CF832510

Overview
NameCF832510
Unique NameCF832510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.128e-46
Identity = 93/166 (56.02%), Postives = 112/166 (67.47%), Query Frame = 2
Query:    8 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 505
            KV+FD  + G   GRI   L+   VPKTAENFRALCTGEKG G       YKG  FHRIIP FM+Q            +SIYG KF DENF  KH   GLLSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V  GMD+V  +E+ G  +G P++++V+ ++GE
Sbjct:   23 KVFFDPAVNGTKIGRIEFELYDNVVPKTAENFRALCTGEKGWG-------YKGVPFHRIIPDFMIQGGDTDLTNGFGGKSIYGSKFADENFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTKGMDIVKAIESYGTASGKPRAEIVIEEAGE 181          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: CYP6_CAEEL (Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhabditis elegans GN=cyn-6 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.779e-46
Identity = 95/168 (56.55%), Postives = 117/168 (69.64%), Query Frame = 2
Query:    2 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSG 502
            T+KV+FD+EI G+P G+IV+GLFG+ VPKT +NF  L    +G G       Y GS FHR+I +FM+Q             SIYGE+F DENFKL+H GPG LSMANAG DTNGSQFFITT  TSWLDG+HVVFGK+L GMDVV ++EA  +  G  P   VV+A++G
Sbjct:   25 TDKVFFDMEIGGRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEG-------YVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKILEGMDVVREIEATPKGAGDRPIEDVVIANAG 185          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.630e-46
Identity = 96/169 (56.80%), Postives = 112/169 (66.27%), Query Frame = 2
Query:    2 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ-NGTPKSKVVVADSGE 505
            T KV+FDV I  K  GRIV+GLFGK VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKV+ GM VV+ +E +    +  P +   + +SG+
Sbjct:   37 TAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSIINSGK 198          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.630e-46
Identity = 97/169 (57.40%), Postives = 112/169 (66.27%), Query Frame = 2
Query:    2 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ-NGTPKSKVVVADSGE 505
            T KV+FDV I  K  GRIV+GLFGK VPKT ENF AL TGEKG G       YKGS FHR+I  FM+Q             SIYGE FPDENFKLKH G G +SMANAGPDTNGSQFFIT    +WLDG+HVVFGKVL GM VV+ +E +    +  P +   + +SG+
Sbjct:   37 TAKVFFDVRIGDKDVGRIVIGLFGKVVPKTVENFVALATGEKGYG-------YKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKVLDGMTVVHSIELQATDGHDRPFTDCSIVNSGK 198          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: CYP40_ARATH (Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabidopsis thaliana GN=CYP40 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.741e-46
Identity = 94/169 (55.62%), Postives = 114/169 (67.46%), Query Frame = 2
Query:    5 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 505
            +K + D+ I G+  GRIV+ L+   VPKTAENFR LCTGEKG+G  +G PLHYKG+ FHR+I  FM+Q            ESIYG KF DENF+LKH   G+LSMAN+GP+TNGSQFFITT  TS LDG+HVVFG+V  GM VV  +E     +   P   VV+ D GE
Sbjct:    4 SKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGE 172          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.056e-45
Identity = 93/168 (55.36%), Postives = 113/168 (67.26%), Query Frame = 2
Query:    2 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSG 502
            T KV+FD+E+  +P GRI++GLFGK VPKT ENF+ L  G     K G+   YKGSTFHR+I SFM+Q             SIYGE+FPDENFKLKH G G LSMANAGP+TNG+QFFITT    WLDG+HVVFGKV+ GM VV ++E  +      P   V +A+ G
Sbjct:   31 TEKVFFDIEVDEQPLGRIIIGLFGKTVPKTVENFKQLSIGTTL--KDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKVVEGMSVVRQIENMQTDSRDRPVKSVKIANCG 196          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: PPID_CANAL (Peptidyl-prolyl cis-trans isomerase D OS=Candida albicans GN=CPR6 PE=3 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 6.846e-45
Identity = 97/170 (57.06%), Postives = 113/170 (66.47%), Query Frame = 2
Query:   11 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIG-KSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXX---ESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 505
            VYFD+   GKP GR+V  L+   VPKTA NFR+LCTG+KGI  KSGKPL YK S FHR+I  FM Q               ESIYGEKF DENFKL H  P LLSMAN+GP+TNGSQFFITTV T  LDG+HVVFG+V+ G  +V ++E +E   N  P     +AD GE
Sbjct:    6 VYFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLERSEKGANDRPVEDWKIADCGE 175          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: CYP11_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizopus oryzae GN=cyp11 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.601e-44
Identity = 96/168 (57.14%), Postives = 112/168 (66.67%), Query Frame = 2
Query:    8 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEG-RQNGTPKSKVVVADSGE 505
            +V+FD+++ G   GRIV+ LF   VPKTAENFRALCTGEKGIGK S  PLHYKGS FHRII  FM Q            ESIYG  FPDE+F  KH   GLLSMAN GP+T  SQFFITT  T  LDG+HVVFG+V+SG +VV  +E E       P   V++A+ GE
Sbjct:    5 RVFFDIDVDGNRIGRIVIELFADQVPKTAENFRALCTGEKGIGKVSNMPLHYKGSIFHRIIKGFMCQGGDFTHRTGKGGESIYGANFPDESFSRKHDTHGLLSMANRGPNTQTSQFFITTRPTPHLDGKHVVFGRVVSGYNVVEMMENEPVDDQDRPLHNVMIANCGE 172          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.398e-44
Identity = 91/166 (54.82%), Postives = 109/166 (65.66%), Query Frame = 2
Query:    8 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 505
            +V+FD+ I G  AGRIVM L    VPKTAENFR LCT E+G G       YKG +FHR+IP FM Q            +SIYG+KF DENF LKH   G LSMAN+G +TNGSQFFI T  T WLD +HVVFG V+SG +VV K+E  G ++GTP  K+V+   GE
Sbjct:  140 QVFFDIRIGGNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYG-------YKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHVISGAEVVRKMERCGSKSGTPSQKIVIYSCGE 298          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.686e-43
Identity = 96/169 (56.80%), Postives = 109/169 (64.50%), Query Frame = 2
Query:   11 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEK-FPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE---AEGRQNGTPKSKVVVADSGE 505
            V+FD+ + G+P GRI   LF   VP+TAENFR  CTGE      G+P  YKGS FHRIIP+FM Q              IYG K F DENF LKH  PGLLSMANAGP+TNGSQFFITTV T +LDG+HVVFGKV+ GMDVV K+E      R    P   VV+A  GE
Sbjct:   14 VFFDITLGGEPLGRITFELFKDVVPRTAENFRQFCTGESK-NNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVVDGMDVVKKMENTKTGYRGKDVPNLDVVIAQCGE 181          
The following BLAST results are available for this feature:
BLAST of CF832510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
CYPC_YEAST2.128e-4656.02Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]
CYP6_CAEEL2.779e-4656.55Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhab... [more]
PPIC_HUMAN3.630e-4656.80Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIC_BOVIN3.630e-4657.40Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]
CYP40_ARATH4.741e-4655.62Peptidyl-prolyl cis-trans isomerase CYP40 OS=Arabi... [more]
PPIB_SCHJA1.056e-4555.36Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPID_CANAL6.846e-4557.06Peptidyl-prolyl cis-trans isomerase D OS=Candida a... [more]
CYP11_RHIOR2.601e-4457.14Peptidyl-prolyl cis-trans isomerase cyp11 OS=Rhizo... [more]
PPIE_DROME3.398e-4454.82Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]
PPIH_NEUCR1.686e-4356.80Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832510 ID=CF832510; Name=CF832510; organism=Citrus sinensis; type=EST; length=701bp
CACAAACAAAGTCTATTTTGACGTTGAGATTGCTGGAAAACCTGCCGGAC
GTATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAAT
TTCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCC
ACTCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGC
TTCAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATT
TATGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGGCCC
AGGGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCACAAT
TCTTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTA
TTTGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGA
AGGGAGGCAGAATGGCACTCCGAAGAGCAAAGTCGTCGTTGCAGACAGCG
GTGAACTTCCTCTGTGATTTCCCCCATAATTATATAATTACGCTATACAC
CTTTTTAGTCCTCTCGTCTTTTCAACCTTCATGAAGATACTCATAATTTG
CCTATTTATCATGTAATAGACATTTTAAAATGTCCTAGGTTGTTTGCCAA
GCTGGTGCTTCATTTTAAGGGGATCCTTTTCTCTGAAAAAAAAAAAAAAA
A
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