CF832525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PEX6_NEUCR (Peroxisomal biogenesis factor 6 OS=Neurospora crassa GN=pex-6 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.211e-21 Identity = 63/189 (33.33%), Postives = 103/189 (54.50%), Query Frame = -1 Query: 284 NFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSA---DREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN-EQSRMEILKIHAAGIAKHGEIDYEAVV-KLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEA 835 NF V +++ YIGES +R +F ARD +PC++F DE+D++ +R ++G S DR + + L EL G G V +I ATNRPD+LDPALLRPGR D+ + + + + ++ I++ H + +V +L + GAD +C++A + A+ + V + +R+LN A Sbjct: 1051 NFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPFTYTGADFYALCSDAMLKAVTRQATLVDTK-----IRELNAA 1234
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.194e-21 Identity = 55/161 (34.16%), Postives = 93/161 (57.76%), Query Frame = -1 Query: 353 FLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRR-FSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSA 832 FL S+ + +G A IR++F A+ + PC++F+DEID++GG R FS + T+ +LL ++DGF + ++ ATN+ +VLD ALLRPGR D +I + P + R+ +L ++ + ID E + G+ GAD++N+ +A ++A Sbjct: 227 FLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSVGGNRTFSPHHPFANQ---TINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAAIAA 384
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PEX6_RAT (Peroxisome assembly factor 2 OS=Rattus norvegicus GN=Pex6 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 5.477e-21 Identity = 66/192 (34.38%), Postives = 100/192 (52.08%), Query Frame = -1 Query: 263 FLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ-SRMEILKIHAAGIAKHGEIDYEAVVKLA-EGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSA 832 FL V +I+ Y+G+S +RE+F AR PCIIF DE+D++ R G S + R + +LL +LDG V +I ATNRPD+LDPALLRPGR D+ + + ++ S++ +L + V+ GADL ++C++A M+A++ + VR L E + SSA Sbjct: 763 FLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGG-VMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDAMMTALK------------RRVRDLEEGLEPRSSA 941
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: ATD2B_HUMAN (ATPase family AAA domain-containing protein 2B OS=Homo sapiens GN=ATAD2B PE=1 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.477e-21 Identity = 60/154 (38.96%), Postives = 88/154 (57.14%), Query Frame = -1 Query: 347 IDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAG-IAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 805 + K++GES R +R +F A +P IIF DEID + R S I TL+ L+ DG D G++ +I ATNR D +DPAL RPGR DR+ LP++++R IL+IH K + + + G+ GAD++ +CTEA + A+R Sbjct: 476 LSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALM---DGLDNRGEIVVIGATNRLDSIDPALRRPGRFDREFLFNLPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIALR 626
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: MSP1_YEAST (Protein MSP1 OS=Saccharomyces cerevisiae GN=MSP1 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 7.153e-21 Identity = 61/166 (36.75%), Postives = 92/166 (55.42%), Query Frame = -1 Query: 347 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGI-AKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 838 ANF+ + S+I+DK+ GES +++ MF A QPCIIF+DEID+ E +S D E+ TL E + DG G+V +I ATNR + +D A LR RL ++ + LP R +IL + E D + + +GF+G+DL+ +C EA + A + Sbjct: 152 ANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSF----LRERSSTDHEVTATLKAEFMTLWDGLLNNGRVMIIGATNRINDIDDAFLR--RLPKRFLVSLPGSDQRYKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAK 311
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PEX6_CANGA (Peroxisomal biogenesis factor 6 OS=Candida glabrata GN=PEX6 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.342e-21 Identity = 64/196 (32.65%), Postives = 106/196 (54.08%), Query Frame = -1 Query: 257 NFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK-VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN-EQSRMEILKIHAAGIAKHGEIDYEAVVK-LAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAHY 835 NF V +++ YIGES +R +F ARD +PC+IF DE+D++ +R ++G S + R + +LL +LDG G V +I ATNRPD+LD ALLRPGR D+ I + + + + + I++ +I+++ +V + GAD +C++A + A+ I ++ + V K N+ S Y Sbjct: 778 NFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADTREKQANIMRALTRKFKVSSDINFDELVSDFPFSYTGADFYALCSDAMLKAMTR-----ISKEIDEKVDKYNQDNGTSISIRY 967
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: FIGL1_XENLA (Fidgetin-like protein 1 OS=Xenopus laevis GN=fignl1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.342e-21 Identity = 68/217 (31.34%), Postives = 110/217 (50.69%), Query Frame = -1 Query: 242 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDG--FDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEI-LKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAER---------------DYVIHEDFMKAVRKLNEAKKLESSAHYNADFG 838 A F + +S++ K++GE +++R +F AR HQP +IF+DEID++ +R G +R E L QLDG ++ ++ ATNRP +D A R RL +++ IPLP +R +I + + + E + EA+V A+GF+GAD+ +C EA + IR+ + Y+ + VR K LE ++N FG Sbjct: 441 ATFFSISASSLTSKWVGEGEKMVRALFTVARCHQPAVIFIDEIDSLLSQR---GEGEHESSRRIKTEFLVQLDGATTSSEDRILVVGATNRPQEIDEAARR--RLVKRLYIPLPEASARKQIVVSLMSKEHCSLTEQEVEAIVLQADGFSGADMTQLCREAALGPIRSIQLMDISTITAEQVRPIAYIDFQSAFLVVRPSVSQKDLELYENWNKTFG 652
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: MEI1_CAEEL (Meiotic spindle formation protein mei-1 OS=Caenorhabditis elegans GN=mei-1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.220e-20 Identity = 63/169 (37.28%), Postives = 101/169 (59.76%), Query Frame = -1 Query: 347 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTL-MELLNQLDG----FDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 838 + F V S+ + K+ G+S +++R +F AR + P IIF+DEID +GG+R G S + E R + E L Q+DG FD +V ++ ATN P LD AL R R +++I IPLP+ +R ++++ G K EI+Y+ + EGF+GAD+ ++C A ++ +R Sbjct: 252 STFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQR---GNSGEHEASRRVKSEFLVQMDGSQNKFDS-RRVFVLAATNIPWELDEALRR--RFEKRIFIPLPDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLR 414
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: FIGL1_CAEBR (Fidgetin-like protein 1 OS=Caenorhabditis briggsae GN=figl-1 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.220e-20 Identity = 65/185 (35.14%), Postives = 105/185 (56.76%), Query Frame = -1 Query: 302 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIM--ATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDY--EAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYV--IHEDFMKAV 838 A F + +S++ K++GE +L+R +F AR P +IF+DEID++ R + R I+ E L QLDG + ++++ ATNRP LD A R R +++ I LP SR +I++ G +H D+ E + +L +G++GAD+R +CTEA M IR D + I++D ++AV Sbjct: 375 ATFFNISASSLTSKWVGEGEKLVRALFSVARLKLPSVIFIDEIDSLLSARSESEHESSRRIK---TEFLVQLDGVNTAPDERLLVLGATNRPQELDEAARR--RFQKRLYIALPEPDSRTQIVENLLRG-TRHEITDHNLEKIRRLTDGYSGADMRQLCTEAAMGPIREIGDQIATINKDDIRAV 553
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: SPAST_XENTR (Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.594e-20 Identity = 67/220 (30.45%), Postives = 118/220 (53.64%), Query Frame = -1 Query: 242 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR------------AERDYVIHEDFMKAVRKLN---EAKKLESSAHYNADFG 838 A F + ++++ KY+GE +L+R +F AR+ QP IIF+DE+D++ R A R ++ E L + DG G +V ++ ATNRP LD A+LR R +++ + LPNE++R+ +LK ++K G E + + +L EG++G+D+ + +A + IR +E + + DF+ +++K+ LES +N +FG Sbjct: 388 ATFFNISAASLTSKYVGEGEKLVRALFSVARELQPSIIFIDEVDSLLCERREGEHDASRRLK---TEFLIEFDGVQSGGDDRVLVMGATNRPQELDDAVLR--RFTKRVYVSLPNEETRLLLLK---NLLSKQGNPLNEKELTQLSRLTEGYSGSDITALAKDAALGPIRELKPEQVKNMAASEMRNIKYSDFLSSLKKIKCSVSPSTLESYIRWNKEFG 599 The following BLAST results are available for this feature:
BLAST of CF832525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832525 ID=CF832525; Name=CF832525; organism=Citrus sinensis; type=EST; length=838bpback to top |