CF832506

Overview
NameCF832506
Unique NameCF832506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2CL_CANFA (Cytochrome P450 2C21 (Fragment) OS=Canis familiaris GN=CYP2C21 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 50/152 (32.89%), Postives = 80/152 (52.63%), Query Frame = -2
Query:  245 LMQHPQVMKKVQEELAQVVGM--DSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            L++HP V  KVQEE+ +VVG     C+++     + Y DAVV E  R    +P  +P   ++      Y IPK TT++ ++ ++  D + + NP +F P  FL+  G   K DY      ++ F +G+R+C G  LA   L  +L ++L  F
Sbjct:  310 LLKHPDVTAKVQEEIHRVVGRHRSPCMQDRSC--MPYTDAVVHEIQRYIDLVPNNLPHSVTQDIKFREYLIPKGTTILTSLTSVLHDEKGFPNPDQFDPGHFLDENGSFKKSDY------FMAFSAGKRVCVGEGLARMELFLLLTNILQHF 453          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2A8_MESAU (Cytochrome P450 2A8 OS=Mesocricetus auratus GN=CYP2A8 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 46/155 (29.68%), Postives = 84/155 (54.19%), Query Frame = -2
Query:  230 LMQHPQVMKKVQEELAQVVGMDSCVE-EFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 691
            LM++P +  K+ EE+ QV+G +   + E HL K+ Y +AV+ E  R    +PL +PR  ++      + IPK T +   + ++ +DP+ + NP +F P+ F     + K  +  +N  ++PF  G+R C G  LA+  L     +++ +F ++ P
Sbjct:  317 LMKYPHIAAKMHEEIDQVIGRNRQPKYEDHL-KMPYTEAVIYEIQRFVDVVPLGLPRSTTKDIKFRDFLIPKGTDVFPVLSSVLKDPKFFSNPNDFNPQHF----SDDKGQFKKSN-AFMPFSVGKRYCFGESLAKMELFIFFTTIMQNFCFKSP 465          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP26A_MOUSE (Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 48/158 (30.38%), Postives = 79/158 (50.00%), Query Frame = -2
Query:  224 HPQVMKKVQEELAQV-----VGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG 682
            +P V++KV+EE+           D+ ++   L +LKY+  V+KET RL+P +P    R A ++  + GY IPK   ++ ++   H    ++ N  EF P+RF+    E       + F ++PFG G R C G   A+ +L      L    +W+L  G
Sbjct:  319 YPHVLQKVREEIKSKGLLCKSNQDNKLDMETLEQLKYIGCVIKETLRLNPPVPGGF-RVALKTFELNGYQIPKGWNVIYSICDTHDVADIFTNKEEFNPDRFIVPHPED-----ASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLNG 470          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP255_MOUSE (Cytochrome P450 2C55 OS=Mus musculus GN=Cyp2c55 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 52/161 (32.30%), Postives = 82/161 (50.93%), Query Frame = -2
Query:  218 LMQHPQVMKKVQEELAQVVGM--DSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTK 691
            L++H +V  KVQ E+  V+G     C+++    ++ Y DA+V E  R    +P  VP  A+ +     Y IPK T L+ ++ ++  D + + NP  F P  FL+  G   K DY      ++PF  G+RMC G  LA   L  +L ++L +F  +    TK
Sbjct:  313 LLKHTEVTAKVQAEIDHVIGRHRSPCMQD--RTRMPYTDAMVHEIQRYIDLIPNNVPHAATCNVRFRSYFIPKGTELVTSLTSVLHDDKEFPNPEVFDPGHFLDENGNFKKSDY------FMPFSIGKRMCVGEALARTELFLILTTILQNFNLKSLVDTK 465          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: C519B_DICDI (Probable cytochrome P450 519B1 OS=Dictyostelium discoideum GN=cyp519b1 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 58/204 (28.43%), Postives = 96/204 (47.06%), Query Frame = -2
Query:  173 WTMAELMQHPQVMKKVQEELAQVVGMD-SCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIG-GYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLN---------------VGVESKFDYS-GNNFQYL--------PFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSENFGIVIKKKE 706
            W    L+ +P V KK  +EL  VVG D   V   H+    Y  +++KE FR+    PL +PR + +   +  G  IPK T ++LN++ +     L   P +F+PER++N               V  ++  D S  +N ++         PF  G R C G+ +A+  +  V +++L +FE        ++ +E FG+ I  KE
Sbjct:  300 WFCLYLINNPDVQKKAYQELISVVGKDCKFVTSNHIENCPYFISIIKEVFRIRSPGPLGLPRISIDDTYLSNGMFIPKGTQILLNIFGMGN--LLVSEPDQFKPERWINYKNQQQQKQQQQQQQVNNKNSIDSSESSNLEFFDDLEKVSNPFSLGPRNCVGMAIAKSSIYSVCSNILLNFELSSINNQIIDDNEVFGVSINPKE 501          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: C5084_DICDI (Probable cytochrome P450 508A4 OS=Dictyostelium discoideum GN=cyp508a4 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 53/183 (28.96%), Postives = 89/183 (48.63%), Query Frame = -2
Query:  176 LMQHPQVMKKVQEELAQV---VGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGG-YTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGV-------ESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSENFGIVIKKK 691
            +  +P++  KV +E+      +G D  VE      L Y+ AV+KET R  P  P  VPR      +I   Y IPK   +++N  +I  + + + N  +F P RFL           ES F+   +N  ++PF  G R C G+  A+  L    A+++ +F  +   G K++ + ++G+ +K K
Sbjct:  311 MANYPEIQDKVHQEVKSYLKQIGKDK-VELNDRQSLPYVVAVIKETLRFKPVTPFGVPRSCVNEITIDEKYFIPKGAQVIINYPSIFENEKYFKNANQFDPSRFLQTTTTNTASNEESSFN---SNLAFIPFSIGPRNCVGMQFAQDELFLAFANIVLNFTIKSVDGKKIDETISYGVTLKPK 489          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: C13A8_CAEEL (Putative cytochrome P450 CYP13A8 OS=Caenorhabditis elegans GN=cyp-13A8 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13
Identity = 48/160 (30.00%), Postives = 80/160 (50.00%), Query Frame = -2
Query:  215 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPL-EFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL 691
            L  +P++  K+Q+E+ +    D    +  L KLKY+D V+KE+ RL P       RR   +  IG   +     +M++ W +H D  +W N + EF+PER+ +     +         YL FG+G R+C G+  A      +L+ +L  + +E  A T+L
Sbjct:  336 LALNPKIQSKLQDEVDKECPNDEITFD-QLSKLKYMDNVIKESLRLFPFASFANSRRCMRNTVIGEQIVEAGVDVMIDTWTLHHDKNVWGNDVEEFKPERWDSPLTPQQ--------AYLSFGAGPRVCLGMRFALLEQKGLLSHILKKYTFETNAKTQL 486          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: THAS_HUMAN (Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = -2
Query:  209 LKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNL 595
            L YLD V+ ET R++P       R A++   + G  IP    L + V A+H DP+ W +P  F PERF     E++  +    F YLPFG+G R C G+ L    +   L  +LH F ++    T++ L
Sbjct:  390 LPYLDMVIAETLRMYPPA-FRFTREAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSPETFNPERFT---AEARQQH--RPFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFRFQACPETQVPL 512          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP51_MYCTU (Lanosterol 14-alpha demethylase OS=Mycobacterium tuberculosis GN=cyp51 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 49/179 (27.37%), Postives = 89/179 (49.72%), Query Frame = -2
Query:  170 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSENFGIVIKKKEP 706
            WT+ ELM+H      V +EL ++ G    V    L ++  L+ V+KET RLHP L +L+ R A     + G+ I +   +  +    +R P+ + +P +F P R+     E       N + ++PFG+GR  C G   A   +  + + LL  +E+E+    +   +++  +V++  +P
Sbjct:  267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLL----NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQP 440          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP51_MYCBO (Lanosterol 14-alpha demethylase OS=Mycobacterium bovis GN=cyp51 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 49/179 (27.37%), Postives = 89/179 (49.72%), Query Frame = -2
Query:  170 WTMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSENFGIVIKKKEP 706
            WT+ ELM+H      V +EL ++ G    V    L ++  L+ V+KET RLHP L +L+ R A     + G+ I +   +  +    +R P+ + +P +F P R+     E       N + ++PFG+GR  C G   A   +  + + LL  +E+E+    +   +++  +V++  +P
Sbjct:  267 WTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETLRLHPPLIILM-RVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLL----NRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPESYRNDHSKMVVQLAQP 440          
The following BLAST results are available for this feature:
BLAST of CF832506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CP2CL_CANFA1.415e-1332.89Cytochrome P450 2C21 (Fragment) OS=Canis familiari... [more]
CP2A8_MESAU1.415e-1329.68Cytochrome P450 2A8 OS=Mesocricetus auratus GN=CYP... [more]
CP26A_MOUSE1.415e-1330.38Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE... [more]
CP255_MOUSE1.415e-1332.30Cytochrome P450 2C55 OS=Mus musculus GN=Cyp2c55 PE... [more]
C519B_DICDI1.415e-1328.43Probable cytochrome P450 519B1 OS=Dictyostelium di... [more]
C5084_DICDI1.415e-1328.96Probable cytochrome P450 508A4 OS=Dictyostelium di... [more]
C13A8_CAEEL1.415e-1330.00Putative cytochrome P450 CYP13A8 OS=Caenorhabditis... [more]
THAS_HUMAN1.849e-1334.88Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 P... [more]
CP51_MYCTU1.849e-1327.37Lanosterol 14-alpha demethylase OS=Mycobacterium t... [more]
CP51_MYCBO1.849e-1327.37Lanosterol 14-alpha demethylase OS=Mycobacterium b... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832506 ID=CF832506; Name=CF832506; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTGACATAAAAATAGCAACGGAGGACTTTTATTAAAATATTAT
ATTACGATTGAACTTGAAATAACATATAAATCTTCCGATACTCACAAAAT
CATCACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTG
GTGTTGGAATAGCAATCAAAGGCTCTTTTTTCTTAATGACAATCCCAAAA
TTTTCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGA
GTGCAATAACGAAGCCAAAACAAACATCAGCATCCTCTCAGCTAGAGGAA
TCCCAGCACACATTCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTG
TTACCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTC
GGGTCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAG
CCCAAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCA
ATGCTGCCACTCTCGCTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGG
ATGCAGACGAAATGTTTCTTTCACCACAGCATCTAAATATTTCAATTTAG
GCAAATGAAATTCTTCAACACAACTGTCCATGCCCACAACTTGAGCTAAT
TCTTCCTGAACTTTCTTCATTACTTGTGGATGCTGCATCAACTCTGCCAT
TGTCCAT
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