CF832525

Overview
NameCF832525
Unique NameCF832525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10082 contig Csv1_Contig10082:640..1477. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 6.410e-54
Identity = 108/182 (59.34%), Postives = 132/182 (72.53%), Query Frame = -1
Query:  293 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 838
            A+FL+VV S ++ KYIGE ARL+RE+F  A+   P IIF+DEIDAIG  R    TS DRE+QRTLM+LL ++DGFD  G VK++ ATNR D+LD ALLRPGR DR IEIPLP+ Q R+ ILKIH   +    +++   V +L EG NGADLR +C EAGM AIR ERD V  EDFMKA+ KL
Sbjct:  213 AHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAIDKL 394          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.372e-54
Identity = 105/201 (52.24%), Postives = 141/201 (70.15%), Query Frame = -1
Query:  242 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL--NEAKKLESSAHYNADFG 838
            A F++VV S ++ KYIGE ARL+ E+F  A++  P IIF+DEIDAIG +R  E T  +RE+ RTLM+LL ++DGFD  G VK+I ATNRPD+LDPALLRPGR DR IE+PLP+ + R+EILK+H   +   G +D   + +L EG +GADL+ + TEAGM AIR  R YV  EDF+KA+ K+  NE K ++    +   +G
Sbjct:  197 ATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLRG-VDLRLIAELTEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAIDKVLGNEKKIIQQIMSHEVIYG 396          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.372e-54
Identity = 106/201 (52.74%), Postives = 141/201 (70.15%), Query Frame = -1
Query:  242 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL--NEAKKLESSAHYNADFG 838
            A F++VV S ++ KYIGE ARL+ E+F  A++  P IIF+DEIDAIG +R  E T  +RE+ RTLM+LL ++DGFD  G VK+I ATNRPD+LDPALLRPGR DR IE+PLP+ + R+EILK+H   + K   +D   + ++ EG +GADL+ + TEAGM AIR  R YV  EDF+KAV K+  NE K L+    +   +G
Sbjct:  200 ATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRM-KLKNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERKLLQQITSHEIIYG 399          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.372e-54
Identity = 101/190 (53.16%), Postives = 139/190 (73.16%), Query Frame = -1
Query:  269 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLES 838
            A F+++ +  ++ K+IGE ARL+RE+F  AR+  P IIF+DEIDAIG RR  + TS DRE+QRTL +LL ++DGFD L  +K+I ATNR D+LDPALLRPGR DR I+IPLP+E+ R EI KIH   +    ++D + + K+ EG +GAD++ +CTEAGM AIR +RD V  +DF+KAV ++   K+ ES
Sbjct:  239 ATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGKKEEES 428          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3)

HSP 1 Score: 210.69 bits (535), Expect = 8.372e-54
Identity = 98/182 (53.85%), Postives = 132/182 (72.53%), Query Frame = -1
Query:  293 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 838
            A F+ V+ S ++ KY+GE AR++RE+F  AR  + C+IF DEIDAIGG RF +G   D E+QRT++EL+NQLDGFD  G +K++MATNRPD LDPAL+RPGRLDRKIE  LP+ + R  I KIHA  ++   +I +E + +L     GA++R+VCTEAGM AIRA R     +DF++AV K+
Sbjct:  235 ACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKV 416          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS7_CAEEL (26S protease regulatory subunit 7 OS=Caenorhabditis elegans GN=rpt-1 PE=1 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.093e-53
Identity = 96/182 (52.75%), Postives = 133/182 (73.08%), Query Frame = -1
Query:  293 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 838
            A F++V+ S ++ KY+GE AR++RE+F  AR  + C+IF DEIDA+GG RF +G   D E+QRT++EL+NQLDGFD  G +K++MATNRPD LDPAL+RPGRLDRK+E  LP+   R  ILKIHA  ++   +I Y+ + +L     GA++R+VCTEAGM AIRA R     +DF++A+ K+
Sbjct:  237 ACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAINKV 418          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.428e-53
Identity = 97/182 (53.30%), Postives = 132/182 (72.53%), Query Frame = -1
Query:  293 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 838
            A F++V+ S ++ KY+GE AR++RE+F  AR  + CI+F DE+DAIGG RF +G   D E+QRT++E++NQLDGFD  G +K++MATNRPD LDPALLRPGRLDRK+E  LP+ + R +I KIH   +    +I +E + +L     GAD+R+VCTEAGM AIRA R  V  +DF+ AV K+
Sbjct:  228 ACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.428e-53
Identity = 97/182 (53.30%), Postives = 132/182 (72.53%), Query Frame = -1
Query:  293 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 838
            A F++V+ S ++ KY+GE AR++RE+F  AR  + CI+F DE+DAIGG RF +G   D E+QRT++E++NQLDGFD  G +K++MATNRPD LDPALLRPGRLDRK+E  LP+ + R +I KIH   +    +I +E + +L     GAD+R+VCTEAGM AIRA R  V  +DF+ AV K+
Sbjct:  228 ACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKV 409          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.865e-53
Identity = 101/199 (50.75%), Postives = 140/199 (70.35%), Query Frame = -1
Query:  254 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSA----HYN 838
            A F++V+ S ++ KY+GE AR++R++F  AR  + CIIF DE+DAIGG RF +G   D E+QRT++EL+NQLDGFD  G +K++MATNRPD LDPALLRPGRLDRK+E  LP+ + R  I  IHA  ++   +I +E + +L     GAD+R+VCTEAGM AIRA R  V  +DF++A+ K+ ++    S+     HYN
Sbjct:  230 AAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLCPNSTGADIRSVCTEAGMFAIRARRKVVSEKDFLEAIDKVIKSYAKFSATSRYMHYN 428          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.181e-53
Identity = 101/189 (53.44%), Postives = 139/189 (73.54%), Query Frame = -1
Query:  272 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLE 838
            A F++VV S ++ K+IGE A L++++F  A++  P IIF+DEIDAI  +R    T  DRE+QRTLM+LL ++DGFD  G VK+I ATNRPD+LDPA+LRPGR DR IE+P P+E+ R+EILKIH   +    +++ E + K+ EG  GA+L+ +CTEAGM+AIR  RDYV  +DF KAV K+ E KK++
Sbjct:  230 ATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK 418          
The following BLAST results are available for this feature:
BLAST of CF832525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
PSMR_METMJ6.410e-5459.34Proteasome-activating nucleotidase OS=Methanoculle... [more]
PSMR_PYRFU8.372e-5452.24Proteasome-activating nucleotidase OS=Pyrococcus f... [more]
PSMR_PYRAB8.372e-5452.74Proteasome-activating nucleotidase OS=Pyrococcus a... [more]
PSMR_METKA8.372e-5453.16Proteasome-activating nucleotidase OS=Methanopyrus... [more]
PRS7_RAT8.372e-5453.8526S protease regulatory subunit 7 OS=Rattus norveg... [more]
PRS7_CAEEL1.093e-5352.7526S protease regulatory subunit 7 OS=Caenorhabditi... [more]
PRS7_SPIOL1.428e-5353.3026S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7_ORYSJ1.428e-5353.3026S protease regulatory subunit 7 OS=Oryza sativa ... [more]
PRS7_DICDI1.865e-5350.7526S protease regulatory subunit 7 OS=Dictyostelium... [more]
PSMR_METJA3.181e-5353.44Proteasome-activating nucleotidase OS=Methanocaldo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02A01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832525 ID=CF832525; Name=CF832525; organism=Citrus sinensis; type=EST; length=838bp
TTTTTTTTTTTTTTTTTGAGAATCGGTGGAAATCACTGAAACCATCAATA
CATTAAAGATGTGCAACAATTTCTGACGTAAATGATTGTTATAATATATA
GAGCATTCCATCGCTCAAAGAACCACTAACTTCACAAATTAAAGCAAGAT
GTTTTAACAAAAATATGAAAACAATTACATCTGAAAAATAACCGCACTGC
CTCAAGATCCTTGGCTCTTTTCCTAAATGTTTTTACTCTTTTCCAAAATC
AGCATTGTAGTGAGCACTTGATTCAAGTTTCTTTGCCTCGTTCAGTTTCC
GGACAGCCTTCATAAAATCTTCGTGGATGACATAATCACGTTCAGCACGG
ATTGCCGACATTCCAGCCTCGGTGCAAACATTTCGGAGATCAGCCCCATT
AAAGCCCTCTGCAAGCTTCACAACAGCCTCATAATCAATCTCACCATGCT
TAGCAATGCCAGCAGCATGAATTTTAAGAATTTCCATTCTTGACTGCTCA
TTTGGCAATGGAATCTCAATTTTCCTATCCAGTCGCCCTGGACGAAGAAG
TGCAGGGTCAAGGACATCAGGTCTGTTAGTGGCCATTATCATTTTAACCT
TCCCAAGCTGATCAAATCCATCAAGCTGATTAAGTAACTCCATCAGTGTC
CTTTGAATTTCACGATCTGCACTGGTTCCTTCACTAAAACGGCGTCCACC
GATGGCATCAATTTCATCCATAAAAATGATGCAGGGTTGATGATCACGTG
CATATCCAAACATCTCTCTTATCAACCTTGCACTTTCCCCAATGTACTTA
TCAATAATGGCACTTGAAACCACCTTCAGAAAATTTGC
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