CF832525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: VPS4_YEAST (Vacuolar protein sorting-associated protein 4 OS=Saccharomyces cerevisiae GN=VPS4 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18 Identity = 59/165 (35.76%), Postives = 98/165 (59.39%), Query Frame = -1 Query: 347 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGI-AKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 838 + F V SS ++ K++GES +L++++F AR+++P IIF+DE+DA+ G R + A R I+ L+ +N + G D G V ++ ATN P LD A+ R R +R+I IPLP+ +R + +I+ + DY + + EG++G+D+ V +A M IR Sbjct: 192 STFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGV-GNDSQG-VLVLGATNIPWQLDSAIRR--RFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIR 352
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: SPAST_DROVI (Spastin OS=Drosophila virilis GN=spas PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18 Identity = 63/221 (28.51%), Postives = 114/221 (51.58%), Query Frame = -1 Query: 242 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEAVVKLA---EGFNGADLRNVCTEAGMSAIR------------------AERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFG 838 A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G + ++ ++ ATNRP LD A LR R +++ + LP Q+R +L + + K G +D EA+ +LA +G++G+DL + +A + IR E+D+ + +K +R+ + L S ++ D+G Sbjct: 553 ATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPGVQTRELLL---SRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRPITEKDF---HNSLKRIRRSVAPQSLNSYEKWSQDYG 765
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: SPAST_DICDI (Spastin OS=Dictyostelium discoideum GN=DDB_G0287165 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18 Identity = 67/215 (31.16%), Postives = 114/215 (53.02%), Query Frame = -1 Query: 242 FLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG--KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG--EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRA-----------ERDYVIHEDF---MKAVRKLNEAKKLESSAHYNADFG 832 F + SS++ KY+G+ +L+R +F A QP IIF+DEID++ R S + A R ++ E+L Q DG G +V ++ ATNRP+ LD A LR RL ++I + LP ++R++I++ H +H + ++ ++ +G++G DL +C +A IR E + +DF +K +R ++ L+S +N FG Sbjct: 445 FFSISSSSLTSKYVGDGEKLVRALFAVATHFQPSIIFIDEIDSLLTERSSNESEASRRLK---TEILVQFDGARTNGDERVLVMGATNRPEDLDDAALR--RLVKRIYVGLPELETRLQIIQ-HLLVGQRHSLTKQQINSLAEVTQGYSGFDLAALCKDAAYEPIRRLGIGIKDLELNEISLISFKDFANSLKQIRPSVTSQSLKSFEKWNQKFG 653
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: NSF_ARATH (Vesicle-fusing ATPase OS=Arabidopsis thaliana GN=NSF PE=2 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18 Identity = 63/197 (31.98%), Postives = 105/197 (53.30%), Query Frame = -1 Query: 260 IIDKYIGESARLIREMFGYARDHQPC--------IIFMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG----EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSAH 808 ++ K++GE+ + +R++F A Q +I DEIDAI R S +GT I + +LL ++DG + L V +I TNR D+LD ALLRPGRL+ ++EI LP+E R++IL+IH + ++ +I+ + + + ++GA+L V A A+ + + +D K V + N +E H Sbjct: 287 VLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSI---VNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQILQIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKSATSYALNRQ---LSMDDLTKPVEEENIKITMEDFLH 477
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: SPAST_DROPS (Spastin OS=Drosophila pseudoobscura pseudoobscura GN=spas PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.492e-18 Identity = 62/218 (28.44%), Postives = 114/218 (52.29%), Query Frame = -1 Query: 242 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEA---VVKLAEGFNGADLRNVCTEAGMSAIRA------------ERDYVIHEDF---MKAVRKLNEAKKLESSAHYNADFG 838 A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G ++ ++ ATNRP LD A LR R +++ + LP+EQ+R +L + K G +D +A + K+ +G++G+DL + +A + IR ++ +DF +K +R+ + L S +++D+G Sbjct: 572 ATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSERSSGEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPDEQTRELLLN---RLLQKQGSPLDTDALRRLSKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDINAMRHITEKDFHNSLKRIRRSVAQQSLSSYEKWSSDYG 784
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: SPAST_DROMO (Spastin OS=Drosophila mojavensis GN=spas PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.492e-18 Identity = 63/221 (28.51%), Postives = 114/221 (51.58%), Query Frame = -1 Query: 242 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGE-IDYEAVVKLA---EGFNGADLRNVCTEAGMSAIR------------------AERDYVIHEDFMKAVRKLNEAKKLESSAHYNADFG 838 A FL + ++++ KY+G+ +L+R +F AR QP IIF+DE+D++ R S A R ++ + + L G + ++ ++ ATNRP LD A LR R +++ + LP Q+R +L + + K G +D EA+ +LA +G++G+DL + +A + IR E+D+ + +K +R+ + L S ++ D+G Sbjct: 549 ATFLNISAASLTSKYVGDGEKLVRALFAVARHLQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPEGDRIVVLAATNRPQELDEAALR--RFTKRVYVSLPEVQTRELLL---SRLLQKQGSPLDTEALARLAKITDGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRPITEKDF---HNSLKRIRRSVAPQSLNSYEKWSQDYG 761
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: PEX6_ASHGO (Peroxisomal biogenesis factor 6 OS=Ashbya gossypii GN=PEX6 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.948e-18 Identity = 55/165 (33.33%), Postives = 94/165 (56.97%), Query Frame = -1 Query: 350 NFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGK-VKMIMATNRPDVLDPALLRPGRLDRKIEIPLPN-EQSRMEILKIHAAGIAKHGEIDYEAVVKLAE-GFNGADLRNVCTEAGMSAI 835 NF V +++ YIGES +R +F ARD +PC+IF DE+D++ +R ++G S + R + +LL +LDG G + +I ATNRPD+LD ALLRPGR D+ + + + + + + IL+ ++ + + + GAD +C++A ++A+ Sbjct: 783 NFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGG-VMDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQANILRALTRKFTLDPDVSLDDLAASCPFTYTGADFYALCSDAMLNAM 946
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18 Identity = 55/166 (33.13%), Postives = 98/166 (59.04%), Query Frame = -1 Query: 347 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG--EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 838 + F + SS ++ K++GES +L++ +F AR+++P IIF+DEID++ G R + A R I+ + + + G D G + ++ ATN P VLD A+ R R +++I IPLP +R + K+H G ++ E D+ + + +G++GAD+ + +A M +R Sbjct: 194 STFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMRGV-GVDNDG-ILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLH-LGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVR 354
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: VPS4B_MOUSE (Vacuolar protein sorting-associated protein 4B OS=Mus musculus GN=Vps4b PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18 Identity = 53/165 (32.12%), Postives = 96/165 (58.18%), Query Frame = -1 Query: 347 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKH-GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 838 + F + SS ++ K++GES +L++ +F AR+++P IIF+DEID++ G R + A R I+ + + + G D G + ++ ATN P VLD A+ R R +++I IPLP +R + ++H E D++ + + +G++GAD+ + +A M +R Sbjct: 194 STFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGV-GVDNDG-ILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVR 354
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: VPS4B_HUMAN (Vacuolar protein sorting-associated protein 4B OS=Homo sapiens GN=VPS4B PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.544e-18 Identity = 55/166 (33.13%), Postives = 98/166 (59.04%), Query Frame = -1 Query: 347 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG--EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 838 + F + SS ++ K++GES +L++ +F AR+++P IIF+DEID++ G R + A R I+ + + + G D G + ++ ATN P VLD A+ R R +++I IPLP +R + K+H G ++ E D+ + + +G++GAD+ + +A M +R Sbjct: 194 STFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQGV-GVDNDG-ILVLGATNIPWVLDSAIRR--RFEKRIYIPLPEPHARAAMFKLH-LGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVR 354 The following BLAST results are available for this feature:
BLAST of CF832525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 380
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832525 ID=CF832525; Name=CF832525; organism=Citrus sinensis; type=EST; length=838bpback to top |