CF832525

Overview
NameCF832525
Unique NameCF832525
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length838
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10082 contig Csv1_Contig10082:640..1477. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: YCF46_ODOSI (Uncharacterized AAA domain-containing protein ycf46 OS=Odontella sinensis GN=ycf46 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.106e-13
Identity = 54/190 (28.42%), Postives = 91/190 (47.89%), Query Frame = -1
Query:  266 LKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHG--EIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESS 829
            LK+    +    +GES   +R+M   A    PCI+++DE+D       S G S      R L   ++ L   ++   V ++   N  D+L   ++R GR D    + LP  + R EI KIH      +     DY+ + +L+E F+GA++R    EA   A   +R++   +D   A+++L    +LE+S
Sbjct:  288 LKLDVGRLFGGIVGESESRLRQMIDVAETLSPCILWIDEMDKAFSNNDSRGDSGTS--NRVLATFISWLS--EKTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLFDYKKLAQLSESFSGAEIRQSIIEAMYQAFDQQREFTT-DDICLALKQLIPLAQLENS 472          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: FIGN_HUMAN (Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.445e-13
Identity = 59/220 (26.82%), Postives = 111/220 (50.45%), Query Frame = -1
Query:  242 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF--DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKH----GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRA------------ERDYVIHEDFMKAVRKLNEA---KKLESSAHYNADFG 838
            A F K+  S ++ K++GE+ ++I   F  AR  QP +IF+ +ID +   + +E  S    + R   E L QLD        ++ +I AT++P+ +D +L R     +++ IPLP+  +R +I+      +++H     + ++  +V+  EGF+G D+ ++C EA +  + A            +   V ++DF  A  K+  +   K+L+    +N  FG
Sbjct:  545 ATFFKIAGSGLVAKWLGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVNEEHS---PVSRMRTEFLMQLDTVLTSAEDQIVVICATSKPEEIDESLRR--YFMKRLLIPLPDSTARHQII---VQLLSQHNYCLNDKEFALLVQRTEGFSGLDVAHLCQEAVVGPLHAMPATDLSAIMPSQLRPVTYQDFENAFCKIQPSISQKELDMYVEWNKMFG 756          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: FTSH_HELSJ (Cell division protease ftsH homolog OS=Helicosporidium sp. subsp. Simulium jonesii GN=ftsH PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.218e-13
Identity = 46/177 (25.99%), Postives = 80/177 (45.20%), Query Frame = -1
Query:  350 IREMFGYARDHQPCIIFMDEIDAI----GGRRFSEGTSADREIQR--------------------------------TLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAI 772
            + + F YA+   PCI+F DE+D++    GG  F E   A+  +                                  TL++LL + +       + +I ATNR + +DPA++RPGR        LPN   R++  K +AAG++   EI ++ + K   GF+ +D+  +  E+ +  +
Sbjct:  865 LSKAFEYAKSIAPCILFFDEMDSLAPKRGGGYFGENAWAEIRLNNNILPYEFSPLKAPEPQKNKMDKFKTKKVKPRGTLLQLLYECNNLSNEKPILLIGATNRQNEIDPAVIRPGRFSTIYNFSLPNSSERIDFCKFYAAGLSMDKEIPWDYIAKRTVGFSPSDISMLMKESSLYGV 1041          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: FTSH_CHLVU (Cell division protease ftsH homolog OS=Chlorella vulgaris GN=ftsH PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13
Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = -1
Query:  326 SEGTSADREIQRTLM-ELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVI 685
            +E  S   E Q +L+ +LL +LDG      V +  ATNRP+VLDPALLRPGR D+ +++ LP ++ R+EIL+ +   +     + +    +   GF  ADL  +  E+ + AI  + ++ I
Sbjct: 1141 AEYNSKQNEKQVSLLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFYGQTLGYQKTMPWAYFGERTVGFTAADLATLMNESALKAILNQSNHTI 1261          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: YR476_MIMIV (Putative AAA family ATPase R476 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R476 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.364e-13
Identity = 55/210 (26.19%), Postives = 97/210 (46.19%), Query Frame = -1
Query:  254 IIDKYIGESARLIREMFGYARD--------HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAK----HGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRA-------------ERDYVIHEDFMKAVRKLNEAKKLESSAHYN 808
            I +K++G S   IR +F  A+D            ++ +DEIDA+   R   G+  +      + + L ++DG +    +  I  TNR ++LDPA +R GR    I+I LP+++ R++I +IH   + +      ++D   +  + E F+GAD+  +   A + ++                   V  EDF KA +++N  K    S   N
Sbjct:  642 IFNKWVGGSESNIRAIFKPAKDAWKKHGDKSPVYMVVIDEIDAMLPSR--SGSDGNPVRDSVVNQFLAEMDGLEVFNNLICIGITNRLELLDPATIRSGRFGIHIKIDLPDQEGRVKIFQIHTKKLQELNRLSDDVDISKLAVITEEFSGADIEGMVELASVYSLERLNKLDVINDDVINTHGLVTFEDFTKAAKEINHNKNKSDSTKDN 849          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: SUR2_SCHPO (Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12
Identity = 53/175 (30.29%), Postives = 86/175 (49.14%), Query Frame = -1
Query:  347 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLG---------KVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKH--GEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIR 838
            A F  + +S++  KY+G+S +L+R +F  A+     +IF+DEID+I   R   G   +   +R   E L Q                 +V ++ ATN P  +D A  R  R  ++  IPLP +++R + L  H      H   E D E +V L EG++G+D+  +  +A M  +R
Sbjct:  438 ATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARNDSGNEHESS-RRLKTEFLIQWSSLTNAAPDKQTGHSPRVLVLAATNLPWCIDEAARR--RFVKRTYIPLPEKETRYKHLS-HLLHNQVHCLTEEDLEELVNLTEGYSGSDITALAKDAAMGPLR 608          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: YCF2_MESVI (Protein ycf2 OS=Mesostigma viride GN=ycf2 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.558e-12
Identity = 63/225 (28.00%), Postives = 109/225 (48.44%), Query Frame = -1
Query:  239 FLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFS---------------EGTSAD---REIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE---GFNGADLR----NVCTEAGMSAIRAERDY-VIHED-FMKAVRKLNEAKKLESSAHYNADFGK 832
            +L V  S    +  G +   + ++F   ++  PCI+++DEID+I  RR                 EG++ +   +     LM+ L  +DG+ +   + +I ATNR + LD A++RPGR DR+I    P  + R +IL+I          +D      +AE   G NG DLR    N+   + + +   ++   VI+ED F +A+ +++  + + S  +Y   FGK
Sbjct:  406 YLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRN--TKALVDDTTKTMMAERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDRALERVSRIRHIIS--NYELAFGK 626          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: FIGN_DANRE (Fidgetin OS=Danio rerio GN=fign PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.647e-12
Identity = 57/220 (25.91%), Postives = 112/220 (50.91%), Query Frame = -1
Query:  242 ANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGF--DQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKH----GEIDYEAVVKLAEGFNGADLRNVCTEA------GM------SAIRAERDYVIHEDFMKAVRKLNEA---KKLESSAHYNADFG 838
            A FL +  SA++ K++GE  ++++  F  AR  QP ++F+ ++D +   + SE    +  + R   ELL QLDG        V ++ +T++P+ +D +L R     +++ +PLP+  +R +I+   +  +++H     + +   +V+  +GF+G D+  +C EA      GM        I  +   V ++DF     K+  +   K+L++   +N  FG
Sbjct:  523 AAFLLLSGSALVTKWLGEGEKIVQASFLIARCRQPSVVFISDVDLLLSSQLSE----ESPVNRIKSELLLQLDGVLSSPEEHVLVVCSTSKPEEIDESLRR--YFVKRLLVPLPDATARHQII---SQLLSQHNYCLSDKEVTLLVQRTDGFSGLDVVRLCQEALVGPLHGMPGADLSGMIPGQMRPVSYQDFENVFCKIQPSISQKELDTYTEWNKMFG 733          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: YCF46_GUITH (Uncharacterized AAA domain-containing protein ycf46 OS=Guillardia theta GN=ycf46 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.306e-11
Identity = 50/182 (27.47%), Postives = 85/182 (46.70%), Query Frame = -1
Query:  293 LKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEID-AIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEG--FNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKL 829
            LK+    +    IGES   +R+M  +A    PCI+++DEID A  G  F+  +   + +  T +  L+     ++   V ++   N  D L P LLR GR D    I LP+ + R  I K+H   I       Y+  +  A+   F+GA++     EA   A    R++    D + +++++
Sbjct:  304 LKLDVGRLFGGIIGESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNNDSGTTKRVFGTFITWLS-----EKKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLKERECIFKVHLKKIRPKSWSTYDTEILSAQSNRFSGAEIEESIYEAMHIAFNENREFTT-SDILNSLKRV 479          
BLAST of CF832525 vs. ExPASy Swiss-Prot
Match: Y4KL_RHISN (Uncharacterized AAA family ATPase y4kL OS=Rhizobium sp. (strain NGR234) GN=NGR_a02840 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.764e-11
Identity = 57/188 (30.32%), Postives = 87/188 (46.28%), Query Frame = -1
Query:  263 KVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMSAIRAERDYVIHEDFMKAVRKLNEAKKLESSA 826
            +V    +I  Y+GE+A  IR+ F +AR  QPC++F DE DA+   R   G     E++R +  LL  +D     G   +I ATN    LD A+ R  R D  +    P        LK+    +      D        EG++ A++  VCT+A  + I   R  V   DF +A++  +EA++    A
Sbjct:  148 RVKLDRLISSYLGETATNIRKTFEFARK-QPCVLFFDEFDALARTRDDSGEH--NELRRVVNSLLLFIDNMQPKGF--LIAATNLDRSLDAAIWR--RFDEVLWFDRPEAAMIGRFLKLKFKNVPV--AFDPARNSAALEGYSFAEIERVCTQAIKAMIIERRKQVQERDFNRALQ--DEARRRAGQA 324          
The following BLAST results are available for this feature:
BLAST of CF832525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
YCF46_ODOSI1.106e-1328.42Uncharacterized AAA domain-containing protein ycf4... [more]
FIGN_HUMAN1.445e-1326.82Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2[more]
FTSH_HELSJ3.218e-1325.99Cell division protease ftsH homolog OS=Helicospori... [more]
FTSH_CHLVU4.203e-1335.54Cell division protease ftsH homolog OS=Chlorella v... [more]
YR476_MIMIV9.364e-1326.19Putative AAA family ATPase R476 OS=Acanthamoeba po... [more]
SUR2_SCHPO2.086e-1230.29Protein sur2 OS=Schizosaccharomyces pombe GN=sur2 ... [more]
YCF2_MESVI3.558e-1228.00Protein ycf2 OS=Mesostigma viride GN=ycf2 PE=3 SV=... [more]
FIGN_DANRE4.647e-1225.91Fidgetin OS=Danio rerio GN=fign PE=2 SV=1[more]
YCF46_GUITH2.306e-1127.47Uncharacterized AAA domain-containing protein ycf4... [more]
Y4KL_RHISN8.764e-1130.32Uncharacterized AAA family ATPase y4kL OS=Rhizobiu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_02A01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa02A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832525 ID=CF832525; Name=CF832525; organism=Citrus sinensis; type=EST; length=838bp
TTTTTTTTTTTTTTTTTGAGAATCGGTGGAAATCACTGAAACCATCAATA
CATTAAAGATGTGCAACAATTTCTGACGTAAATGATTGTTATAATATATA
GAGCATTCCATCGCTCAAAGAACCACTAACTTCACAAATTAAAGCAAGAT
GTTTTAACAAAAATATGAAAACAATTACATCTGAAAAATAACCGCACTGC
CTCAAGATCCTTGGCTCTTTTCCTAAATGTTTTTACTCTTTTCCAAAATC
AGCATTGTAGTGAGCACTTGATTCAAGTTTCTTTGCCTCGTTCAGTTTCC
GGACAGCCTTCATAAAATCTTCGTGGATGACATAATCACGTTCAGCACGG
ATTGCCGACATTCCAGCCTCGGTGCAAACATTTCGGAGATCAGCCCCATT
AAAGCCCTCTGCAAGCTTCACAACAGCCTCATAATCAATCTCACCATGCT
TAGCAATGCCAGCAGCATGAATTTTAAGAATTTCCATTCTTGACTGCTCA
TTTGGCAATGGAATCTCAATTTTCCTATCCAGTCGCCCTGGACGAAGAAG
TGCAGGGTCAAGGACATCAGGTCTGTTAGTGGCCATTATCATTTTAACCT
TCCCAAGCTGATCAAATCCATCAAGCTGATTAAGTAACTCCATCAGTGTC
CTTTGAATTTCACGATCTGCACTGGTTCCTTCACTAAAACGGCGTCCACC
GATGGCATCAATTTCATCCATAAAAATGATGCAGGGTTGATGATCACGTG
CATATCCAAACATCTCTCTTATCAACCTTGCACTTTCCCCAATGTACTTA
TCAATAATGGCACTTGAAACCACCTTCAGAAAATTTGC
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