CF832510

Overview
NameCF832510
Unique NameCF832510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.252e-42
Identity = 86/165 (52.12%), Postives = 106/165 (64.24%), Query Frame = 2
Query:   11 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 505
            V+FDV   G+P GRI+M LF   VP+TAENFRALCTGEKG G       +K S FHR++P F+ Q            +SIYG+KF DENF LKHTGPGLLSMAN G +TN SQFFIT      LD +HVVFG V  GMD V K+E+ G   G+   ++ + + G+
Sbjct: 2895 VFFDVCADGEPLGRIIMELFSNIVPQTAENFRALCTGEKGFG-------FKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGSPKGSVSRRICITECGQ 3052          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: RBP2_BOVIN (E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos taurus GN=RANBP2 PE=2 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.578e-41
Identity = 86/165 (52.12%), Postives = 104/165 (63.03%), Query Frame = 2
Query:   11 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 505
            V+FD+    +P GRI M LF   VPKTAENFRALCTGEKG G       +K S FHR+IP F+ Q             SIYG+KF DENF +KHTGPGLLSMAN G DTN SQFFIT      LD +HVVFG V  GMD V K+E+ G   G+   ++++ + G+
Sbjct:  927 VFFDICADDEPLGRITMELFSNIVPKTAENFRALCTGEKGFG-------FKSSIFHRVIPDFVCQGGDITKHDGTGGRSIYGDKFEDENFDVKHTGPGLLSMANRGQDTNNSQFFITLKKAERLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVSRRIIITECGQ 1084          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: CYPH_ENCCU (Peptidyl-prolyl cis-trans isomerase OS=Encephalitozoon cuniculi GN=CPR1 PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.578e-41
Identity = 91/169 (53.85%), Postives = 107/169 (63.31%), Query Frame = 2
Query:    2 TNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKS--KVVVADSG 502
            +  VYFDV    +  GRIVM L    VPKTA+NFR LC   KG G       YKGSTFHRIIP FM+Q             SIYGEKFPDENF+LKHT  G+LSMAN G  TNGSQFFIT   T WLD +HVVFG+V+ GMDVV+K+   G ++G  K   ++ + D G
Sbjct:    6 SGNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEG-------YKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRDCG 167          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.592e-41
Identity = 91/168 (54.17%), Postives = 103/168 (61.31%), Query Frame = 2
Query:    8 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGK--PLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVVADSG 502
            K +FD+ I GKPAGRIV  L+   VPKTAENF  LC G  G  KS    PL YKGS FHR+I SFM Q            ESIYGEKF DENF LKH  P LLSMANAG +TNGSQ FIT V T  LDG+HVVFG+V+ G  +V  +E         P  +V + D G
Sbjct:    7 KTFFDISIGGKPAGRIVFELYSDVVPKTAENFLKLCEGNSGFAKSKPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQGKRLVRTIENNATDEADKPAKEVKIEDCG 174          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.023e-40
Identity = 96/184 (52.17%), Postives = 112/184 (60.87%), Query Frame = 2
Query:    5 NKVYFDVEIAG-------KP-------AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL--SGMDVVYKVEAEGRQNGTPK--SKVVVADSG 502
            +KV+FD+E  G       KP       +GRI   L+   VPKTA NF+ LCTG+ G G       YKGS+FHRIIP FMLQ            +SIYGEKF DENF  KH  PGLLSMANAGP+TNGSQFF+TTV TSWLDGRHVVFG+V     M VV  +EA G  +G  +   K  + D G
Sbjct:   45 SKVFFDLEWEGPVLGPNNKPTSEIKAQSGRINFTLYDDVVPKTARNFKELCTGQNGFG-------YKGSSFHRIIPEFMLQGGDFTRGNGTGGKSIYGEKFADENFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHVVFGEVADDESMKVVKALEATGSSSGAIRYSKKPTIVDCG 221          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: PPIA_SCHMA (Peptidyl-prolyl cis-trans isomerase OS=Schistosoma mansoni PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.336e-40
Identity = 88/166 (53.01%), Postives = 105/166 (63.25%), Query Frame = 2
Query:    8 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 505
            K +FD++   +  GRI+  LF   VP T  NFR LCT +   G       YKGS FHRIIP FM Q            +SIYG KF DENF  KH    L SMANAGP+TNGSQFFITTV  SWLDG+HVVFGKV+SG+DVV K+E+ G  +G P  K+++ D GE
Sbjct:    4 KAFFDIKAGDERLGRIIFELFND-VPDTTRNFRELCTHKNNFG-------YKGSVFHRIIPGFMCQGGDFTNGDGTGGKSIYGNKFKDENFNHKHEAFSL-SMANAGPNTNGSQFFITTVPCSWLDGKHVVFGKVVSGIDVVKKMESLGSTSGKPSKKIIIEDCGE 160          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.745e-40
Identity = 86/163 (52.76%), Postives = 105/163 (64.42%), Query Frame = 2
Query:   14 YFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSG 502
            YFD+ IA +PAGR+   LF   VPKTA NF+ LC G+K   ++G  L Y GS+FHR I  FMLQ            ESIYGEKF DENF+LKH  P LLSMANAGP TNGSQFFITTV T  LDG+HVVFG+V+    +V ++E     +  P   V ++ +G
Sbjct:    7 YFDITIANEPAGRLTFELFDDVVPKTANNFKHLCIGDK-TNEAGVKLAYAGSSFHRCIKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRVIYNRSLVRRIENIPTTSDRPDQAVTISSAG 168          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: RBP2_HUMAN (E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=RANBP2 PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.279e-40
Identity = 85/165 (51.52%), Postives = 104/165 (63.03%), Query Frame = 2
Query:   11 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 505
            V+FDV   G+P GRI M LF   VP+TAENFRALCTGEKG G       +K S FHR+IP F+ Q            +SIYG+KF DENF +KHTGPGLLSMAN G +TN SQF IT      LD +HVVFG V  GMD V K+E+ G   G+   ++ + + G+
Sbjct: 3066 VFFDVCADGEPLGRITMELFSNIVPRTAENFRALCTGEKGFG-------FKNSIFHRVIPDFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSMANQGQNTNNSQFVITLKKAEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVCRRITITECGQ 3223          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.279e-40
Identity = 87/167 (52.10%), Postives = 109/167 (65.27%), Query Frame = 2
Query:   11 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEK-FPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEG-RQNGTPKSKVVVADSGE 505
            V+ D+ I G+  GRI + LF   VPKTAENFR  CTGE  +G + KP+ YK STFHRII  FM+Q             +I+  + FPDENF LKH  PGLLSMANAG D+NG QFFITTV   +LDG+HVVFG+V+ G D+V ++E+     N  PKS V + + GE
Sbjct:    7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGET-LGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGE 172          
BLAST of CF832510 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.279e-40
Identity = 87/168 (51.79%), Postives = 107/168 (63.69%), Query Frame = 2
Query:    8 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSG-KPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGT-PKSKVVVADSGE 505
            + +FD+ I  +PAGR+V  LF    PKT ENFR LCTGEKG GKS  KPLHYK   FHR++  FM+Q            ESIYG  F DE+F +KH    LLSMAN G DTNGSQFFITT  T  LDG HVVFG+V+SG +VV ++E +     + P ++V +   GE
Sbjct:    9 RCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGE 176          
The following BLAST results are available for this feature:
BLAST of CF832510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 225
Match NameE-valueIdentityDescription
RBP2_MOUSE9.252e-4252.12E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
RBP2_BOVIN1.578e-4152.12E3 SUMO-protein ligase RANBP2 (Fragment) OS=Bos ta... [more]
CYPH_ENCCU1.578e-4153.85Peptidyl-prolyl cis-trans isomerase OS=Encephalito... [more]
PPID_KLULA4.592e-4154.17Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]
CYPH_NEUCR1.023e-4052.17Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIA_SCHMA1.336e-4053.01Peptidyl-prolyl cis-trans isomerase OS=Schistosoma... [more]
PPID_CRYNE1.745e-4052.76Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
RBP2_HUMAN2.279e-4051.52E3 SUMO-protein ligase RANBP2 OS=Homo sapiens GN=R... [more]
PPIH_SCHPO2.279e-4052.10Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
PPIG_RAT2.279e-4051.79Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832510 ID=CF832510; Name=CF832510; organism=Citrus sinensis; type=EST; length=701bp
CACAAACAAAGTCTATTTTGACGTTGAGATTGCTGGAAAACCTGCCGGAC
GTATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAAT
TTCCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCC
ACTCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGC
TTCAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATT
TATGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGGCCC
AGGGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCACAAT
TCTTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTA
TTTGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGA
AGGGAGGCAGAATGGCACTCCGAAGAGCAAAGTCGTCGTTGCAGACAGCG
GTGAACTTCCTCTGTGATTTCCCCCATAATTATATAATTACGCTATACAC
CTTTTTAGTCCTCTCGTCTTTTCAACCTTCATGAAGATACTCATAATTTG
CCTATTTATCATGTAATAGACATTTTAAAATGTCCTAGGTTGTTTGCCAA
GCTGGTGCTTCATTTTAAGGGGATCCTTTTCTCTGAAAAAAAAAAAAAAA
A
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