CF832506

Overview
NameCF832506
Unique NameCF832506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP4AB_HUMAN (Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 45/164 (27.44%), Postives = 80/164 (48.78%), Query Frame = -2
Query:  215 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL 706
            W +  L  HP+  ++ +EE+  ++G  + +   HL ++ Y    +KE  RL+P +P +    ++      G ++PK   ++L+++ +H +P++W NP  F P RF     +       ++  +LPF  G R C G   A   L    A  L  FE  LP  T++
Sbjct:  332 WILYALATHPKHQERCREEIHSLLGDGASITWNHLDQMPYTTMCIKEALRLYPPVPGIGRELSTPVTFPDGRSLPKGIMVLLSIYGLHHNPKVWPNPEVFDPFRFAPGSAQ-------HSHAFLPFSGGSRNCIGKQFAMNELKVATALTLLRFEL-LPDPTRI 487          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2E1_RAT (Cytochrome P450 2E1 OS=Rattus norvegicus GN=Cyp2e1 PE=1 SV=4)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 47/149 (31.54%), Postives = 78/149 (52.35%), Query Frame = -2
Query:  245 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            LM++P++ +K+ EE+ +V+G            + Y+DAVV E  R    +P  +P  A+      GY IPK T ++  + ++  D   + +P +F+PE FLN     KF YS     +  F +G+R+C G  LA   L  +L+++L  F
Sbjct:  315 LMKYPEIEEKLHEEIDRVIGPSRVPAVRDRLDMPYMDAVVHEIQRFINLVPSNLPHEATRDTVFQGYVIPKGTVVIPTLDSLLYDSHEFPDPEKFKPEHFLN--ENGKFKYSD---YFKAFSAGKRVCVGEGLARMELFLLLSAILQHF 458          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2B3_RAT (Cytochrome P450 2B3 OS=Rattus norvegicus GN=Cyp2b3 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 45/155 (29.03%), Postives = 77/155 (49.68%), Query Frame = -2
Query:  230 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 691
            ++++P V +KVQ+E+ QV+G           K+ Y +AV+ E  R     P+ +P R ++     GY +PK+T +   + +   DPQ ++ P  F PE FL+  G   K +       ++PF  G+RMC G  +A   L     ++L ++    P
Sbjct:  314 MLKYPHVAEKVQKEIDQVIGSQRVPTLDDRSKMPYTEAVIHEIQRFSDVSPMGLPCRITKDTLFRGYLLPKNTEVYFILSSALHDPQYFEQPDTFNPEHFLDANGALKKCE------AFMPFSIGKRMCLGEGIARSELFLFFTTILQNYSVSSP 462          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP26A_HUMAN (Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 49/158 (31.01%), Postives = 80/158 (50.63%), Query Frame = -2
Query:  224 HPQVMKKVQEELAQV-----VGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG 682
            +P V++KV+EEL           D+ ++   L +LKY+  V+KET RL+P +P    R A ++  + GY IPK   ++ ++   H   +++ N  EF P+RF+    E       + F ++PFG G R C G   A+ +L      L    +W+L  G
Sbjct:  319 YPHVLQKVREELKSKGLLCKSNQDNKLDMEILEQLKYIGCVIKETLRLNPPVPGGF-RVALKTFELNGYQIPKGWNVIYSICDTHDVAEIFTNKEEFNPDRFMLPHPED-----ASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLNG 470          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP255_RAT (Cytochrome P450 2C55 OS=Rattus norvegicus GN=Cyp2c55 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.354e-14
Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = -2
Query:  218 LMQHPQVMKKVQEELAQVVGMDS--CVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTK 691
            L++H +V  KVQEE+  V+G     C+++    ++ Y DA+V E  R    +P  VP  A+ +     Y IPK T L+ ++ ++  D + + NP  F P  FL+  G   K DY      ++PF +G+RMC G  LA   L  +L +++ +F  +    TK
Sbjct:  313 LLKHTEVTAKVQEEIDHVIGRHRRPCMQD--RTRMPYTDAMVHEIQRYINLIPNNVPHAATCNVRFRNYVIPKGTDLVTSLTSVLHDDKEFPNPEVFDPGHFLDENGNFKKSDY------FMPFSTGKRMCVGEALARMELFLLLTTIVQNFNLKSFVDTK 465          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: THAS_MACFA (Thromboxane-A synthase OS=Macaca fascicularis GN=TBXAS1 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 44/129 (34.11%), Postives = 65/129 (50.39%), Query Frame = -2
Query:  209 LKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNL 595
            L YLD V+ ET R++P       R A++   + G  IP    L + V A+H DP+ W +P  F PERF      ++       F YLPFG+G R C G+ L    +   L  +LH F+++    T++ L
Sbjct:  390 LPYLDMVIAETLRMYPPA-FRFTREAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSPETFNPERF-----TAEAQQQHRPFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFQFQACPETQVPL 512          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP137_MYCTU (Putative cytochrome P450 137 OS=Mycobacterium tuberculosis GN=cyp137 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 48/156 (30.77%), Postives = 81/156 (51.92%), Query Frame = -2
Query:  239 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEW 706
            W    L+ HP  +++V+   A+ VG              +  AV+ ET R+ P  PL   R A++  +IGGY +   T +++++ AI+R  +++++P EFRPERFL    ++        + ++PFG G + C G   + R L+ VL  LL   E+
Sbjct:  312 WAFDLLLHHPDALRRVR---AEAVGGGEA----------FTTAVINETLRVRPPAPLTA-RVAAQPLTIGGYRVEAGTRIVVHIIAINRSAEVYEHPHEFRPERFLGTRPQT--------YAWVPFGGGVKRCLGANFSMRELITVLHVLLREGEF 445          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP135_DROME (Probable cytochrome P450 313a5 OS=Drosophila melanogaster GN=Cyp313a5 PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 50/148 (33.78%), Postives = 74/148 (50.00%), Query Frame = -2
Query:  245 PQVMKKVQEELAQVVGMDSCVEEFH--LPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLE-FRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 679
            P+    V EELA+V       E  H  L KL  LD V+ ET RL PA+PLL+ + +       G+ IP+  TLM++++  HR+  +W      F P+ FL     ++  YS     YLPF  G++ C G  L+       LA +L ++
Sbjct:  312 PKYQDNVFEELAEVFPSGGEFEASHADLEKLVKLDRVLHETMRLIPAVPLLIRQTSHSIQLSNGFYIPEGVTLMIDIFHTHRNKDIWGPQANAFNPDNFLPENKRARPPYS-----YLPFSKGKKTCLGWKLSLISAKLALAKILRNY 454          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: C518A_DICDI (Probable cytochrome P450 518A1 OS=Dictyostelium discoideum GN=cyp518a1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 50/182 (27.47%), Postives = 92/182 (50.55%), Query Frame = -2
Query:  173 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEF-HLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYT--IPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE-WELPAGTKLNLSENFGIVIKKKE 706
            W +  ++ +     K+  EL   +   + + +  +  +    +A +KE  RL+P +P  VPR+ ++S  I G +  IPK T ++ ++++I RD   WD+P +F+PERFL        D   ++  Y P+G G + C G+  ++  L   L++L+ +F+   L   +K+     FG   K  E
Sbjct:  311 WFILTMVNNLDYQDKIYNELKSTLETTTAMIKLSNRNQTPLFNAALKEVLRLYPPVPFGVPRQVNQSFEINGGSLKIPKGTQIIQSLYSIFRDENYWDSPDQFKPERFL--------DQDSHSNNYFPYGIGVKNCIGMGFSQDELYISLSNLVLNFKLLPLIENSKICDKPIFGFSFKPNE 484          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: C5133_DICDI (Probable cytochrome P450 513A3 OS=Dictyostelium discoideum GN=cyp513a3 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 47/136 (34.56%), Postives = 72/136 (52.94%), Query Frame = -2
Query:  191 LKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGT-KLNLSENFGI 595
            L Y+  ++KETFR HP   L +P   +E   I GY I   T ++ N+++ HR  +++ +P EF PERF           S  N   + FG G R C G  LAE  +  ++A+LL+ +++  P  + KLN    FG+
Sbjct:  351 LPYISMIIKETFRKHPIALLGLPHVTTEDVEIDGYKIEAGTYIIQNIFSSHRSDKIFQSPNEFIPERFFE---------SSQNQGLIHFGLGVRDCVGKSLAECEIFTLIATLLNRYQFINPNNSKKLNDIGTFGL 477          
The following BLAST results are available for this feature:
BLAST of CF832506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP4AB_HUMAN6.354e-1427.44Cytochrome P450 4A11 OS=Homo sapiens GN=CYP4A11 PE... [more]
CP2E1_RAT6.354e-1431.54Cytochrome P450 2E1 OS=Rattus norvegicus GN=Cyp2e1... [more]
CP2B3_RAT6.354e-1429.03Cytochrome P450 2B3 OS=Rattus norvegicus GN=Cyp2b3... [more]
CP26A_HUMAN6.354e-1431.01Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE... [more]
CP255_RAT6.354e-1432.30Cytochrome P450 2C55 OS=Rattus norvegicus GN=Cyp2c... [more]
THAS_MACFA8.298e-1434.11Thromboxane-A synthase OS=Macaca fascicularis GN=T... [more]
CP137_MYCTU8.298e-1430.77Putative cytochrome P450 137 OS=Mycobacterium tube... [more]
CP135_DROME8.298e-1433.78Probable cytochrome P450 313a5 OS=Drosophila melan... [more]
C518A_DICDI8.298e-1427.47Probable cytochrome P450 518A1 OS=Dictyostelium di... [more]
C5133_DICDI8.298e-1434.56Probable cytochrome P450 513A3 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832506 ID=CF832506; Name=CF832506; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTGACATAAAAATAGCAACGGAGGACTTTTATTAAAATATTAT
ATTACGATTGAACTTGAAATAACATATAAATCTTCCGATACTCACAAAAT
CATCACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTG
GTGTTGGAATAGCAATCAAAGGCTCTTTTTTCTTAATGACAATCCCAAAA
TTTTCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGA
GTGCAATAACGAAGCCAAAACAAACATCAGCATCCTCTCAGCTAGAGGAA
TCCCAGCACACATTCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTG
TTACCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTC
GGGTCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAG
CCCAAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCA
ATGCTGCCACTCTCGCTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGG
ATGCAGACGAAATGTTTCTTTCACCACAGCATCTAAATATTTCAATTTAG
GCAAATGAAATTCTTCAACACAACTGTCCATGCCCACAACTTGAGCTAAT
TCTTCCTGAACTTTCTTCATTACTTGTGGATGCTGCATCAACTCTGCCAT
TGTCCAT
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