CF832506

Overview
NameCF832506
Unique NameCF832506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10467 contig Csv1_Contig10467:1..694. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: C12C1_DROME (Probable cytochrome P450 12c1, mitochondrial OS=Drosophila melanogaster GN=Cyp12c1 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.849e-13
Identity = 52/166 (31.33%), Postives = 86/166 (51.81%), Query Frame = -2
Query:  218 MAELMQHPQVMKKVQEE-LAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNN----FQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTK 700
            +  L ++P+  ++++EE L+++  + S      +  L YL AV+KE+ RL+P +     R A     + GY IPK T L++    + +D +L+    EF PER+L    + K D   N     F YLPFG G RMC G  + +  +   +A+L+ +F  E    T+
Sbjct:  336 LLNLAKNPEKQQRLREEVLSKLTSLHSEFTVEDMKSLPYLRAVIKESLRLYP-VTFGNARSAGADVVLDGYRIPKGTKLLMTNSFLLKDDRLYPRAKEFIPERWLRRKDDDKSDVLMNKDLNAFIYLPFGFGPRMCVGKRIVDLEMELTVANLVRNFHIEYNYSTE 500          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2CB_RAT (Cytochrome P450 2C11 OS=Rattus norvegicus GN=Cyp2c11 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13
Identity = 48/150 (32.00%), Postives = 77/150 (51.33%), Query Frame = -2
Query:  245 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            L++H  V  KVQEE+ +V+G +         ++ Y DAVV E  R    +P  +P   +       Y IPK T +++++ +I  D + + NP +F P  FL+  G   K DY      ++PF +G+R+CAG  LA   L     ++L +F
Sbjct:  313 LLKHVDVTAKVQEEIERVIGRNRSPCMKDRSQMPYTDAVVHEIQRYIDLVPTNLPHLVTRDIKFRNYFIPKGTNVIVSLSSILHDDKEFPNPEKFDPGHFLDERGNFKKSDY------FMPFSAGKRICAGEALARTELFLFFTTILQNF 456          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2B5_RABIT (Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CYP2B5 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13
Identity = 44/154 (28.57%), Postives = 74/154 (48.05%), Query Frame = -2
Query:  230 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 691
            ++++P V ++VQ+E+ QV+G           K+ Y DAV+ E  RL   +P   P   ++     GY IPK+T +   + +   DP+ ++ P  F P  FL+     K      N  ++PF  G+R+C G  +A   L     ++L +F    P
Sbjct:  314 MLKYPHVTERVQKEIEQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLVPFGAPHMVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDADGALK-----RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASP 462          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: C12A2_MUSDO (Cytochrome P450 CYP12A2 OS=Musca domestica GN=CYP12A2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13
Identity = 51/160 (31.87%), Postives = 81/160 (50.62%), Query Frame = -2
Query:  236 LMQHPQVMKKVQEELAQVVGM-DSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDY-------SGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWE 691
            L ++P+  KK++EE+ Q++   DS   E     + YL A +KE+ R++P L +   R  +    I GY +PK T + +N   + +D   +    EF PER+L    E++          + + F YLPFG G R C G  +AE  L   +A L+ +F  E
Sbjct:  349 LAKNPEKQKKLREEIMQLLPQKDSEFNEAVFKNMPYLRACIKESLRVYP-LTVGNARTQANDVVISGYRVPKGTLISMNSVTLIKDDAHYPRASEFLPERWLRASKENEKSAECPHALKASSPFVYLPFGFGSRSCIGRRIAEMELELGIARLIRNFHVE 507          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP6J1_BLAGE (Cytochrome P450 6j1 OS=Blattella germanica GN=CYP6J1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 46/156 (29.49%), Postives = 74/156 (47.44%), Query Frame = -2
Query:  242 WTMAELMQHPQVMKKVQEELAQVVGMDSC-VEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE 706
            + + EL  H  +    + E+  V+      V  + +  +KYLD VV ET R +PA+P L  R   +        +P  T + + V+A+H D + + +P +F PERF       K   +  +F Y+PFG G R C G+      +   L  +L +FE
Sbjct:  316 FALYELSVHQDIQTTARTEIKDVLEHHKKKVTYYSIKDMKYLDMVVNETLRKYPAIPFLDRRCQEDYPLTQDLMLPAGTGVYIPVYALHHDSKYFPSPAKFDPERF-----SEKNKQNIPHFAYMPFGEGPRNCIGMRFGSMQVKAALIHILSNFE 466          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP2E1_MACFA (Cytochrome P450 2E1 (Fragment) OS=Macaca fascicularis GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 46/149 (30.87%), Postives = 78/149 (52.35%), Query Frame = -2
Query:  245 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            LM++P++ +K+ EE+ +V+G           ++ Y+ AVV E  R    +P  +P  A+      GY IPK T ++  + ++    Q + +P +F+PE    V    KF YS     + PF +G+R+CAG  LA   L  +L+++L  F
Sbjct:  271 LMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMHAVVHEIQRFITLVPSNLPHEATRDTIFRGYIIPKGTVIVPTLDSVLYHNQEFPDPEKFKPEHL--VDESGKFKYSD---YFKPFSAGKRVCAGEGLARMELFLLLSAILQHF 414          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP26C_HUMAN (Cytochrome P450 26C1 OS=Homo sapiens GN=CYP26C1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 56/176 (31.82%), Postives = 85/176 (48.30%), Query Frame = -2
Query:  233 LMQHPQVMKKVQEEL-AQVVGMD------------------SCVEEFHLP---KLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLE-FRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWEL 691
            L+QHP  + K++EEL AQ +G                     C  +  L    +L+Y+D VVKE  RL P +     R A  +  + GY IPK  ++M ++   H    ++ +P E F PERF     +S+   + + F Y+PFG G R C G  LA+ +L  +   L+ +  WEL
Sbjct:  312 LLQHPAAIAKIREELVAQGLGRACGCAPGAAGGSEGPPPDCGCEPDLSLAALGRLRYVDCVVKEVLRLLPPVSGGY-RTALRTFELDGYQIPKGWSVMYSIRDTHETAAVYRSPPEGFDPERFGAAREDSRG--ASSRFHYIPFGGGARSCLGQELAQAVLQLLAVELVRTARWEL 484          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: C49A1_DROME (Probable cytochrome P450 49a1 OS=Drosophila melanogaster GN=Cyp49a1 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 51/165 (30.91%), Postives = 80/165 (48.48%), Query Frame = -2
Query:  224 TMAELMQHPQVMKKVQEELAQVVG-MDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNN----FQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG 703
            T+ +L ++P   KK+ +EL +V    ++ + +  L ++ YL A VKET R+ P + +   R       I GY +PK T ++     +  DP  +  P  F PER+L    ++      N     F  LPFG GRRMC G   AE  L  +LA +   ++    +G
Sbjct:  401 TIYQLAKNPDKQKKLFDELQKVFPHREADINQNVLEQMPYLRACVKETLRMRPVV-IANGRSLQSDAVINGYHVPKGTHVIFPHLVVSNDPAYFPEPKRFLPERWLKQSTDAAGCPHANQKIHPFVSLPFGFGRRMCVGRRFAEIELHTLLAKIFRKYKVSYNSG 564          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: CP191_CARAU (Cytochrome P450 19 type 1 OS=Carassius auratus GN=cyp19a1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 50/149 (33.56%), Postives = 77/149 (51.68%), Query Frame = -2
Query:  245 LMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 691
            L Q+  V +++ +E+   +G +  VE   L KL  L+  +KE+ R HP +  ++ RRA E   I GY + K T L+LN+  +H+  + +  P EF  E F N  V S++        + PFG G R C G  +A  M   +L +LL  F
Sbjct:  320 LKQNSVVEEQIVQEIQSQIG-ERDVESADLQKLNVLERFIKESLRFHPVVDFIM-RRALEDDEIDGYRVAKGTNLILNIGRMHKS-EFFQKPNEFNLENFENT-VPSRY--------FQPFGCGPRACVGKHIAMVMTKAILVTLLSRF 456          
BLAST of CF832506 vs. ExPASy Swiss-Prot
Match: C11B1_HUMAN (Cytochrome P450 11B1, mitochondrial OS=Homo sapiens GN=CYP11B1 PE=1 SV=5)

HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13
Identity = 48/156 (30.77%), Postives = 82/156 (52.56%), Query Frame = -2
Query:  236 TMAELMQHPQVMKKVQEELAQVVGMDSCVEEFHLPKLKYLDAVVKETFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWE 703
            T+ EL ++P V + +++E        S   +    +L  L A +KET RL+P + L + R AS    +  Y IP  T + + ++++ R+P L+  P  + P+R+L++        SG NF ++PFG G R C G  LAE  ++ +L  +L   + E
Sbjct:  326 TLFELARNPNVQQALRQESLAAAASISEHPQKATTELPLLRAALKETLRLYP-VGLFLERVASSDLVLQNYHIPAGTLVRVFLYSLGRNPALFPRPERYNPQRWLDIRG------SGRNFYHVPFGFGMRQCLGRRLAEAEMLLLLHHVLKHLQVE 474          
The following BLAST results are available for this feature:
BLAST of CF832506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
C12C1_DROME1.849e-1331.33Probable cytochrome P450 12c1, mitochondrial OS=Dr... [more]
CP2CB_RAT2.414e-1332.00Cytochrome P450 2C11 OS=Rattus norvegicus GN=Cyp2c... [more]
CP2B5_RABIT2.414e-1328.57Cytochrome P450 2B5 OS=Oryctolagus cuniculus GN=CY... [more]
C12A2_MUSDO2.414e-1331.88Cytochrome P450 CYP12A2 OS=Musca domestica GN=CYP1... [more]
CP6J1_BLAGE3.153e-1329.49Cytochrome P450 6j1 OS=Blattella germanica GN=CYP6... [more]
CP2E1_MACFA3.153e-1330.87Cytochrome P450 2E1 (Fragment) OS=Macaca fascicula... [more]
CP26C_HUMAN3.153e-1331.82Cytochrome P450 26C1 OS=Homo sapiens GN=CYP26C1 PE... [more]
C49A1_DROME3.153e-1330.91Probable cytochrome P450 49a1 OS=Drosophila melano... [more]
CP191_CARAU4.118e-1333.56Cytochrome P450 19 type 1 OS=Carassius auratus GN=... [more]
C11B1_HUMAN4.118e-1330.77Cytochrome P450 11B1, mitochondrial OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832506 ID=CF832506; Name=CF832506; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTGACATAAAAATAGCAACGGAGGACTTTTATTAAAATATTAT
ATTACGATTGAACTTGAAATAACATATAAATCTTCCGATACTCACAAAAT
CATCACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTG
GTGTTGGAATAGCAATCAAAGGCTCTTTTTTCTTAATGACAATCCCAAAA
TTTTCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGA
GTGCAATAACGAAGCCAAAACAAACATCAGCATCCTCTCAGCTAGAGGAA
TCCCAGCACACATTCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTG
TTACCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTC
GGGTCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAG
CCCAAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCA
ATGCTGCCACTCTCGCTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGG
ATGCAGACGAAATGTTTCTTTCACCACAGCATCTAAATATTTCAATTTAG
GCAAATGAAATTCTTCAACACAACTGTCCATGCCCACAACTTGAGCTAAT
TCTTCCTGAACTTTCTTCATTACTTGTGGATGCTGCATCAACTCTGCCAT
TGTCCAT
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