CF832524

Overview
NameCF832524
Unique NameCF832524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7951 contig Csv1_Contig7951:426..1149. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB6_MACFA (Serpin B6 OS=Macaca fascicularis GN=SERPINB6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.337e-19
Identity = 76/241 (31.54%), Postives = 110/241 (45.64%), Query Frame = 2
Query:    2 PGSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM----TSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLD----HHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            PGS D  TRL+  NA+YFKG WNE FD   T++  F +       V  M    T +K      F   ++L LPY   E     +M   LPD    L T +EK  +  KF++      +  ++VEV    +PRFK+    ++            F       + M  +    +L +S +  KSF+EVNEEGTE        +++R      +  F ADHPF+F I+   T  V+F G   +P
Sbjct:  152 PGSVDPLTRLVLVNAVYFKGNWNEQFDKENTEERRFKVSKNEEKPVQMMFMQSTFRKTYIGEIFT--QILVLPYVGKE----LNMIIMLPDETTDLRT-VEKELTYEKFVEWTRLDMMDEEKVEVS---LPRFKLEESYDMESVLCSLGMTDAFELGKADFSGMSKA----DLCLSKVVHKSFVEVNEEGTEAAAATAAIMMMRCARFVPR--FCADHPFLFFIQHSKTNGVLFCGRFSSP 376          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB3_HUMAN (Serpin B3 OS=Homo sapiens GN=SERPINB3 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.052e-19
Identity = 71/234 (30.34%), Postives = 108/234 (46.15%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKN-QFVSAFD-GFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            G+  ++T L+  NA+YFKG W + F+   TK+  F         +  M    +  F S  D   KVL +PYK G+D    SM   LP+  DGL  L EK+ +E       L + R    D  +PRFK+    ++            F+G+    A++      + L +S +  K+F+EV EEG E        V   S   S   +F  +HPF+F IR++ T  ++F G   +P
Sbjct:  166 GNIGSNTTLVLVNAIYFKGQWEKKFNKEDTKEEKFWPNKNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYK-GKD---LSMIVLLPNEIDGLQKLEEKLTAEKLMEWTSLQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFNGD----ADLSGMTGSRGLVLSGVLHKAFVEVTEEGAE-AAAATAVVGFGSSPTSTNEEFHCNHPFLFFIRQNKTNSILFYGRFSSP 390          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB13_HUMAN (Serpin B13 OS=Homo sapiens GN=SERPINB13 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.052e-19
Identity = 65/235 (27.66%), Postives = 104/235 (44.26%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGF--KVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVE-VGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            GS  +ST+L+  N +YFKG W+  F    TK+  F +    S  V  MT   +   +  +    K+LG+PYK  +     SM+  LP+  DGL  +++K+  E K ++   P    E   +  +PRF++  G ++            FS      + M     G  LY       SF+ V EEGTE          + S    + +    +HPF+F IR + +  ++F G   +P
Sbjct:  167 GSISSSTKLVLVNMVYFKGQWDREFKKENTKEEKFWMNKSTSKSVQMMTQSHSFSFTFLEDLQAKILGIPYKNND----LSMFVLLPNDIDGLEKIIDKISPE-KLVEWTSPGHMEERKVNLHLPRFEVEDGYDLEAVLAAMGMGDAFSEHKADYSGMSS---GSGLYAQKFLHSSFVAVTEEGTEAAAATGIGFTVTSAPGHENVH--CNHPFLFFIRHNESNSILFFGRFSSP 391          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: ILEU_BOVIN (Leukocyte elastase inhibitor OS=Bos taurus GN=SERPINB1 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 3.052e-19
Identity = 73/238 (30.67%), Postives = 111/238 (46.64%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFK--VLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKF--LDHHLPSQRVEVGDFRI--PRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            G  D+ T+L+  NA+YFKG W E F    TKD  F L    +  V  M  KK          K  VL LPY +G+D    SM   LPD      T L+K+  +     L      + +++ + R+  PRFK+    ++            FS +    A++      K+L++S +  KS ++VNEEGTE         +    +L  + +FVADHPF+F IR   +  ++F G + +P
Sbjct:  150 GMVDSLTKLVLVNAIYFKGKWQEKFMVEATKDAPFRLNKKETKTVKMMYQKKKFPFGYIKDLKCRVLELPY-EGKD---LSMVILLPDDIQDEATGLKKIEQQLTLEKLREWTRPESLDLLEVRVQLPRFKLEESYDLQEPLARLGVRDLFSSK----ADLSGMSGAKDLFISKVVHKSVVDVNEEGTEAAAATG--AIAEFAMLVPEEEFVADHPFIFFIRHKPSSNILFLGRLSSP 377          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPI2_MOUSE (Serpin I2 OS=Mus musculus GN=Serpini2 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19
Identity = 70/231 (30.30%), Postives = 112/231 (48.48%), Query Frame = 2
Query:   23 TRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM----TSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKM-GSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            TRL+  NA+YFKG W + F    T+  DF   +G ++KVP M     ++   F  +    +VL LPYK  E    FS+   LP     +  +  ++     +     L  + VEV    +PRFKI    ++            FSG G  L+ + DS     +YVS + QK F E+NE+G+E        + + +I+   +  F+A+HPF+F+++   T  ++F G V +P
Sbjct:  175 TRLVLVNAIYFKGDWKQKFRKEDTEMTDFTKKDGSTVKVPMMKALLRAQYGYFSQSSMTCQVLELPYKADE----FSLVIILPTEDTSIEEVENQVTAPHVRRWFSELHEEEVEVS---LPRFKIEQKLDLKEALYSLNVTEIFSG-GCDLSGITDS---SEVYVSRVMQKVFFEINEDGSEAAASTG--INIPAIMSLTQTQFLANHPFLFILKHIRTESILFMGKVTDP 392          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB10_PAPAN (Serpin B10 OS=Papio anubis GN=SERPINB10 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 5.207e-19
Identity = 69/235 (29.36%), Postives = 113/235 (48.09%), Query Frame = 2
Query:    8 SADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLP--YKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGD--FRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            S D++TR+I  NALYFKG W   F    T +  F +    S  V  M  KK   +   +  + +GL   YK     R  S+   LP+  +GL  L + +  E   L+    +  +E+ +    +P+FK+    ++            FS      + M  +   +NL++S++F K+F+E+NE+GTE        +  R  V S  I+F A+HPF+F IR + T  ++F G + +P
Sbjct:  174 SVDSTTRMILVNALYFKGIWEHQFLVQNTTEKPFRINETTSKPVQMMFMKKKLQIFHIEKPQAVGLQLYYK----SRDLSLLILLPEDINGLVQLEKDITYEK--LNEWTSADMMELYEVQLHLPKFKLEDSYDLKSTLSSMGMSDAFSQSKADFSGMSSA---RNLFLSNVFHKAFVEINEQGTEAAAGTGSEIESRIRVPS--IEFNANHPFLFFIRHNKTNSILFYGRLCSP 397          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB10_CALJA (Serpin B10 OS=Callithrix jacchus GN=SERPINB10 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.881e-19
Identity = 68/235 (28.94%), Postives = 112/235 (47.66%), Query Frame = 2
Query:    8 SADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLP--YKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEV--GDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            S D++TR++  NALYFKG W   F    T +  F +    S  V  M  K+   +   +  + LGL   YK     R  S++  LP+  +GL  L + +  E   L+    +  +EV      +P+FK+    ++            FS      + M  +   +NL++S++F K+F+E++E+GTE        +  R  V S  I+F A+HPF+F IR + T  ++F G   +P
Sbjct:  174 SVDSTTRMVLVNALYFKGIWEHQFLVQHTTEKPFRINETTSKPVQMMFMKEKLQIFHIEKPQALGLQLYYK----SRDLSLFILLPEDINGLEQLEKAITYEK--LNEWTSADMMEVYHVQLHLPKFKLEESYDLKSTLSSMGMRDAFSESKADFSGMSSA---RNLFLSNVFHKAFVEIDEQGTEAAAGSGSEISFRMKVPS--IEFNANHPFLFFIRHNKTNNILFYGRFCSP 397          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB10_BOVIN (Serpin B10 OS=Bos taurus GN=SERPINB10 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.881e-19
Identity = 66/233 (28.33%), Postives = 109/233 (46.78%), Query Frame = 2
Query:    8 SADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGD--FRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            + D +TR++  NALYFKG W   F    T +  F +    S  V  M+ K+   V   +  + +GL      + R  S+   LP+  DGL  L + +  E   L     +  +E+ +    +P+FK+    ++            F+      + M      +NL++S++F K F+E+NE+GTE        V +R  + S  I+F ADHPF+F IR + T  ++F G   +P
Sbjct:  174 AVDPTTRMVLVNALYFKGVWEHQFLVQNTTEKSFKINKTTSKPVQMMSMKEKLQVFYIESPQAMGLQLYY--ESRDLSLLILLPEDVDGLDQLEKTITYEK--LSEWTSADMMELCNVQLNLPKFKLEETYDLKSTLSSMGMSDAFNQSKADFSGMSSE---RNLFLSNVFHKCFVEINEQGTEAAAGTGSEVSVRMKLPS--IEFNADHPFLFFIRHNKTNGILFYGRFCSP 397          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB6_PONAB (Serpin B6 OS=Pongo abelii GN=SERPINB6 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 72/237 (30.38%), Postives = 109/237 (45.99%), Query Frame = 2
Query:    2 PGSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDG---FKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLD-HHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            PGS D  TRL+  NA+YF+G W+E FD   T++  F +       V  M  K++ F   + G    ++L LPY   E     +M   LPD    L T +EK  +  KF++   L     E  +  +PRFK+    ++            F       + M  +    +L +S +  KSF+EVNEEGTE        +++R      +  F ADHPF+F I+   T  ++F G   +P
Sbjct:  152 PGSVDPLTRLVLVNAVYFRGNWDEQFDKENTEERLFKVSKNEEKPVQMM-FKQSTFKKTYIGEIFTQILVLPYVGKE----LNMIIMLPDETTDLRT-VEKELTYEKFVEWTRLDMMDEEEVEVSLPRFKLEESYDMESVLRNLGMTDAFELGKADFSGMSQT----DLSLSKVVHKSFVEVNEEGTEAAAATAAIMMMRCARFVPR--FCADHPFLFFIQHSKTNGILFCGRFSSP 376          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB6_HUMAN (Serpin B6 OS=Homo sapiens GN=SERPINB6 PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 72/237 (30.38%), Postives = 109/237 (45.99%), Query Frame = 2
Query:    2 PGSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDG---FKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLD-HHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            PGS D  TRL+  NA+YF+G W+E FD   T++  F +       V  M  K++ F   + G    ++L LPY   E     +M   LPD    L T +EK  +  KF++   L     E  +  +PRFK+    ++            F       + M  +    +L +S +  KSF+EVNEEGTE        +++R      +  F ADHPF+F I+   T  ++F G   +P
Sbjct:  152 PGSVDPLTRLVLVNAVYFRGNWDEQFDKENTEERLFKVSKNEEKPVQMM-FKQSTFKKTYIGEIFTQILVLPYVGKE----LNMIIMLPDETTDLRT-VEKELTYEKFVEWTRLDMMDEEEVEVSLPRFKLEESYDMESVLRNLGMTDAFELGKADFSGMSQT----DLSLSKVVHKSFVEVNEEGTEAAAATAAIMMMRCARFVPR--FCADHPFLFFIQHSKTNGILFCGRFSSP 376          
The following BLAST results are available for this feature:
BLAST of CF832524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
SPB6_MACFA2.337e-1931.54Serpin B6 OS=Macaca fascicularis GN=SERPINB6 PE=2 ... [more]
SPB3_HUMAN3.052e-1930.34Serpin B3 OS=Homo sapiens GN=SERPINB3 PE=1 SV=2[more]
SPB13_HUMAN3.052e-1927.66Serpin B13 OS=Homo sapiens GN=SERPINB13 PE=2 SV=2[more]
ILEU_BOVIN3.052e-1930.67Leukocyte elastase inhibitor OS=Bos taurus GN=SERP... [more]
SPI2_MOUSE5.207e-1930.30Serpin I2 OS=Mus musculus GN=Serpini2 PE=1 SV=1[more]
SPB10_PAPAN5.207e-1929.36Serpin B10 OS=Papio anubis GN=SERPINB10 PE=3 SV=1[more]
SPB10_CALJA8.881e-1928.94Serpin B10 OS=Callithrix jacchus GN=SERPINB10 PE=3... [more]
SPB10_BOVIN8.881e-1928.33Serpin B10 OS=Bos taurus GN=SERPINB10 PE=2 SV=1[more]
SPB6_PONAB1.978e-1830.38Serpin B6 OS=Pongo abelii GN=SERPINB6 PE=2 SV=1[more]
SPB6_HUMAN1.978e-1830.38Serpin B6 OS=Homo sapiens GN=SERPINB6 PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832524 ID=CF832524; Name=CF832524; organism=Citrus sinensis; type=EST; length=724bp
TCCTGGTTCAGCTGACAATTCAACCAGGCTCATCTTTGCAAATGCACTAT
ACTTCAAAGGAGCTTGGAATGAAACATTTGATTCATCAAAGACAAAAGAC
TATGACTTTCACCTTCTCAATGGAGGCTCCATTAAAGTGCCTTTCATGAC
TAGCAAGAAGAATCAGTTTGTGAGTGCCTTTGATGGTTTCAAAGTTTTAG
GGCTTCCTTACAAACAAGGTGAGGATAAACGCCGTTTCTCCATGTACTTT
TTCCTTCCGGATGCAAAAGATGGGCTGCCAACTTTACTAGAGAAGATGGG
ATCTGAATCTAAGTTTTTAGACCACCACCTTCCATCCCAAAGAGTAGAAG
TGGGCGACTTCAGGATTCCTAGGTTTAAGATTTCTTTTGGGAGTGAAGTT
TCTAAAGTCCTCAAGGGATTAGGACTAGTGTTGCCTTTTTCTGGTGAAGG
AGGTGGTTTGGCAGAGATGGTGGATTCCCCTGTGGGTAAGAACCTATATG
TTTCAAGTATCTTCCAGAAGTCCTTCATAGAAGTTAATGAAGAAGGAACG
GAAGCTGCAGCTGCTTCGGCAGCTACTGTAGTACTTAGGTCGATAGTTCT
TTCAGATAAGATAGATTTTGTAGCTGACCACCCATTTGTGTTCATGATAA
GAGAAGACATGACTGGTTTGGTGATGTTCACTGGTCATGTCCTCAATCCT
CTTGCTGGCTGATTAATACTCATA
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