CF832524

Overview
NameCF832524
Unique NameCF832524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7951 contig Csv1_Contig7951:426..1149. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: ILEUA_RAT (Leukocyte elastase inhibitor A OS=Rattus norvegicus GN=Serpinb1a PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.852e-22
Identity = 79/240 (32.92%), Postives = 111/240 (46.25%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGF--KVLGLPYKQGEDKRRFSMYFFLP----DAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGD--FRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            G  D+ T+L+  NA+YFKG W E F    T D  F L    +  V  M  KK  F         KVL +PY+ GE     SM   LP    D   GL  + E++  E   L      + +E  D   ++PRFKI     ++           F+     L+ M  S   ++L++S I  K+F+EVNEEGTE         +    +L  + +F ADHPF+F IR + T  V+F G V +P
Sbjct:  151 GVVDSMTKLVLVNAIYFKGMWEEKFMKQDTTDAPFRLNKKNTKSVKMMYQKKKFFFGYISDLKCKVLEMPYQGGE----LSMVILLPEDIEDESTGLKKIEEQITLEK--LREWTKRENLENIDVHVKLPRFKIEESYILNSNLGRLGLQDLFNSSKADLSGMSGS---RDLFISKIVHKAFVEVNEEGTEAAAATAG--IATFCMLLPEEEFTADHPFIFFIRHNPTANVLFLGRVCSP 379          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB10_RHIFE (Serpin B10 OS=Rhinolophus ferrumequinum GN=SERPINB10 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.031e-22
Identity = 68/233 (29.18%), Postives = 112/233 (48.07%), Query Frame = 2
Query:    8 SADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGD--FRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            + D++TR++  NA+YFKG W   F +  T++  F +    S  V  M+ KK   V   +  + +GL      + R  S++  LP+   GL  L + +  E   L     +  +E+ D    +P+FK+    ++            F+      + M    V  NL++S++F KSF+E+NE+GTE        V LR  +    I+F ADHPF+F IR + T  ++F G   +P
Sbjct:  174 AVDSATRMVLVNAIYFKGIWEHQFSARDTREKPFRINKNTSKPVQMMSMKKKLQVFHIENPQAIGLQLYY--ESRDLSLFLLLPEDVSGLDQLEKAVTYEK--LSEWTSADMMELYDVQLHLPKFKLEESYDLKSALSSMGMSDAFNQSKADFSGM---SVEGNLFLSNVFHKSFVEINEQGTEASAGTGSEVSLR--IRLPSIEFNADHPFLFFIRHNKTNSILFYGRFCSP 397          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: ILEU_HORSE (Leukocyte elastase inhibitor OS=Equus caballus GN=SERPINB1 PE=1 SV=3)

HSP 1 Score: 103.99 bits (258), Expect = 8.582e-22
Identity = 78/239 (32.64%), Postives = 117/239 (48.95%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFK--VLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSE---SKFLDHHLPSQ--RVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            G  DN T+L+  NA+YFKG W E F    T+D  F L    +  V  M  KK    +  +  K  VL LPY QG++    SM   LPD  +   T LEK+  +    K  +   P      EV +  +PRFK+    +++           F+    G A++      ++L+VS I  KSF+++NEEGTE       T++L   +L  + +F ADHPF+F IR + +  ++F G   +P
Sbjct:  151 GMVDNMTKLVLVNAIYFKGNWQEKFMKEATRDAPFRLNKKDTKTVKMMYQKKKFPYNYIEDLKCRVLELPY-QGKE---LSMIILLPDDIEDESTGLEKIEKQLTLEKLREWTKPENLYLAEV-NVHLPRFKLEESYDLTSHLARLGVQDLFN---RGKADLSGMSGARDLFVSKIIHKSFVDLNEEGTEAAAATAGTIML--AMLMPEENFNADHPFIFFIRHNPSANILFLGRFSSP 379          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB10_RAT (Serpin B10 OS=Rattus norvegicus GN=Serpinb10 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21
Identity = 65/233 (27.90%), Postives = 110/233 (47.21%), Query Frame = 2
Query:    8 SADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFR--IPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            + DN T ++  NALYFKG W   F    T +  F +    S  V  M+ K++  V   +  + +G+        R FS+   LP+  +GL  L   +  E   LD    +  ++  + R  +P+FK+    ++            F+      + M      +NL++S++F K+F+E+NEEGTE        V  R  + +  I+  ADHPF+F+IR ++T  ++F G   +P
Sbjct:  174 AVDNKTTMVLVNALYFKGTWEHQFSVQNTTERPFRINKTTSKPVQMMSMKQSLQVFHIEELQTIGVQLHY--QNREFSLLLLLPEEVEGLKQLERAITYEK--LDKWTSADMMDTYEVRLYLPKFKMEESYDLQSALRDMGMTDAFNQGKANFSNMTSE---RNLFLSNVFHKTFLEINEEGTEAAAGTGSEVNFR--IKAPSIELNADHPFLFLIRHNVTNTILFDGRFYSP 397          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SERA_MANSE (Alaserpin OS=Manduca sexta PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.121e-21
Identity = 74/238 (31.09%), Postives = 119/238 (50.00%), Query Frame = 2
Query:    2 PGSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKN---QFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKF--LDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            P + D +TR +  NA+YFKG+W + F   +T D DFH+    +IKVP M  KK+     V   D  K++ + Y +G+   + SM   LP+  DG+  L +K+         +  L +  VE+    +P+FKI   +++            F+     L  ++ +   ++LYV +  QK+FIEVNEEG E        +V  S++L  ++    D PF F ++ D  G+ MF G V+ P
Sbjct:  169 PDALDETTRSVLVNAIYFKGSWKDKFVKERTMDRDFHVSKDKTIKVPTMIGKKDVRYADVPELDA-KMIEMSY-EGD---QASMIIILPNQVDGITALEQKLKDPKALSRAEERLYNTEVEI---YLPKFKIETTTDLKEVLSNMNIKKLFTPGAARLENLLKTK--ESLYVDAAIQKAFIEVNEEGAEAAAANAFGIVPASLILYPEVHI--DRPFYFELKID--GIPMFNGKVIEP 392          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: ILEUA_MOUSE (Leukocyte elastase inhibitor A OS=Mus musculus GN=Serpinb1a PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.464e-21
Identity = 82/249 (32.93%), Postives = 115/249 (46.18%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKN---QFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLP----DAKDGLPTL-----LEKMGSESK-----FLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            G  D+ T+L+  NA+YFKG W E F +  T D  F L    +  V  M  KK     ++S     KVL +PY+ GE     SM   LP    D   GL  +     LEK+   +K     F+D H+          ++PRFKI     ++           FS     L+ M  S   ++L++S I  KSF+EVNEEGTE         +    +L  + +F  DHPF+F IR + T  V+F G V +P
Sbjct:  151 GVVDSMTKLVLVNAIYFKGMWEEKFMTEDTTDAPFRLSKKDTKTVKMMYQKKKFPFGYISDLK-CKVLEMPYQGGE----LSMVILLPKDIEDESTGLKKIEKQITLEKLLEWTKRENLEFIDVHV----------KLPRFKIEESYTLNSNLGRLGVQDLFSSSKADLSGMSGS---RDLFISKIVHKSFVEVNEEGTEAAAATGG--IATFCMLLPEEEFTVDHPFIFFIRHNPTSNVLFLGRVCSP 379          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB4_HUMAN (Serpin B4 OS=Homo sapiens GN=SERPINB4 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20
Identity = 75/235 (31.91%), Postives = 109/235 (46.38%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF---DGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            G+  N T L+  NA+YFKG W   F    TK+  F   N  + K   M  + N F  A       KVL +PYK G+D    SM   LP+  DGL  L EK+ +E       L + R    D  +PRFK+    ++            F+G+    A++        L VS +  K+F+EV EEG E        VV  S   +++ +F  +HPF+F IR++ T  ++F G   +P
Sbjct:  166 GTIGNDTTLVLVNAIYFKGQWENKFKKENTKEEKF-WPNKNTYKSVQMMRQYNSFNFALLEDVQAKVLEIPYK-GKD---LSMIVLLPNEIDGLQKLEEKLTAEKLMEWTSLQNMRETCVDLHLPRFKMEESYDLKDTLRTMGMVNIFNGD----ADLSGMTWSHGLSVSKVLHKAFVEVTEEGVEAAAATAVVVVELSSPSTNE-EFCCNHPFLFFIRQNKTNSILFYGRFSSP 390          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB10_OTOGA (Serpin B10 OS=Otolemur garnettii GN=SERPINB10 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20
Identity = 69/233 (29.61%), Postives = 111/233 (47.64%), Query Frame = 2
Query:    8 SADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFR--IPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            S D++TR+I  NALYFKG W   F +  T +  F +    S  V  M+ K+   V   +  +  GL      ++R  S++  LP+   GL  L + +  E   L+    +  +E+ D +  +P+FK+    ++            F+      + M    + +NLY+S+IF K F+E+NEEGTE        V  R  +    I+F  DHPF+F IR + T  ++F G   +P
Sbjct:  174 SVDSTTRMILVNALYFKGTWEHQFLAQNTTEKPFRINETTSKPVQMMSMKEKLHVFHIEKPQATGLQLYY--ERRDVSLFILLPEDLGGLEQLEKAITYEK--LNEWTSADMMELYDVQLSLPKFKLEESYDLKSTLSSMGMSDAFNPSKADFSGM---SLERNLYLSNIFHKVFVEINEEGTEAAAGTGSEVGFR--IKYPSIEFNVDHPFLFFIRHNKTNSILFYGRFCSP 397          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB10_MOUSE (Serpin B10 OS=Mus musculus GN=Serpinb10 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20
Identity = 65/233 (27.90%), Postives = 108/233 (46.35%), Query Frame = 2
Query:    8 SADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFR--IPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            S D  T+++  NALYFKG W   F    T +  F +    S  V  M+ K++  V   +  + +GL        R  S+   LP+A DGL  L   +  E   LD    +  ++  + +  +P+FK+    ++            FS      + M      +NL++S++F K+F+E+NEEGTE        + +R  + +  I+   DHPF+F IR + T  ++F G   +P
Sbjct:  174 SVDTKTKMVLVNALYFKGTWEHQFSVKNTTERPFRVNKTTSKPVQMMSMKQSLQVFHIEELQTIGLQLHY--QNRDLSLLLLLPEAIDGLEQLERAITYEK--LDKWTSADMMDTYEVQLYLPKFKMEESYDLKSALRGMGMTDVFSQSKADFSNMTSE---RNLFLSNVFHKTFLEINEEGTEAAAGTGSEISVR--IKAPSIELNVDHPFLFFIRHNKTKSILFCGRFCSP 397          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: A1AT_BOMMO (Antitrypsin OS=Bombyx mori PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.619e-20
Identity = 72/235 (30.64%), Postives = 114/235 (48.51%), Query Frame = 2
Query:    2 PGSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFV--SAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRS-IVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLN 697
            P S  ++T  +  NA+YFKGAW+  FD   T D DF++    +IKVP M  + +     SA    +++ +PYK  +     S+   LP  KDG+  L E +  + K L+    S      D  +P+FKI   + +            F+ +    A++     G++L VS   QK+FIE+NEEG E       T+   S + +   I F A+ PF + ++ D  G++MF G  +N
Sbjct:  169 PDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAVLNAQLIEIPYKGDQS----SLIVVLPKDKDGITQLQEAL-KDPKTLETAQQSMYSTEVDLYLPKFKIETETNLKDVLSNMNVNKIFNND----AQITRLLKGESLSVSEAIQKAFIEINEEGAEAAAANAFTMTRSSKVYVRPPIVFNANKPFYYALQVD--GVIMFNGIFIN 392          
The following BLAST results are available for this feature:
BLAST of CF832524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
ILEUA_RAT3.852e-2232.92Leukocyte elastase inhibitor A OS=Rattus norvegicu... [more]
SPB10_RHIFE5.031e-2229.18Serpin B10 OS=Rhinolophus ferrumequinum GN=SERPINB... [more]
ILEU_HORSE8.582e-2232.64Leukocyte elastase inhibitor OS=Equus caballus GN=... [more]
SPB10_RAT1.121e-2127.90Serpin B10 OS=Rattus norvegicus GN=Serpinb10 PE=2 ... [more]
SERA_MANSE1.121e-2131.09Alaserpin OS=Manduca sexta PE=1 SV=1[more]
ILEUA_MOUSE1.464e-2132.93Leukocyte elastase inhibitor A OS=Mus musculus GN=... [more]
SPB4_HUMAN1.239e-2031.91Serpin B4 OS=Homo sapiens GN=SERPINB4 PE=1 SV=2[more]
SPB10_OTOGA1.239e-2029.61Serpin B10 OS=Otolemur garnettii GN=SERPINB10 PE=3... [more]
SPB10_MOUSE1.239e-2027.90Serpin B10 OS=Mus musculus GN=Serpinb10 PE=2 SV=1[more]
A1AT_BOMMO1.619e-2030.64Antitrypsin OS=Bombyx mori PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832524 ID=CF832524; Name=CF832524; organism=Citrus sinensis; type=EST; length=724bp
TCCTGGTTCAGCTGACAATTCAACCAGGCTCATCTTTGCAAATGCACTAT
ACTTCAAAGGAGCTTGGAATGAAACATTTGATTCATCAAAGACAAAAGAC
TATGACTTTCACCTTCTCAATGGAGGCTCCATTAAAGTGCCTTTCATGAC
TAGCAAGAAGAATCAGTTTGTGAGTGCCTTTGATGGTTTCAAAGTTTTAG
GGCTTCCTTACAAACAAGGTGAGGATAAACGCCGTTTCTCCATGTACTTT
TTCCTTCCGGATGCAAAAGATGGGCTGCCAACTTTACTAGAGAAGATGGG
ATCTGAATCTAAGTTTTTAGACCACCACCTTCCATCCCAAAGAGTAGAAG
TGGGCGACTTCAGGATTCCTAGGTTTAAGATTTCTTTTGGGAGTGAAGTT
TCTAAAGTCCTCAAGGGATTAGGACTAGTGTTGCCTTTTTCTGGTGAAGG
AGGTGGTTTGGCAGAGATGGTGGATTCCCCTGTGGGTAAGAACCTATATG
TTTCAAGTATCTTCCAGAAGTCCTTCATAGAAGTTAATGAAGAAGGAACG
GAAGCTGCAGCTGCTTCGGCAGCTACTGTAGTACTTAGGTCGATAGTTCT
TTCAGATAAGATAGATTTTGTAGCTGACCACCCATTTGTGTTCATGATAA
GAGAAGACATGACTGGTTTGGTGATGTTCACTGGTCATGTCCTCAATCCT
CTTGCTGGCTGATTAATACTCATA
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