CF832519
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: CAIE_ECO8A (Carnitine operon protein caiE OS=Escherichia coli O8 (strain IAI1) GN=caiE PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.822e-20 Identity = 57/165 (34.55%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 699 PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+ ++ G PAR +R ++++E+ + + Y +L R HA+ Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: CAIE_ECO55 (Carnitine operon protein caiE OS=Escherichia coli (strain 55989 / EAEC) GN=caiE PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.822e-20 Identity = 57/165 (34.55%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 699 PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+ ++ G PAR +R ++++E+ + + Y +L R HA+ Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: CAIE_ECO24 (Carnitine operon protein caiE OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=caiE PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.822e-20 Identity = 57/165 (34.55%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 699 PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+ ++ G PAR +R ++++E+ + + Y +L R HA+ Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: CAIE_ECOLC (Carnitine operon protein caiE OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=caiE PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.686e-20 Identity = 56/165 (33.94%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 699 P+V+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+ ++ G PAR +R ++++E+ + + Y +L R HA+ Sbjct: 11 PIVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFSGEKRQLLIGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: CAIE_ECOLI (Carnitine operon protein caiE OS=Escherichia coli (strain K12) GN=caiE PE=3 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.814e-20 Identity = 56/165 (33.94%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 699 PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+ + ++ G PAR +R ++++E+ + + Y +L R H + Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHVS 169
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: CAIE_ECODH (Carnitine operon protein caiE OS=Escherichia coli (strain K12 / DH10B) GN=caiE PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.814e-20 Identity = 56/165 (33.94%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 699 PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+ + ++ G PAR +R ++++E+ + + Y +L R H + Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHVS 169
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: CAIE_ECOBW (Carnitine operon protein caiE OS=Escherichia coli (strain K12 / BW2952) GN=caiE PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.814e-20 Identity = 56/165 (33.94%), Postives = 92/165 (55.76%), Query Frame = 1 Query: 208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 699 PVV+ F+ PSA +IGDV VG G I LRGD + + +G NIQD ++H TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+ + ++ G PAR +R ++++E+ + + Y +L R H + Sbjct: 11 PVVHPTAFVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCLIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFRGEKRQLLMGTPARAVRNVSDDELHWKRLNTKEYQDLVGRCHVS 169
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: CAIE_SHIDS (Carnitine operon protein caiE OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=caiE PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 3.120e-19 Identity = 56/165 (33.94%), Postives = 91/165 (55.15%), Query Frame = 1 Query: 208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL-ARVHAA 699 PVV+ F+ PSA +IG V VG G I LRGD + + +G NIQD ++H TI+G+N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+ ++ G PAR +R ++++E+ + + Y +L R HA+ Sbjct: 11 PVVHPTAFVHPSAVLIGYVIVGAGVYIGPLASLRGDYGRLIVQAGANIQDGCIMHGYCDT------DTIVGENGHIGHGAILHGCVIGRDALVGMNSVIMDGAVIGEESIVAAMSFVKAGFHGEKRQLLMGTPARAVRSVSDDELHWKRLNTKEYQDLVGRCHAS 169
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: CAIE_CITK8 (Carnitine operon protein caiE OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=caiE PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.323e-19 Identity = 54/159 (33.96%), Postives = 88/159 (55.35%), Query Frame = 1 Query: 208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNLA 684 PVV+ + ++ PSA +IGDV VG G I LRGD + + +G N+QD ++H TI+ +N +GH A+LHGC + +A VGM + ++DG + + ++VAA + V+ ++ G PAR R +T+EE+ + + Y +LA Sbjct: 11 PVVHPEAYVHPSAVLIGDVIVGAGVYIGPLASLRGDYGRLILEAGANLQDGCIMHGYCDT------DTIVHENGHIGHGAILHGCVIGRDALVGMNSVIMDGAIIGEESIVAAMSFVKAGFVGAPRQLLVGAPARVKRDVTDEELHWKRLNTQEYQDLA 163
BLAST of CF832519 vs. ExPASy Swiss-Prot
Match: CAIE_PROSL (Carnitine operon protein caiE OS=Proteus sp. (strain LE138) GN=caiE PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.450e-18 Identity = 47/158 (29.75%), Postives = 89/158 (56.33%), Query Frame = 1 Query: 208 PVVNKDVFLAPSASIIGDVQVGRGSSIWYGCVLRGDVNSISIGSGTNIQDNSLVHVAKSNLAGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGATLLDGVYVEKHAMVAAGALVRQNTKIPCGEVWGGNPARFLRKLTEEEMAFISQSAINYSNL 681 PVV+ ++ PSA +IGDV +G G I LRGD + + +G N+QD ++H + TI+ +N +GH A+LH C + ++ VGM + ++DG + + ++VAA + V+ + ++ G+PA+ +R +++++M + + Y +L Sbjct: 11 PVVHPTAYIHPSAVLIGDVIIGAGVYIGPLASLRGDYGRLIVEAGANLQDGCVMHGYTD------MDTIVQENGHIGHGAILHSCIIGRDSLVGMNSVIMDGAIIGEESIVAAMSFVKAGFQGQARQMLMGSPAKHVRDISDQDMQWKRMNTREYQDL 162 The following BLAST results are available for this feature:
BLAST of CF832519 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832519 ID=CF832519; Name=CF832519; organism=Citrus sinensis; type=EST; length=862bpback to top |