CF832525

Overview
NameCF832525
Unique NameCF832525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10082 contig Csv1_Contig10082:640..1477. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 7.087e-53
Identity = 101/182 (55.49%), Postives = 134/182 (73.63%), Query Frame = -1
Query:  293 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 838
            A F++VV S ++ K+IGE ARL+ E+F  A++  P IIF+DEIDAIG +R  E T  +RE+ RTLM+LL ++DGFD  G VK+I ATNRPD+LDPALLRPGR DR IE+PLPN +SR+EILKIH   +   G +D   + ++ EG +GADL+ +  EAGM AIR  R+YV  EDF+KA+ K+
Sbjct:  199 ATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPSGNVKIIAATNRPDILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNLKG-VDLRIIAEMTEGASGADLKAITMEAGMFAIRDRREYVTQEDFLKAIEKV 379          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 9.256e-53
Identity = 98/195 (50.26%), Postives = 137/195 (70.26%), Query Frame = -1
Query:  257 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRK-LNEAKKLESSAHY 838
            A F++V+ S ++ KY+GE AR++RE+F  AR  + CIIF DEIDA+GG RF +G   D E+QRT++EL+ QLDGFD  G +K++ ATNRP+ LDPALLRPGR+DRK+E  LP+ + R  I +IH+  ++    I +E + +L     GA+LR+VCTEAGM AIRA R     +DF+KAV K ++  KK  S++ Y
Sbjct:  269 ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALLRPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYKKFSSTSRY 463          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.579e-52
Identity = 101/187 (54.01%), Postives = 136/187 (72.73%), Query Frame = -1
Query:  278 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 838
            A F++VV S ++ K+IGE ARL+ E+F  A++  P IIF+DEIDAIG +R  E T  +RE+ RTLM+LL ++DGFD  G VK+I ATNRPD+LDPALLRPGR DR IE+PLP+ Q R+EILK+H   +   G +D   + ++ EG +GADL+ + TEAGM AIR  R YV  +DF+KAV K+  ++K
Sbjct:  198 ATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNLKG-VDLRVIAEITEGASGADLKAIATEAGMFAIRDRRTYVTQDDFLKAVDKVIGSEK 383          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS7_SCHPO (26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces pombe GN=rpt1 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.579e-52
Identity = 99/195 (50.77%), Postives = 138/195 (70.77%), Query Frame = -1
Query:  257 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHY 838
            A F++V+ S ++ KY+GE AR++RE+F  AR  + CIIF DEIDAIGG RF +G   D E+QRT++EL+ QLDGFD  G +K++ ATNRP+ LD AL+RPGR+DRK+E  LP+ + R  IL+IHA  +A   +I +E + +L     GA+LR+VCTEAGM AIRA R     +DF+ AV+K+ +  +K  S+A Y
Sbjct:  239 ATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEAGMFAIRARRRVATEKDFLDAVQKVVKGNQKFSSTADY 433          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 2.062e-52
Identity = 100/187 (53.48%), Postives = 137/187 (73.26%), Query Frame = -1
Query:  278 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 838
            A+F++VV S ++ K+IGE A+L+R++F  A++  PCIIF+DEIDA+  +R    T  DRE+QRTLM+LL ++DGFD  G VK+I ATNRPD+LDPA+LRPGR DR IEI +P+E  R+EILKIH   +   G +D   V K+AE   GADL+ VCTEAGM AIR ER+++  +DF +A+ K+   K+
Sbjct:  208 ASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLKG-VDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAISKITGKKE 393          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.693e-52
Identity = 100/187 (53.48%), Postives = 137/187 (73.26%), Query Frame = -1
Query:  278 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 838
            A+F++VV S ++ K+IGE A+L+R++F  A++  PCIIF+DEIDA+  +R    T  DRE+QRTLM+LL ++DGFD  G VK+I ATNRPD+LDPA+LRPGR DR IEI +P+E  R++ILKIH   +   G +D   V KLAE   GADL+ VCTEAGM AIR ER+++  +DF +A+ K+   K+
Sbjct:  208 ASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNLKG-VDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKE 393          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 4.594e-52
Identity = 99/187 (52.94%), Postives = 137/187 (73.26%), Query Frame = -1
Query:  278 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 838
            A+F++VV S ++ K+IGE A+L+R++F  A++  PCIIF+DEIDA+  +R    T  DRE+QRTLM+LL ++DGFD  G VK+I ATNRPD+LDPA+LRPGR DR IEI +P+E  R++ILKIH   +   G +D   V K+AE   GADL+ VCTEAGM AIR ER+++  +DF +A+ K+   K+
Sbjct:  208 ASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNLKG-VDLREVAKIAENMVGADLKAVCTEAGMFAIREEREFIKMDDFREAITKITGKKE 393          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 4.594e-52
Identity = 101/197 (51.27%), Postives = 138/197 (70.05%), Query Frame = -1
Query:  251 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEA-KKLESSAHYNA 838
            A F++VV S ++ KYIGE AR++RE+F  AR  + CI+F DEIDAIGG RF +G  +D E+QRT++E+L QLDGFD  G +K++MATNRPD+LDPALLRPGRLDRK+E  LP+ + R +I KIH   ++   +I +E +  L     GAD+R+VC EAGM AI A R  V  +DF+ AV K+ +  +K  ++  Y A
Sbjct:  265 ACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALLRPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLCPNSTGADIRSVCIEAGMYAIGARRKSVTEKDFLDAVNKVVKGYQKFSATPKYMA 461          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.000e-52
Identity = 100/187 (53.48%), Postives = 136/187 (72.73%), Query Frame = -1
Query:  278 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 838
            A+F++VV S ++ K+IGE A+L+R++F  A++  PCIIF+DEIDA+  +R    T  DRE+QRTLM+LL ++DGFD  G VK+I ATNRPD+LDPA+LRPGR DR IEI +P+E  R+EILKIH   +     +D   V KLAE   GADL+ VCTEAGM AIR ER+++  +DF +A+ K+   K+
Sbjct:  208 ASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKM-NLKNVDLREVAKLAENMVGADLKAVCTEAGMFAIREEREFIKMDDFKEAISKITGKKE 393          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.023e-51
Identity = 101/187 (54.01%), Postives = 134/187 (71.66%), Query Frame = -1
Query:  278 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKK 838
            A F++VV S ++ K+IGE ARL+ E+F  A++  P IIF+DEIDAIG +R  E T  +RE+ RTLM+LL ++DGFD  G VK+I ATNRPD+LDPALLRPGR DR IE+PLP+ + R+EILK+H   +     +D   +  + EG +GADL+ + TEAGM AIR  R YV  EDF+KAV K+  A+K
Sbjct:  198 ATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFRGRLEILKVHTRKMNLR-NVDLSIIADITEGASGADLKAIATEAGMFAIRDRRTYVTQEDFLKAVDKVLGAEK 383          
The following BLAST results are available for this feature:
BLAST of CF832525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
PSMR_THEON7.087e-5355.49Proteasome-activating nucleotidase OS=Thermococcus... [more]
PRS7_YEAST9.256e-5350.2626S protease regulatory subunit 7 homolog OS=Sacch... [more]
PSMR_PYRKO1.579e-5254.01Proteasome-activating nucleotidase OS=Pyrococcus k... [more]
PRS7_SCHPO1.579e-5250.7726S protease regulatory subunit 7 homolog OS=Schiz... [more]
PSMR_METMP2.062e-5253.48Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM62.693e-5253.48Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_METM54.594e-5252.94Proteasome-activating nucleotidase OS=Methanococcu... [more]
PRS7B_ARATH4.594e-5251.2726S protease regulatory subunit 7 homolog B OS=Ara... [more]
PSMR_METM76.000e-5253.48Proteasome-activating nucleotidase OS=Methanococcu... [more]
PSMR_THEGJ1.023e-5154.01Proteasome-activating nucleotidase OS=Thermococcus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_02A01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832525 ID=CF832525; Name=CF832525; organism=Citrus sinensis; type=EST; length=838bp
TTTTTTTTTTTTTTTTTGAGAATCGGTGGAAATCACTGAAACCATCAATA
CATTAAAGATGTGCAACAATTTCTGACGTAAATGATTGTTATAATATATA
GAGCATTCCATCGCTCAAAGAACCACTAACTTCACAAATTAAAGCAAGAT
GTTTTAACAAAAATATGAAAACAATTACATCTGAAAAATAACCGCACTGC
CTCAAGATCCTTGGCTCTTTTCCTAAATGTTTTTACTCTTTTCCAAAATC
AGCATTGTAGTGAGCACTTGATTCAAGTTTCTTTGCCTCGTTCAGTTTCC
GGACAGCCTTCATAAAATCTTCGTGGATGACATAATCACGTTCAGCACGG
ATTGCCGACATTCCAGCCTCGGTGCAAACATTTCGGAGATCAGCCCCATT
AAAGCCCTCTGCAAGCTTCACAACAGCCTCATAATCAATCTCACCATGCT
TAGCAATGCCAGCAGCATGAATTTTAAGAATTTCCATTCTTGACTGCTCA
TTTGGCAATGGAATCTCAATTTTCCTATCCAGTCGCCCTGGACGAAGAAG
TGCAGGGTCAAGGACATCAGGTCTGTTAGTGGCCATTATCATTTTAACCT
TCCCAAGCTGATCAAATCCATCAAGCTGATTAAGTAACTCCATCAGTGTC
CTTTGAATTTCACGATCTGCACTGGTTCCTTCACTAAAACGGCGTCCACC
GATGGCATCAATTTCATCCATAAAAATGATGCAGGGTTGATGATCACGTG
CATATCCAAACATCTCTCTTATCAACCTTGCACTTTCCCCAATGTACTTA
TCAATAATGGCACTTGAAACCACCTTCAGAAAATTTGC
back to top