CF832524

Overview
NameCF832524
Unique NameCF832524
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length724
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7951 contig Csv1_Contig7951:426..1149. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: ANT3_HUMAN (Antithrombin-III OS=Homo sapiens GN=SERPINC1 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.731e-17
Identity = 71/235 (30.21%), Postives = 108/235 (45.96%), Query Frame = 2
Query:    2 PGSADNS-TRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSK-KNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            P  A N  T L+  N +YFKG W   F    T+   F+  +G S     M  + K ++    +G +VL LP+K G+D    +M   LP  +  L  + +++  E   L   L      +    +PRF+I  G  +            FS E   L  +V +    +LYVS  F K+F+EVNEEG+E        +  RS+   +++ F A+ PF+  IRE     ++F G V NP
Sbjct:  235 PSEAINELTVLVLVNTIYFKGLWKSKFSPENTRKELFYKADGESCSASMMYQEGKFRYRRVAEGTQVLELPFK-GDD---ITMVLILPKPEKSLAKVEKELTPE--VLQEWLDELEEMMLVVHMPRFRIEDGFSLKEQLQDMGLVDLFSPEKSKLPGIV-AEGRDDLYVSDAFHKAFLEVNEEGSEAAASTAVVIAGRSL-NPNRVTFKANRPFLVFIREVPLNTIIFMGRVANP 461          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB6_BOVIN (Serpin B6 OS=Bos taurus GN=SERPINB6 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.312e-17
Identity = 67/237 (28.27%), Postives = 106/237 (44.73%), Query Frame = 2
Query:    8 SADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFD--GFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLP----SQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            S +  TRL+  NA+YFKG W+  F+   T++  F +       V  M  K    ++       ++L LPY   E     +M   LP     L T +EK  +  KF+    P     + VEV    +PRF +    ++            F       + M     G+ L++S +  KSF+EV EEGTE        V++R +++  +  F A+HPF+F I+   TG ++F G   +P
Sbjct:  155 SVNPMTRLVLVNAIYFKGNWDTQFNKEHTEERPFRVSKNVEKPVQMMFKKSTCKITYIGEISTQILVLPYVGQE----LNMVILLPSESTDLNT-VEKALTYEKFIAWTKPDVMDEEEVEV---FLPRFTLEESYDMEEFLQELGMTDAFEETRADFSGMSS---GRGLHLSKVMHKSFVEVTEEGTEAAAATGAVVMMRCLMVVPR--FNANHPFLFFIQHSKTGAILFCGRFCSP 378          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: NEUS_MOUSE (Neuroserpin OS=Mus musculus GN=Serpini1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.312e-17
Identity = 66/241 (27.39%), Postives = 109/241 (45.23%), Query Frame = 2
Query:    2 PGSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF-DG-------FKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            P   D  T L   NA+YFKG W   F    T+ + F   +   +++P M  +   +   F DG       ++VL +PY+  E     SM   L   +  L TL   +  +++ ++    S + +  +  +PRF +    ++            F  +   L  M D    K L++S    KS IEVNEEG+E         + R  VL  ++  + DHPF+++IR   +G+++F G V+NP
Sbjct:  169 PEDFDGVTNLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDE----ISMMLALSRQEVPLATLEPLL--KAQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDILKALGVTEIFI-KDANLTAMSDK---KELFLSKAVHKSCIEVNEEGSEAAAASGMIAISRMAVLYPQV--IVDHPFLYLIRNRKSGIILFMGRVMNP 397          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: Y1782_PYRKO (Uncharacterized serpin-like protein TK1782 OS=Pyrococcus kodakaraensis GN=TK1782 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16
Identity = 68/230 (29.57%), Postives = 105/230 (45.65%), Query Frame = 2
Query:   23 TRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKID-FVADHPFVFMIREDMTGLVMFTGHVLNPLAG 709
            TRL+  NA+YFK  W+  F +S T++  FH  N G++ VP M           D  + L LPY +GE   R  M   LP  K+G    +E   S    +++ L + R E     +P+F+     ++            F      + +      G+NL +  +  KSFI V E GTE       T+ + + +   +   F ADHPF+F I +  TG ++F G ++NP  G
Sbjct:  210 TRLVITNAVYFKANWSSRFRASDTRNETFHAPN-GTVIVPMMHQTGEFPYFENDDLQALELPY-EGE---RLGMLIILP--KEGKFEKVEGNLSAGS-IENILKNMREEKVKVALPKFRFEASYKLRDVLMDMGMKRAFL-----VPDFSGISNGENLAIEDVVHKSFISVAENGTEAAAATAVTLTMNAPMQEKEPKIFKADHPFIFFIYDRETGTILFMGRMMNPKDG 426          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB10_CHICK (Heterochromatin-associated protein MENT OS=Gallus gallus GN=SERPINB10 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16
Identity = 67/237 (28.27%), Postives = 108/237 (45.57%), Query Frame = 2
Query:   20 STRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGS--IKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPD-AKDGLPTLLEKMGSE------SKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNPL 703
            +TRLI  NA+YFK  W   F + KT    F L    S  +K+ +M       +     FK++ LPY     KR  SM+  LPD  KDG  T LE++  E      S++ D  + ++ +   D  +P+F +    ++            F+        M D    K+L +S +  +SF+ V+E+GTE        +   + V++  + F  DHPF F IR + +  ++F G    P+
Sbjct:  184 TTRLILVNAIYFKAEWEVKFQAEKTSIQPFRLSKNKSKPVKMMYMRDTFPVLIMEKMNFKMIELPYV----KRELSMFILLPDDIKDGT-TGLEQLERELTYERLSEWADSKMMTETLV--DLHLPKFSLEDRIDLRDTLRNMGMTTAFT-TNADFRGMTDK---KDLAISKVIHQSFVAVDEKGTEAAAATAVIISFTTSVINHVLKFKVDHPFHFFIRHNKSKTILFFGRFCCPV 409          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: NEUS_HUMAN (Neuroserpin OS=Homo sapiens GN=SERPINI1 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16
Identity = 64/241 (26.56%), Postives = 108/241 (44.81%), Query Frame = 2
Query:    2 PGSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAF-DG-------FKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            P   D +T L   NA+YFKG W   F    T+ + F   +   +++P M  +   +   F DG       ++VL +PY+  E     SM   L   +  L TL   +  +++ ++    S + +  +  +PRF +    ++            F  +    A +      K +++S    KSF+EVNEEG+E         + R  VL  ++  + DHPF F+IR   TG ++F G V++P
Sbjct:  169 PRDFDAATYLALINAVYFKGNWKSQFRPENTRTFSFTKDDESEVQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGDE----ISMMLVLSRQEVPLATLEPLV--KAQLVEEWANSVKKQKVEVYLPRFTVEQEIDLKDVLKALGITEIFIKD----ANLTGLSDNKEIFLSKAIHKSFLEVNEEGSEAAAVSGMIAISRMAVLYPQV--IVDHPFFFLIRNRRTGTILFMGRVMHP 397          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: ILEU_XENTR (Leukocyte elastase inhibitor OS=Xenopus tropicalis GN=serpinb1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.418e-16
Identity = 68/240 (28.33%), Postives = 114/240 (47.50%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHL--LNGGSIKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSE------SKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            G+ ++ T+L+  NA+YFKG W + F +  TKD  F L      ++K+ +   K           +VL LPY   E     SM   LPD  +   T L+++  E      +++ ++ +P   ++V    +P+FK+    ++            F      L+ M  S    +LY+S +  KSF+EVNEEGTE       +  +  + L  + +F A+HPF+F IR + T  ++F G   +P
Sbjct:  152 GAVNSFTKLVLVNAIYFKGDWAKKFKAEHTKDMPFQLNKKEQKTVKMMYQMEKLPFNYIPEINCRVLELPYVDYE----LSMVIVLPDNINDDTTGLQQLEKELSLEKINEWTENMMP---IDV-HVHLPKFKLEDSYKLKSQLAGMGMADLFEAGSADLSGMSGS---NDLYLSEVIHKSFVEVNEEGTE---AAAASAGIAMMCLMREEEFNANHPFLFFIRHNATKSILFFGRYSSP 377          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB13_MOUSE (Serpin B13 OS=Mus musculus GN=Serpinb13 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.852e-16
Identity = 67/239 (28.03%), Postives = 107/239 (44.77%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFM---TSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFLD----HHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            GS ++ST+L+  N +YFKG W+  F    TK+ DF L    S  V  M   +S    F+      K++G+PYK  +     SM+  LP+  DGL  +++KM  E K ++     HL  +RV   D R+PR ++    +             FS      A+         L+  +   +SF+ V EEG E        + + S    + +    +HPF+F IR   +  ++F G   +P
Sbjct:  166 GSLNSSTKLVLINTVYFKGLWDREFKKEHTKEEDFWLNKNLSKPVQMMALCSSFNFTFLEDLQA-KIVGIPYKNND----ISMFVLLPNDIDGLEKIMDKMSPE-KLVEWTSPGHLEQRRV---DLRLPRLQVEETYDQEPVLEAVGIHSAFSEH----ADYSGMSARSGLHAQNFLHRSFLVVTEEGVEATAGTGVGLKVSSAASCELVH--CNHPFLFFIRHRESDSILFFGKFSSP 389          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB8_HUMAN (Serpin B8 OS=Homo sapiens GN=SERPINB8 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 72/237 (30.38%), Postives = 104/237 (43.88%), Query Frame = 2
Query:    5 GSADNSTRLIFANALYFKGAWNETFDSSKTKDYDFHL-LNGGSIKVPFMTSKKNQFVSAFDGFKVLGLPYKQGEDKRRFSMYFFLPDAKDGLPTLLEKMGSESKFL----DHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            G+ D  T+L+  NA+YFKG WNE FD   T+   F       ++++ F  +K     +     +VL LPY + E     SM   LPD    L  ++EK  +  KF        L   +V+V    +PR K+    ++            F       A+       KN+ +S +  K F+EVNEEGTE        VV  S     +  F ADHPF+F IR   T  ++F G   +P
Sbjct:  151 GTVDPLTKLVLVNAIYFKGKWNEQFDRKYTRGMLFKTNEEKKTVQMMFKEAKFKMGYADEVHTQVLELPYVEEE----LSMVILLPDDNTDL-AVVEKALTYEKFKAWTNSEKLTKSKVQV---FLPRLKLEESYDLEPFLRRLGMIDAFD---EAKADFSGMSTEKNVPLSKVAHKCFVEVNEEGTE--AAAATAVVRNSRCSRMEPRFCADHPFLFFIRHHKTNCILFCGRFSSP 374          
BLAST of CF832524 vs. ExPASy Swiss-Prot
Match: SPB12_HUMAN (Serpin B12 OS=Homo sapiens GN=SERPINB12 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 70/232 (30.17%), Postives = 101/232 (43.53%), Query Frame = 2
Query:   23 TRLIFANALYFKGAWNETFDSSKTKDYDFHLLNGGSIKVPFMTSKKNQFVSAFDGFK--VLGLPYKQGEDKRRFSMYFFLPD-AKD---GLPTLLEKMGSESKFLDHHLPSQRVEVGDFRIPRFKISFGSEVSXXXXXXXXXXPFSGEGGGLAEMVDSPVGKNLYVSSIFQKSFIEVNEEGTEXXXXXXXTVVLRSIVLSDKIDFVADHPFVFMIREDMTGLVMFTGHVLNP 700
            T L+  NA+YFK  W   FD   T D  F L    +  V  MT K    +   +  K  +L + Y +G    + SM+  LP  +KD   GL  L  K+  E         +   E      PRF +    +++           F      L  +  SP   NLY+S I  K+F+EV+E GT+        V  RS  L   ++F A+HPF+F IR + T  ++F G V +P
Sbjct:  183 TVLVLVNAVYFKAKWETYFDHENTVDAPFCLNANENKSVKMMTQKGLYRIGFIEEVKAQILEMRYTKG----KLSMFVLLPSHSKDNLKGLEELERKITYEKMVAWSSSENMSEESVVLSFPRFTLEDSYDLNSILQDMGITDIFDETRADLTGISPSP---NLYLSKIIHKTFVEVDENGTQAAAATGAVVSERS--LRSWVEFNANHPFLFFIRHNKTQTILFYGRVCSP 405          
The following BLAST results are available for this feature:
BLAST of CF832524 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 131
Match NameE-valueIdentityDescription
ANT3_HUMAN3.731e-1730.21Antithrombin-III OS=Homo sapiens GN=SERPINC1 PE=1 ... [more]
SPB6_BOVIN8.312e-1728.27Serpin B6 OS=Bos taurus GN=SERPINB6 PE=2 SV=1[more]
NEUS_MOUSE8.312e-1727.39Neuroserpin OS=Mus musculus GN=Serpini1 PE=1 SV=1[more]
Y1782_PYRKO1.418e-1629.57Uncharacterized serpin-like protein TK1782 OS=Pyro... [more]
SPB10_CHICK1.418e-1628.27Heterochromatin-associated protein MENT OS=Gallus ... [more]
NEUS_HUMAN1.418e-1626.56Neuroserpin OS=Homo sapiens GN=SERPINI1 PE=1 SV=1[more]
ILEU_XENTR1.418e-1628.33Leukocyte elastase inhibitor OS=Xenopus tropicalis... [more]
SPB13_MOUSE1.852e-1628.03Serpin B13 OS=Mus musculus GN=Serpinb13 PE=2 SV=1[more]
SPB8_HUMAN3.159e-1630.38Serpin B8 OS=Homo sapiens GN=SERPINB8 PE=1 SV=2[more]
SPB12_HUMAN4.125e-1630.17Serpin B12 OS=Homo sapiens GN=SERPINB12 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01P21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832524 ID=CF832524; Name=CF832524; organism=Citrus sinensis; type=EST; length=724bp
TCCTGGTTCAGCTGACAATTCAACCAGGCTCATCTTTGCAAATGCACTAT
ACTTCAAAGGAGCTTGGAATGAAACATTTGATTCATCAAAGACAAAAGAC
TATGACTTTCACCTTCTCAATGGAGGCTCCATTAAAGTGCCTTTCATGAC
TAGCAAGAAGAATCAGTTTGTGAGTGCCTTTGATGGTTTCAAAGTTTTAG
GGCTTCCTTACAAACAAGGTGAGGATAAACGCCGTTTCTCCATGTACTTT
TTCCTTCCGGATGCAAAAGATGGGCTGCCAACTTTACTAGAGAAGATGGG
ATCTGAATCTAAGTTTTTAGACCACCACCTTCCATCCCAAAGAGTAGAAG
TGGGCGACTTCAGGATTCCTAGGTTTAAGATTTCTTTTGGGAGTGAAGTT
TCTAAAGTCCTCAAGGGATTAGGACTAGTGTTGCCTTTTTCTGGTGAAGG
AGGTGGTTTGGCAGAGATGGTGGATTCCCCTGTGGGTAAGAACCTATATG
TTTCAAGTATCTTCCAGAAGTCCTTCATAGAAGTTAATGAAGAAGGAACG
GAAGCTGCAGCTGCTTCGGCAGCTACTGTAGTACTTAGGTCGATAGTTCT
TTCAGATAAGATAGATTTTGTAGCTGACCACCCATTTGTGTTCATGATAA
GAGAAGACATGACTGGTTTGGTGATGTTCACTGGTCATGTCCTCAATCCT
CTTGCTGGCTGATTAATACTCATA
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