CF832509

Overview
NameCF832509
Unique NameCF832509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: CYP7_YEAST (Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccharomyces cerevisiae GN=CPR7 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.318e-23
Identity = 76/202 (37.62%), Postives = 98/202 (48.51%), Query Frame = -1
Query:  163 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGE-KGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGE---------SIYGEK--------------FPDENFKLKHTGPGLLSMANAG-PDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGEXXXXXXXXLYN 690
            VY D+ I  KP GRIV  LF +  PKT ENF  LC G+ K   K  + L YKG+ FHR++ +FM+Q                      SIY +K              F DEN   +   P  L MAN G P+TN SQFFITT     L+G+H +FG+V+ G  VV  +E      +G P+S V ++D G         LYN
Sbjct:    7 VYLDISIDKKPIGRIVCKLFREKAPKTTENFYKLCAGDVKSPLKDQQYLSYKGNGFHRVVKNFMIQAGDIVFGTQKDSSSSSVGKGGCSIYADKEEVKTDDESFCYGNFEDENLG-EFVEPFTLGMANLGSPNTNNSQFFITTYAAPHLNGKHSIFGQVVHGKSVVRTIENCRVDSDGVPESDVRISDCGVWEKTMGVPLYN 207          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPIL1_CRYNE (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryptococcus neoformans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.641e-22
Identity = 62/147 (42.18%), Postives = 85/147 (57.82%), Query Frame = -1
Query:  253 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 690
            V FD  +     G   + L+    PKT  NF  L   E+G        +Y G  FHRIIP+FM+Q             SIYG++F DE + +L+  G G+L+MAN+GP+TNGSQFFIT   T +LDG+H +FG+V SGM  + ++EA
Sbjct:    9 VTFDTSV-----GSFTVELYTAHAPKTCNNFAKLA--ERG--------YYNGVIFHRIIPNFMIQGGDPTGTGRGGT-SIYGDRFADEIHPELRFVGAGILAMANSGPNTNGSQFFITCAPTPYLDGKHTIFGRVSSGMKTIQRLEA 139          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: CYP15_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizopus oryzae GN=cyp15 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 61/136 (44.85%), Postives = 80/136 (58.82%), Query Frame = -1
Query:  253 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 657
            +G I M LF  A PK  ENF           K+G   +Y    FHR+I  FM+Q            ESI+G+ F DE + + +H  P  +SMANAGP+TNGSQFFIT   T+WLD +H VFG+V +GMDVV+ +E+
Sbjct:  485 SGDIHMRLFPDAAPKAVENFTTHA-------KNG---YYDNLIFHRVIKGFMIQTGCPFGDGTGG-ESIWGDDFEDEFSREFRHDRPYTVSMANAGPNTNGSQFFITVAPTTWLDNKHSVFGRVTAGMDVVHSIES 609          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPWD1_MOUSE (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Mus musculus GN=Ppwd1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21
Identity = 64/142 (45.07%), Postives = 78/142 (54.93%), Query Frame = -1
Query:  259 DVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 681
            D  I     G I + LF    PKT ENF   C   +         +Y G TFHRII  FM+Q            ESI+G +F DE +  L+H  P  LSMANAG +TNGSQFFIT V T WLD +H VFG+V  GM+VV ++
Sbjct:  492 DSAIVHTSMGDIHIKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVSKGMEVVQRI 622          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPWD1_BOVIN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Bos taurus GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.389e-21
Identity = 64/142 (45.07%), Postives = 78/142 (54.93%), Query Frame = -1
Query:  259 DVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 681
            D  I     G I + LF    PKT ENF   C   +         +Y G TFHRII  FM+Q            ESI+G +F DE +  L+H  P  LSMANAG +TNGSQFFIT V T WLD +H VFG+V  GM+VV ++
Sbjct:  490 DSAIIHTSMGDIHIKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRI 620          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPWD1_PONAB (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Pongo abelii GN=PPWD1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 64/142 (45.07%), Postives = 77/142 (54.23%), Query Frame = -1
Query:  259 DVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 681
            D  I     G I   LF    PKT ENF   C   +         +Y G TFHRII  FM+Q            ESI+G +F DE +  L+H  P  LSMANAG +TNGSQFFIT V T WLD +H VFG+V  GM+VV ++
Sbjct:  492 DSAIIHTSMGDIHTKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRI 622          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPWD1_HUMAN (Peptidylprolyl isomerase domain and WD repeat-containing protein 1 OS=Homo sapiens GN=PPWD1 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 64/142 (45.07%), Postives = 77/142 (54.23%), Query Frame = -1
Query:  259 DVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 681
            D  I     G I   LF    PKT ENF   C   +         +Y G TFHRII  FM+Q            ESI+G +F DE +  L+H  P  LSMANAG +TNGSQFFIT V T WLD +H VFG+V  GM+VV ++
Sbjct:  492 DSAIIHTSMGDIHTKLFPVECPKTVENF---CVHSRNG-------YYNGHTFHRIIKGFMIQTGDPTGTGMGG-ESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRI 622          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPIL3_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhizopus oryzae GN=cyp4 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21
Identity = 63/133 (47.37%), Postives = 78/133 (58.65%), Query Frame = -1
Query:  274 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXG-----ESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMD 654
            G I + +F +AVPKTAENF ALC        SG   +Y  +TFHR IP FM+Q           G      SI+G+KF DE    LKH   G++SMAN+GP+TNGSQFFIT      LD ++ VFGKV+ G D
Sbjct:   10 GDIKIEVFCEAVPKTAENFLALCA-------SG---YYDNNTFHRNIPGFMIQVHEHLHTGDPTGTGKGGNSIWGKKFNDEIRSTLKHNSRGIVSMANSGPNTNGSQFFITYAKHPHLDTKYTVFGKVIDGAD 132          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: CYP9_SCHPO (Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosaccharomyces pombe GN=cyp9 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.836e-20
Identity = 56/134 (41.79%), Postives = 78/134 (58.21%), Query Frame = -1
Query:  256 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 654
            G I + L+ +  PK  +NF      E G        +Y  + FHRII +FM+Q            ESI+ + F DE +  LKH  P  +SMAN+GP+TNGSQFFITT  T WLDG+H +F +  +G+DVV+++E
Sbjct:  464 GDISIKLYPEEAPKAVQNFTT--HAENG--------YYDNTIFHRIIKNFMIQGGDPLGDGTGG-ESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKHTIFARAYAGLDVVHRIE 586          
BLAST of CF832509 vs. ExPASy Swiss-Prot
Match: PPIL2_RHIOR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhizopus oryzae GN=cyp14 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.452e-19
Identity = 61/135 (45.19%), Postives = 72/135 (53.33%), Query Frame = -1
Query:  253 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXGESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 654
            G I + LF    PKT  NF  L        K+G   +Y    FHR I  FM+Q            ESI+   FPDE    LKH   G+LSMAN G DTNGSQFFIT      LDG H VFGKV+ G+DV+ K+E+
Sbjct:  295 GNINVELFSDKKPKTCHNFIELA-------KTG---YYNDVIFHRNIKKFMIQGGDPTGTGKGG-ESIWKRYFPDEIKTTLKHDARGVLSMANRGKDTNGSQFFITYAAAPHLDGLHTVFGKVVGGLDVLSKLES 418          
The following BLAST results are available for this feature:
BLAST of CF832509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
CYP7_YEAST4.318e-2337.62Peptidyl-prolyl cis-trans isomerase CYP7 OS=Saccha... [more]
PPIL1_CRYNE1.641e-2242.18Peptidyl-prolyl cis-trans isomerase-like 1 OS=Cryp... [more]
CYP15_RHIOR2.799e-2244.85Peptidyl-prolyl cis-trans isomerase cyp15 OS=Rhizo... [more]
PPWD1_MOUSE1.389e-2145.07Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_BOVIN1.389e-2145.07Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_PONAB2.369e-2145.07Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPWD1_HUMAN2.369e-2145.07Peptidylprolyl isomerase domain and WD repeat-cont... [more]
PPIL3_RHIOR9.003e-2147.37Peptidyl-prolyl cis-trans isomerase-like 3 OS=Rhiz... [more]
CYP9_SCHPO5.836e-2041.79Peptidyl-prolyl cis-trans isomerase 9 OS=Schizosac... [more]
PPIL2_RHIOR6.452e-1945.19Peptidyl-prolyl cis-trans isomerase-like 2 OS=Rhiz... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01P13_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832509 ID=CF832509; Name=CF832509; organism=Citrus sinensis; type=EST; length=699bp
TTTTTTTTTTTTTTTCAGAGAAAAGGATCCCCTTAAAATGAAGCACCATC
TTGGCAAACAACCTAGGACATTTTAAAATGTCTATTACATGATAAATAGG
CAAATTATGAGTATCTTCATGAAGGTTGAAAAGACGAGAGGACTAAAAAG
GTGTATAGCGTAATTATATAATTATGGGGGAAATCACAGAGGAAGTTCAC
CGCTGTCTGCAACGACGACTTTGCTCTTCGGAGTGCCATTCTGCCTCCCT
TCAGCTTCAACCTTGTAAACTACATCCATCCCCGATAGCACCTTTCCAAA
TACAACATGCCTGCCATCCAACCAGCTAGTTGTCACAGTTGTAATGAAGA
ATTGTGAACCATTGGTGTCTGGACCAGCATTTGCCATTGACAAAAGCCCT
GGGCCAGTGTGCTTCAGTTTGAAATTTTCGTCAGGGAACTTCTCTCCATA
AATTGACTCTCCACCTCTTCCATCACCAAGAGTGAAATCACCTCCTTGAA
GCATAAAGCTGGGAATAATCCTATGGAACGTACTTCCCTTGTAGTGGAGT
GGCTTCCCGCTCTTGCCAATCCCTTTCTCCCCTGTGCACAAAGCTCGGAA
ATTTTCTGCAGTTTTAGGGACTGCCTTTCCAAAGAGACCCATTACAATAC
GTCCGGCAGGTTTTCCAGCAATCTCAACGTCAAAGTAAACTTTGTTTGT
back to top