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTG
TTACCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTC
GGGTCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAG
CCCAAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCA
ATGCTGCCACTCTCGCTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGG
ATGCAGACGAAATGTTTCTTTCACCACAGCATCTAAATATTTCAATTTAG
GCAAATGAAATTCTTCAACACAACTGTCCATGCCCACAACTTGAGCTAAT
TCTTCCTGAACTTTCTTCATTACTTGTGGATGCTGCATCAACTCTGCCAT
TGTCCAT
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