CF832524

Overview
NameCF832524
Unique NameCF832524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7951 contig Csv1_Contig7951:426..1149. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB5_XENTR (Serpin B5 OS=Xenopus tropicalis GN=serpinb5 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 67/241 (27.80%), Postives = 114/241 (47.30%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFK--VLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDH-------HLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            GS D +T++I   A  FKG W  TF+ S+TK+ DFH+    +  V  M  +    +   +  K  VL +P++     + FSM   LP   +   T L+K+  +  F  +        + + +V+V    +P+FK+    ++            F+ E    +EM +S   K + +S   QK+ IEV+E+GTE         V     L +K +F+ADHPF++++R + T  ++  G    P
Sbjct:  151 GSCDENTKIIMLGAASFKGKWVYTFNKSETKEMDFHINKKETKPVQMMHLEARLSIGYINELKTMVLEMPFQ----SKHFSMLILLPKDIEDDSTGLKKLEQDMTFEKYTHWTNPSMMANSKVKVS---LPKFKMENSYDLKDMLKSLGINDAFNEEASDFSEMTES---KGISISQAIQKACIEVDEDGTESAD------VSMERRLMNKEEFLADHPFIYILRHNKTRTIIMLGRYCGP 375          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: ILEUB_MOUSE (Leukocyte elastase inhibitor B OS=Mus musculus GN=Serpinb1b PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.978e-18
Identity = 77/243 (31.69%), Postives = 118/243 (48.56%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKN---QFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLP----DAKDGLPTLLEK--MGSESKFLDH-HLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTV-VLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            G  D+ T+L+  NA+YFKG W E F + +T +  F L    +  V  M  KK     ++S     KVL +PY+ GE     SM   LP    D   GL  + E+  +G   ++  H +L +  V V   ++PRFK+     ++           FS    G A++      ++L+VS I  KSF++VNE+GTE        + VL   + + +  F  DHPF+F IR + T  ++F G V +P
Sbjct:  151 GVVDSMTKLVLVNAIYFKGIWEEQFMTRETINAPFRLNKKDTKTVKMMYQKKKFPFGYISDLK-CKVLEMPYQGGE----LSMVILLPEDIEDESTGLKKIEEQLTLGKLHEWTKHENLRNIDVHV---KLPRFKMEESYILNSNLCCLGVQDLFS---SGKADLSGMSGSRDLFVSKIVHKSFVDVNEQGTEAAAATGGIIQVLCEKMPTPQEVFTVDHPFLFFIRHNPTANMIFFGRVCSP 382          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPI3_LONON (Serine protease inhibitor 3/4 (Fragment) OS=Lonomia obliqua PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18
Identity = 62/186 (33.33%), Postives = 90/186 (48.39%), Query Frame = 2
Query:    2 PGSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM--TSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTE 553
            P S D+ TR +  NALYFKG+W   FD   T D  FH+ N  +I+VP M  + + +   S     K++ +PY+  E     S+   LP+  DG+  LLEK+               ++V D  +P+FKI   +++            F+G    L  ++       LYVS   QK+FIEVNEEG E
Sbjct:  174 PNSLDDYTRAVLVNALYFKGSWKNKFDKESTIDRPFHVDNTKTIQVPTMHRSGQYSYGESRELNAKIIEMPYEGDET----SLVIVLPNTVDGIHNLLEKLKDPKVLSRVEKDMHEIDV-DVYVPKFKIETTTDLKKVLQNMNIKKLFNGSEARLDYLLKK--SDALYVSEAVQKAFIEVNEEGAE 352          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: NEUS_CHICK (Neuroserpin OS=Gallus gallus GN=SERPINI1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18
Identity = 72/238 (30.25%), Postives = 111/238 (46.64%), Query Frame = 2
Query:   23 TRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF-DG-------FKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLD--HHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPLA 706
            T L+  NA+YFKG W   F    T+ + F   +   +++P M  +   +   F DG       ++VL +PY+  E     SM   L   +  L TL E +   S   +  + +  Q+VEV    +PRF +    ++            FS     L  M D+   K LY++  F K+F+EVNEEG+E         + R  VL  ++  + DHPF F++R   TG V+F G V++P A
Sbjct:  176 THLVLINAIYFKGNWKSQFRPENTRTFSFTKDDETEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDE----ISMMIVLSRQEVPLVTL-EPLVKASLINEWANSVKKQKVEV---YLPRFTVEQEIDLKDVLKGLGITEVFS-RSADLTAMSDN---KELYLAKAFHKAFLEVNEEGSEAAAASGMIAISRMAVLYPQV--IVDHPFFFLVRNRRTGTVLFMGRVMHPEA 399          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB10_CALMO (Serpin B10 OS=Callicebus moloch GN=SERPINB10 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.757e-18
Identity = 67/235 (28.51%), Postives = 111/235 (47.23%), Query Frame = 2
Query:    8 SADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLP--YKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGD--FRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            S  ++TR++  NALYFKG W   F    T +  F +    S  V  M  K+   +   +  + LGL   YK  +     S++  LP+  +GL  L + +  E   L     +  +EV D    +P+FK+    ++            FS      + M  +   +NL++S++F K+F+E++E+GTE        +  R  V S  I+F A+HPF+F IR + T  ++F G   +P
Sbjct:  174 SVGSTTRMVLVNALYFKGIWEHQFLVQNTTEKPFRINETTSKPVQMMFMKEKLQIFHIEKPQALGLQLYYKSCD----LSLFILLPEDINGLEQLEKAITYEK--LSKWTSADMMEVYDVQLHLPKFKLEESYDLKSTLSSMGMSDAFSESEADFSGMSSA---RNLFLSNVFHKAFVEIDEQGTEAAAGSGSEISFRIKVPS--IEFNANHPFLFFIRHNKTNNILFYGRFCSP 397          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: NEUS_RAT (Neuroserpin OS=Rattus norvegicus GN=Serpini1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.518e-18
Identity = 68/241 (28.22%), Postives = 109/241 (45.23%), Query Frame = 2
Query:    2 PGSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF-DG-------FKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            PG  D  T L   NA+YFKG W   F    T+ + F   +   +++P M  +   +   F DG       ++VL +PY+  E     SM   L   +  L TL   +  + + ++    S + +  +  +PRF +    ++            F  +   L  M D    K L++S    KSFIEVNEEG+E         + R  VL  ++  + DHPF+F+I+   TG ++F G V++P
Sbjct:  169 PGDFDAVTHLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDE----ISMMLVLSRQEVPLATLEPLL--KPQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDILKALGVTEIFI-KDANLTAMSDK---KELFLSKAVHKSFIEVNEEGSEAAVASGMIAISRMAVLFPQV--IVDHPFLFLIKNRKTGTILFMGRVMHP 397          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: Y2246_METAC (Uncharacterized serpin-like protein MA_2246 OS=Methanosarcina acetivorans GN=MA_2246 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.282e-17
Identity = 72/239 (30.13%), Postives = 109/239 (45.61%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEK---MGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKID----FVADHPFVFMIREDMTGLVMFTGHVLNP 700
            G     TRL+  N +YF G W + FD   T+   F L NG    V  M   +          K+L LPYK G++    SMY  LP  K+   T LE    +   SK  ++      VEV    IP+F     +E+            F+      + +      K+L +S I+ ++F++V+E+GTE            +I+L ++I+    F ADHPF+FMI +  TG ++F G V +P
Sbjct:  200 GEIGPDTRLVITNTIYFNGTWVKEFDPDITRTRSFTLSNGDEKSVSTMRIVEKFNYGEDQKAKILELPYK-GDN---LSMYIVLP--KENNITELENNFTLKYYSKLKENMSTGDYVEVW---IPKFTFKTEAELKSPLIEMGVVDAFNPNAANFSGITPD---KSLAISEIYHQAFVDVHEKGTEA------AAATGAIILEEEIEYTWEFKADHPFLFMIEDKRTGCILFIGKVESP 420          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB9_HUMAN (Serpin B9 OS=Homo sapiens GN=SERPINB9 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 76/242 (31.40%), Postives = 113/242 (46.69%), Query Frame = 2
Query:    2 PGSA-DNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDG---FKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTL-----LEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            PGS+ D  TRL+  NA+YFKG WNE FD + T++  F  +N    +   M  ++  F  A  G    ++L LPY     ++  S+   LPD    L T+      EK+ + +K     + S  VEV    +P+FK+    ++            F     G A++      ++L +S    KSF+EVNEEGTE        VV    + S    F ADHPF+F IR +    ++F G   +P
Sbjct:  149 PGSSIDAETRLVLVNAIYFKGKWNEPFDETYTREMPFK-INQEEQRPVQMMYQEATFKLAHVGEVRAQLLELPYA----RKELSLLVLLPDDGVELSTVEKSLTFEKLTAWTK--PDCMKSTEVEV---LLPKFKLQEDYDMESVLRHLGIVDAFQ---QGKADLSAMSAERDLCLSKFVHKSFVEVNEEGTEAAAASSCFVVAECCMESGP-RFCADHPFLFFIRHNRANSILFCGRFSSP 376          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: ANT3_PONAB (Antithrombin-III OS=Pongo abelii GN=SERPINC1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 69/234 (29.49%), Postives = 108/234 (46.15%), Query Frame = 2
Query:    2 PGSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSK-KNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            P + +  T L+  N +YFKG W   F    T+   F+  +G S     M  + K ++    +G +VL LP+K G+D    +M   LP  +  L  + +++  E   L   L      +    +PRF+I  G  +            FS E   L  +V +    +LYVS  F K+F+EVNEEG+E        +  RS+   +++ F A+ PF+  IRE     ++F G V NP
Sbjct:  236 PEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFK-GDD---ITMVLILPKPEKSLAKVEKELTPE--VLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIV-AEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSL-NPNRVTFKANRPFLVFIREVPLNTIIFMGRVANP 461          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: ANT3_BOVIN (Antithrombin-III OS=Bos taurus GN=SERPINC1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17
Identity = 69/234 (29.49%), Postives = 109/234 (46.58%), Query Frame = 2
Query:    2 PGSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSK-KNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            P + +  T L+  N +YFKG W   F    T+   F+  +G S  V  M  + K ++    +  +VL LP+K G+D    +M   LP  +  L  + +++  +   L   L      +    +PRF+I     V            FS E   L  +V +    +LYVS  F K+F+EVNEEG+E       ++  RS+  SD++ F A+ P + +IRE     ++F G V NP
Sbjct:  237 PQAINEFTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSVLMMYQESKFRYRRVAESTQVLELPFK-GDD---ITMVLILPKLEKTLAKVEQELTPD--MLQEWLDELTETLLVVHMPRFRIEDSFSVKEQLQDMGLEDLFSPEKSRLPGIV-AEGRSDLYVSDAFHKAFLEVNEEGSEAAASTVISIAGRSL-NSDRVTFKANRPILVLIREVALNTIIFMGRVANP 462          
The following BLAST results are available for this feature:
BLAST of CF832524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
SPB5_XENTR1.978e-1827.80Serpin B5 OS=Xenopus tropicalis GN=serpinb5 PE=2 S... [more]
ILEUB_MOUSE1.978e-1831.69Leukocyte elastase inhibitor B OS=Mus musculus GN=... [more]
SPI3_LONON4.408e-1833.33Serine protease inhibitor 3/4 (Fragment) OS=Lonomi... [more]
NEUS_CHICK4.408e-1830.25Neuroserpin OS=Gallus gallus GN=SERPINI1 PE=1 SV=1[more]
SPB10_CALMO5.757e-1828.51Serpin B10 OS=Callicebus moloch GN=SERPINB10 PE=3 ... [more]
NEUS_RAT7.518e-1828.22Neuroserpin OS=Rattus norvegicus GN=Serpini1 PE=2 ... [more]
Y2246_METAC1.282e-1730.13Uncharacterized serpin-like protein MA_2246 OS=Met... [more]
SPB9_HUMAN2.187e-1731.40Serpin B9 OS=Homo sapiens GN=SERPINB9 PE=1 SV=1[more]
ANT3_PONAB2.187e-1729.49Antithrombin-III OS=Pongo abelii GN=SERPINC1 PE=2 ... [more]
ANT3_BOVIN2.857e-1729.49Antithrombin-III OS=Bos taurus GN=SERPINC1 PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832524 ID=CF832524; Name=CF832524; organism=Citrus sinensis; type=EST; length=724bp
TCCTGGTTCAGCTGACAATTCAACCAGGCTCATCTTTGCAAATGCACTAT
ACTTCAAAGGAGCTTGGAATGAAACATTTGATTCATCAAAGACAAAAGAC
TATGACTTTCACCTTCTCAATGGAGGCTCCATTAAAGTGCCTTTCATGAC
TAGCAAGAAGAATCAGTTTGTGAGTGCCTTTGATGGTTTCAAAGTTTTAG
GGCTTCCTTACAAACAAGGTGAGGATAAACGCCGTTTCTCCATGTACTTT
TTCCTTCCGGATGCAAAAGATGGGCTGCCAACTTTACTAGAGAAGATGGG
ATCTGAATCTAAGTTTTTAGACCACCACCTTCCATCCCAAAGAGTAGAAG
TGGGCGACTTCAGGATTCCTAGGTTTAAGATTTCTTTTGGGAGTGAAGTT
TCTAAAGTCCTCAAGGGATTAGGACTAGTGTTGCCTTTTTCTGGTGAAGG
AGGTGGTTTGGCAGAGATGGTGGATTCCCCTGTGGGTAAGAACCTATATG
TTTCAAGTATCTTCCAGAAGTCCTTCATAGAAGTTAATGAAGAAGGAACG
GAAGCTGCAGCTGCTTCGGCAGCTACTGTAGTACTTAGGTCGATAGTTCT
TTCAGATAAGATAGATTTTGTAGCTGACCACCCATTTGTGTTCATGATAA
GAGAAGACATGACTGGTTTGGTGATGTTCACTGGTCATGTCCTCAATCCT
CTTGCTGGCTGATTAATACTCATA
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